MELO3C026961 (gene) Melon (DHL92) v4

Overview


Name	MELO3C026961
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	RING-H2 finger protein ATL57-like
Location	chr11: 26727614 .. 26728276 (-)
RNA-Seq Expression	MELO3C026961
Synteny	MELO3C026961

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAACCCCAATTTTCCCACCGCAAGCTTCTTCTGGAAGCTTCCGATTACGTGAATCTACCATCCCCCGATCTTCCTCTTGAAGTTGAAACCACAACCCAAAATCCATCTTCTTCTCGTTCCTTCAAATTCTCCCAATTATTCCCACCCTTCAACCTGAAAACCGCCTTCATCCTCCTCACCCTCCTCCTCCTTTTCTTCCTCTTCACCATTTTTTCCATCTACATCCGCCGCTTCGCCGAACGCCGCTACCCTTTTCCACCGCCGCCCCTCCGGCCGCCGCATACGGCGGCGACTTCCTCTGCCAATGGTCTGGACCGGACCGTCGTTTGGTCGCTTCCGGTTTCTTCTTATCGTTGCGACGATAAGCTTCAAGTGGATTGTCCGATTTGTCTGAGCGAGTTTGAGGCGGGGGAGAGGGTTAAAACGATACCGTTCTGTCGACACGTGTTTCATCCTGATTGCATCGATAGGTGGCTGTTCTCGCACGTCTCTTGCCCCGTTTGCCGGTCGACGGAATTCGACGGGACGGCGTCAGGAGGAAGATGGACGGTGAGAGATGGTGACACGTGTGTGGAGGTTGGGACACGTGGCTTAAGGAGGAGCAGCAGTTGGTCCAACTTTGCTGGGAGAGGTTCCTTGGGAAGAACGCTGACTTTCTGA

mRNA sequence

ATGAAACCCCAATTTTCCCACCGCAAGCTTCTTCTGGAAGCTTCCGATTACGTGAATCTACCATCCCCCGATCTTCCTCTTGAAGTTGAAACCACAACCCAAAATCCATCTTCTTCTCGTTCCTTCAAATTCTCCCAATTATTCCCACCCTTCAACCTGAAAACCGCCTTCATCCTCCTCACCCTCCTCCTCCTTTTCTTCCTCTTCACCATTTTTTCCATCTACATCCGCCGCTTCGCCGAACGCCGCTACCCTTTTCCACCGCCGCCCCTCCGGCCGCCGCATACGGCGGCGACTTCCTCTGCCAATGGTCTGGACCGGACCGTCGTTTGGTCGCTTCCGGTTTCTTCTTATCGTTGCGACGATAAGCTTCAAGTGGATTGTCCGATTTGTCTGAGCGAGTTTGAGGCGGGGGAGAGGGTTAAAACGATACCGTTCTGTCGACACGTGTTTCATCCTGATTGCATCGATAGGTGGCTGTTCTCGCACGTCTCTTGCCCCGTTTGCCGGTCGACGGAATTCGACGGGACGGCGTCAGGAGGAAGATGGACGGTGAGAGATGGTGACACGTGTGTGGAGGTTGGGACACGTGGCTTAAGGAGGAGCAGCAGTTGGTCCAACTTTGCTGGGAGAGGTTCCTTGGGAAGAACGCTGACTTTCTGA

Coding sequence (CDS)

ATGAAACCCCAATTTTCCCACCGCAAGCTTCTTCTGGAAGCTTCCGATTACGTGAATCTACCATCCCCCGATCTTCCTCTTGAAGTTGAAACCACAACCCAAAATCCATCTTCTTCTCGTTCCTTCAAATTCTCCCAATTATTCCCACCCTTCAACCTGAAAACCGCCTTCATCCTCCTCACCCTCCTCCTCCTTTTCTTCCTCTTCACCATTTTTTCCATCTACATCCGCCGCTTCGCCGAACGCCGCTACCCTTTTCCACCGCCGCCCCTCCGGCCGCCGCATACGGCGGCGACTTCCTCTGCCAATGGTCTGGACCGGACCGTCGTTTGGTCGCTTCCGGTTTCTTCTTATCGTTGCGACGATAAGCTTCAAGTGGATTGTCCGATTTGTCTGAGCGAGTTTGAGGCGGGGGAGAGGGTTAAAACGATACCGTTCTGTCGACACGTGTTTCATCCTGATTGCATCGATAGGTGGCTGTTCTCGCACGTCTCTTGCCCCGTTTGCCGGTCGACGGAATTCGACGGGACGGCGTCAGGAGGAAGATGGACGGTGAGAGATGGTGACACGTGTGTGGAGGTTGGGACACGTGGCTTAAGGAGGAGCAGCAGTTGGTCCAACTTTGCTGGGAGAGGTTCCTTGGGAAGAACGCTGACTTTCTGA

Protein sequence

MKPQFSHRKLLLEASDYVNLPSPDLPLEVETTTQNPSSSRSFKFSQLFPPFNLKTAFILLTLLLLFFLFTIFSIYIRRFAERRYPFPPPPLRPPHTAATSSANGLDRTVVWSLPVSSYRCDDKLQVDCPICLSEFEAGERVKTIPFCRHVFHPDCIDRWLFSHVSCPVCRSTEFDGTASGGRWTVRDGDTCVEVGTRGLRRSSSWSNFAGRGSLGRTLTF

Homology

[Close]

BLAST of MELO3C026961 vs. ExPASy Swiss-Prot
Match: Q9SJJ7 (RING-H2 finger protein ATL57 OS=Arabidopsis thaliana OX=3702 GN=ATL57 PE=2 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 4.2e-20
Identity = 79/217 (36.41%), Postives = 102/217 (47.00%), Query Frame = 0


Query: 28  EVETTTQNPSSSRSFKFSQLFPPFNLKTAFILLTLLLLFFLFTI--FSIYIRRFAE---- 87
           E+  T QN +SS         PP  L +   L   +LL  LF +  FS+Y R FA+    
Sbjct: 21  ELTKTVQNVTSSPLTPTPPPQPPSALDSTMALTIFILLVALFFMGFFSVYFRHFADSSSS 80

Query: 88  ----RRYPFPPPPLRPPHTAATSSA--------NGLDRTVVWSLPVSSY-RCDDKLQVDC 147
                  P        P   +TS           GLD   V SLPV  Y +   +   DC
Sbjct: 81  TVDISSMPRTRSSRMSPRRLSTSVVVSRPYSFRRGLDSQAVRSLPVYRYTKAAKQRNEDC 140

Query: 148 PICLSEFEAGERVKTIPFCRHVFHPDCIDRWLFSHVSCPVCRSTEFDGTASGG------R 207
            ICLS+FE GE VK IP C HVFH DC+D WL S+V+CP+CRS +       G      +
Sbjct: 141 VICLSDFEEGETVKVIPHCGHVFHVDCVDTWLSSYVTCPLCRSNQLFSDKDLGMQEPPDQ 200

Query: 208 WTVRDGDTCVEVGTRGLRRSSSWSNFAGRGSLGRTLT 220
            +  + DTC  V T  +RR SS S+   R  L R+L+
Sbjct: 201 DSAEEHDTCDGVDT-CVRRCSSCSSLGQRTGLERSLS 236

[Close]

BLAST of MELO3C026961 vs. ExPASy Swiss-Prot
Match: Q8W571 (RING-H2 finger protein ATL32 OS=Arabidopsis thaliana OX=3702 GN=ATL32 PE=2 SV=3)

HSP 1 Score: 90.5 bits (223), Expect = 2.5e-17
Identity = 58/156 (37.18%), Postives = 81/156 (51.92%), Query Frame = 0


Query: 27  LEVETTTQNPSSSRSFKFSQLFPPFNLKTAF------ILLTLLLLFFLFTIFSIYIRRFA 86
           L V    Q+ ++++SF  S    P +L+T        +   L+ LFFL  + S+YIR  A
Sbjct: 16  LHVAIIIQSKANAQSFSPS----PPDLQTGHTPSKTTVFAVLVTLFFLTGLLSVYIRHCA 75

Query: 87  ERRYPFPPPPLRPPHTAATSSANGLDRTVVWSLPVSSYRC--DDKL---QVDCPICLSEF 146
                      R      +S   GLD  VV S PV +Y    + K+    ++C ICL+E 
Sbjct: 76  RSNPDSSTRYFRNRANDGSSRRGGLDNAVVESFPVFAYSSVKESKIGSKDLECAICLNEL 135

Query: 147 EAGERVKTIPFCRHVFHPDCIDRWLFSHVSCPVCRS 172
           E  E V+ +P C H+FH DCID WL+SH +CPVCRS
Sbjct: 136 EDHETVRLLPICNHLFHIDCIDTWLYSHATCPVCRS 167

[Close]

BLAST of MELO3C026961 vs. ExPASy Swiss-Prot
Match: Q84W40 (RING-H2 finger protein ATL11 OS=Arabidopsis thaliana OX=3702 GN=ATL11 PE=2 SV=2)

HSP 1 Score: 87.0 bits (214), Expect = 2.8e-16
Identity = 49/129 (37.98%), Postives = 72/129 (55.81%), Query Frame = 0


Query: 51  FNLKTAFILLTLLLLFFLFTIFSIYIRRFAERRYPFP-PPPLRPPHTAATS--SANGLDR 110
           F+   A +++ L+ +FF    FS+YIRR  ER        P    +  AT+   A GLD 
Sbjct: 59  FDPTMAILMIVLVSVFFFLGFFSVYIRRCLERVMGMDYGNPNDAGNWLATNRQQARGLDA 118

Query: 111 TVVWSLPVSSYRCDDKLQV-----DCPICLSEFEAGERVKTIPFCRHVFHPDCIDRWLFS 170
           +++ + P   Y     L++     +C +CL+EFE  E ++ IP C HVFHP CID WL S
Sbjct: 119 SIIETFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLRS 178

Query: 171 HVSCPVCRS 172
           H +CP+CR+
Sbjct: 179 HTTCPLCRA 187

[Close]

BLAST of MELO3C026961 vs. ExPASy Swiss-Prot
Match: Q8H7N9 (E3 ubiquitin-protein ligase Os03g0188200 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0188200 PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 3.7e-16
Identity = 50/135 (37.04%), Postives = 75/135 (55.56%), Query Frame = 0


Query: 51  FNLKTAFILLTLLLLFFLFTIFSIYIRRFAERRYP----FPPPPLRPP---HTAATSSAN 110
           F   T  +L+ L+  F L T+FS+ I R A+ R P    F       P     AA+ ++ 
Sbjct: 43  FTPTTVVVLVALITAFVLLTVFSVLINRCAQARAPPRRAFRSTASHQPVGGAAAASRASR 102

Query: 111 GLDRTVVWSLPVSSYRCDDKLQ-------VDCPICLSEFEAGERVKTIPFCRHVFHPDCI 170
           GLD+ VV + P + Y  D K +       ++C +CL+EF   + ++ +P C HVFHPDCI
Sbjct: 103 GLDKEVVEAFPTAVYG-DVKARMAAKSGPLECAVCLAEFADSDELRVLPACCHVFHPDCI 162

Query: 171 DRWLFSHVSCPVCRS 172
           D WL + V+CP+CR+
Sbjct: 163 DPWLAAAVTCPLCRA 176

[Close]

BLAST of MELO3C026961 vs. ExPASy Swiss-Prot
Match: Q8L9T5 (RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2)

HSP 1 Score: 81.6 bits (200), Expect = 1.2e-14
Identity = 51/155 (32.90%), Postives = 80/155 (51.61%), Query Frame = 0


Query: 26  PLEVETTTQNPSSSRSFKFSQLFPPFNLKTAFILLTLLLLFFLFTIFSI------YIRRF 85
           P+       N S S+++  S       +   F ++ L++   L+  + +      ++RR 
Sbjct: 8   PIPFRPEDNNFSGSKTYAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHLRRR 67

Query: 86  AERRYPFPPPPLRPPHTAATS--SANGLDRTVVWSLPVSSYRCD-DKLQVDCPICLSEFE 145
           +  R          P TAATS  ++ GLD  V+ SLPV ++  +  K  ++C +CLSEFE
Sbjct: 68  SRNRRATMVFFTADPSTAATSVVASRGLDPNVIKSLPVFTFSDETHKDPIECAVCLSEFE 127

Query: 146 AGERVKTIPFCRHVFHPDCIDRWLFSHVSCPVCRS 172
             E  + +P C+H FH DCID W  SH +CP+CRS
Sbjct: 128 ESETGRVLPNCQHTFHVDCIDMWFHSHSTCPLCRS 162

[Close]

BLAST of MELO3C026961 vs. NCBI nr
Match: XP_016903383.1 (PREDICTED: RING-H2 finger protein ATL57-like [Cucumis melo] >KAA0037295.1 RING-H2 finger protein ATL57-like [Cucumis melo var. makuwa] >TYK24189.1 RING-H2 finger protein ATL57-like [Cucumis melo var. makuwa])

HSP 1 Score: 454.1 bits (1167), Expect = 6.7e-124
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 1   MKPQFSHRKLLLEASDYVNLPSPDLPLEVETTTQNPSSSRSFKFSQLFPPFNLKTAFILL 60
           MKPQFSHRKLLLEASDYVNLPSPDLPLEVETTTQNPSSSRSFKFSQLFPPFNLKTAFILL
Sbjct: 1   MKPQFSHRKLLLEASDYVNLPSPDLPLEVETTTQNPSSSRSFKFSQLFPPFNLKTAFILL 60

Query: 61  TLLLLFFLFTIFSIYIRRFAERRYPFPPPPLRPPHTAATSSANGLDRTVVWSLPVSSYRC 120
           TLLLLFFLFTIFSIYIRRFAERRYPFPPPPLRPPHTAATSSANGLDRTVVWSLPVSSYRC
Sbjct: 61  TLLLLFFLFTIFSIYIRRFAERRYPFPPPPLRPPHTAATSSANGLDRTVVWSLPVSSYRC 120

Query: 121 DDKLQVDCPICLSEFEAGERVKTIPFCRHVFHPDCIDRWLFSHVSCPVCRSTEFDGTASG 180
           DDKLQVDCPICLSEFEAGERVKTIPFCRHVFHPDCIDRWLFSHVSCPVCRSTEFDGTASG
Sbjct: 121 DDKLQVDCPICLSEFEAGERVKTIPFCRHVFHPDCIDRWLFSHVSCPVCRSTEFDGTASG 180

Query: 181 GRWTVRDGDTCVEVGTRGLRRSSSWSNFAGRGSLGRTLTF 221
           GRWTVRDGDTCVEVGTRGLRRSSSWSNFAGRGSLGRTLTF
Sbjct: 181 GRWTVRDGDTCVEVGTRGLRRSSSWSNFAGRGSLGRTLTF 220

[Close]

BLAST of MELO3C026961 vs. NCBI nr
Match: KGN46895.1 (hypothetical protein Csa_020764 [Cucumis sativus])

HSP 1 Score: 246.9 bits (629), Expect = 1.6e-61
Identity = 126/145 (86.90%), Postives = 133/145 (91.72%), Query Frame = 0


Query: 1   MKPQFSHRKLLLEASDYVNLPSPDLPLEVETTTQNPSSSRSFKFSQLFPPFNLKTAFILL 60
           MKPQF HRKLLLEASDY+NLPSPD PLEVETTTQN SSS SFKFSQLFPPFNLKTAFILL
Sbjct: 1   MKPQFCHRKLLLEASDYMNLPSPDRPLEVETTTQNSSSSHSFKFSQLFPPFNLKTAFILL 60

Query: 61  TLLLLFFLFTIFSIYIRRFAERRYPFPPPP-LRPPHTAATSSANGLDRTVVWSLPVSSYR 120
            LLLLFFLFTIFSIYIRRFAERRYPFPPPP LRPPHTA++SSANG+DR VV SLPV +YR
Sbjct: 61  ILLLLFFLFTIFSIYIRRFAERRYPFPPPPLLRPPHTASSSSANGVDRAVVRSLPVFAYR 120

Query: 121 CDDKLQVDCPICLSEFEAGERVKTI 145
           CDDKLQVDCPICLSEFEA E+V  +
Sbjct: 121 CDDKLQVDCPICLSEFEAEEKVAVL 145

[Close]

BLAST of MELO3C026961 vs. NCBI nr
Match: RVX20100.1 (RING-H2 finger protein ATL57 [Vitis vinifera])

HSP 1 Score: 151.0 bits (380), Expect = 1.2e-32
Identity = 96/215 (44.65%), Postives = 118/215 (54.88%), Query Frame = 0


Query: 35  NPSSSRSFKFS-----QLFPPFNLKTAFILLTLLLLFFLFTIFSIYIRRFAE-------R 94
           NPSSS +  F      Q   PF+   A  ++ LL   F    FS+YIRRFAE       R
Sbjct: 129 NPSSSSTSGFKRSLNRQPNTPFDSSMALTVIVLLTALFFMGFFSVYIRRFAEDNAVEMSR 188

Query: 95  RYPFPPPPLRPPHTAATSSANGLDRTVVWSLPVSSYRCDDKLQVDCPICLSEFEAGERVK 154
           R   P PP      + T S  GLD T V SLP+ SY  D K  +DCP+CL++FE  + VK
Sbjct: 189 RRRHPNPPASSSSRSPTPS-KGLDATTVSSLPLFSYHGDAKETLDCPVCLTQFEDKDTVK 248

Query: 155 TIPFCRHVFHPDCIDRWLFSHVSCPVCRSTEF------------DGTASGG-----RWTV 214
            IP+CRHVFHP CID WL SHVSCPVCRST+             +G+  GG     R T 
Sbjct: 249 IIPYCRHVFHPPCIDTWLSSHVSCPVCRSTQLFPAKDGRCSVVQEGSDEGGSQSHERLTA 308

Query: 215 RDGDTCVEVGTRGLRRSSSWSNFAGRGSLGRTLTF 221
            DGDT VEV +  +RR++S S+   R  L RT +F
Sbjct: 309 DDGDTYVEVESLAVRRTTSCSSLGERALLHRTSSF 342

[Close]

BLAST of MELO3C026961 vs. NCBI nr
Match: XP_002273630.1 (PREDICTED: RING-H2 finger protein ATL57 [Vitis vinifera])

HSP 1 Score: 149.4 bits (376), Expect = 3.5e-32
Identity = 95/215 (44.19%), Postives = 118/215 (54.88%), Query Frame = 0


Query: 35  NPSSSRSFKFS-----QLFPPFNLKTAFILLTLLLLFFLFTIFSIYIRRFAE-------R 94
           NPSSS +  F      Q   PF+   A  ++ LL   F    FS+YIRRFAE       R
Sbjct: 31  NPSSSSTSGFKRSLNRQPNTPFDSSMALTVIVLLTALFFMGFFSVYIRRFAEDNAVEMSR 90

Query: 95  RYPFPPPPLRPPHTAATSSANGLDRTVVWSLPVSSYRCDDKLQVDCPICLSEFEAGERVK 154
           R   P PP      + T S  GLD + V SLP+ SY  D K  +DCP+CL++FE  + VK
Sbjct: 91  RRRHPNPPASSSSRSPTPS-KGLDASTVSSLPLFSYHGDAKETLDCPVCLTQFEDKDTVK 150

Query: 155 TIPFCRHVFHPDCIDRWLFSHVSCPVCRSTEF------------DGTASGG-----RWTV 214
            IP+CRHVFHP CID WL SHVSCPVCRST+             +G+  GG     R T 
Sbjct: 151 IIPYCRHVFHPPCIDTWLSSHVSCPVCRSTQLFPAKDGRCSVVQEGSDEGGSQSHERLTA 210

Query: 215 RDGDTCVEVGTRGLRRSSSWSNFAGRGSLGRTLTF 221
            DGDT VEV +  +RR++S S+   R  L RT +F
Sbjct: 211 DDGDTYVEVESLAVRRTTSCSSLGERALLHRTSSF 244

[Close]

BLAST of MELO3C026961 vs. NCBI nr
Match: XP_021278965.1 (RING-H2 finger protein ATL57 [Herrania umbratica])

HSP 1 Score: 146.0 bits (367), Expect = 3.9e-31
Identity = 105/252 (41.67%), Postives = 129/252 (51.19%), Query Frame = 0


Query: 4   QFSHRKLLL---EASDYVNLPSPDL----PLEVETTTQNPSSSRSFKFSQLFPPFNLKTA 63
           +F  RKL L         +LPSP L    P+   +T+   SSS+  K SQ  PPF+   A
Sbjct: 2   KFYSRKLFLYDDPPFSTTSLPSPPLHHHRPVNTNSTSSPLSSSK--KLSQQNPPFDSSMA 61

Query: 64  FILLTLLLLFFLFTIFSIYIRRFAE---------RRYP---FPPPPLRPPHTAATSSANG 123
             ++ LL   F    FSIYIRRF+E         RRY         L       ++   G
Sbjct: 62  LTIVVLLTALFFMGFFSIYIRRFSEEPTAHLSRRRRYRGGLLDTLSLPSDRHHVSTPRKG 121

Query: 124 LDRTVVWSLPVSSYRCDDKLQVDCPICLSEFEAGERVKTIPFCRHVFHPDCIDRWLFSHV 183
           LD T V SLPV SY  D K Q+DC ICLSEFE  E VKTIP C+HVFH +CID WL SHV
Sbjct: 122 LDPTTVGSLPVYSYHGDAKYQIDCAICLSEFEEKECVKTIPCCKHVFHVECIDTWLTSHV 181

Query: 184 SCPVCRSTE-FDGTASGGRWTVRD--------------GDTCVEVGTRG-LRRSSSWSNF 221
           SCPVCR T  F+    GG   +++               DTC+ +GT   +RR+SS    
Sbjct: 182 SCPVCRGTRLFEIKGGGGEGVMQERIDQGRSQSSAVSIDDTCMVMGTTSRVRRASSCPRL 241

[Close]

BLAST of MELO3C026961 vs. ExPASy TrEMBL
Match: A0A5A7T753 (RING-H2 finger protein ATL57-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1754G00230 PE=4 SV=1)

HSP 1 Score: 454.1 bits (1167), Expect = 3.2e-124
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 1   MKPQFSHRKLLLEASDYVNLPSPDLPLEVETTTQNPSSSRSFKFSQLFPPFNLKTAFILL 60
           MKPQFSHRKLLLEASDYVNLPSPDLPLEVETTTQNPSSSRSFKFSQLFPPFNLKTAFILL
Sbjct: 1   MKPQFSHRKLLLEASDYVNLPSPDLPLEVETTTQNPSSSRSFKFSQLFPPFNLKTAFILL 60

Query: 61  TLLLLFFLFTIFSIYIRRFAERRYPFPPPPLRPPHTAATSSANGLDRTVVWSLPVSSYRC 120
           TLLLLFFLFTIFSIYIRRFAERRYPFPPPPLRPPHTAATSSANGLDRTVVWSLPVSSYRC
Sbjct: 61  TLLLLFFLFTIFSIYIRRFAERRYPFPPPPLRPPHTAATSSANGLDRTVVWSLPVSSYRC 120

Query: 121 DDKLQVDCPICLSEFEAGERVKTIPFCRHVFHPDCIDRWLFSHVSCPVCRSTEFDGTASG 180
           DDKLQVDCPICLSEFEAGERVKTIPFCRHVFHPDCIDRWLFSHVSCPVCRSTEFDGTASG
Sbjct: 121 DDKLQVDCPICLSEFEAGERVKTIPFCRHVFHPDCIDRWLFSHVSCPVCRSTEFDGTASG 180

Query: 181 GRWTVRDGDTCVEVGTRGLRRSSSWSNFAGRGSLGRTLTF 221
           GRWTVRDGDTCVEVGTRGLRRSSSWSNFAGRGSLGRTLTF
Sbjct: 181 GRWTVRDGDTCVEVGTRGLRRSSSWSNFAGRGSLGRTLTF 220

[Close]

BLAST of MELO3C026961 vs. ExPASy TrEMBL
Match: A0A1S4E570 (RING-H2 finger protein ATL57-like OS=Cucumis melo OX=3656 GN=LOC107992155 PE=4 SV=1)

HSP 1 Score: 454.1 bits (1167), Expect = 3.2e-124
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 1   MKPQFSHRKLLLEASDYVNLPSPDLPLEVETTTQNPSSSRSFKFSQLFPPFNLKTAFILL 60
           MKPQFSHRKLLLEASDYVNLPSPDLPLEVETTTQNPSSSRSFKFSQLFPPFNLKTAFILL
Sbjct: 1   MKPQFSHRKLLLEASDYVNLPSPDLPLEVETTTQNPSSSRSFKFSQLFPPFNLKTAFILL 60

Query: 61  TLLLLFFLFTIFSIYIRRFAERRYPFPPPPLRPPHTAATSSANGLDRTVVWSLPVSSYRC 120
           TLLLLFFLFTIFSIYIRRFAERRYPFPPPPLRPPHTAATSSANGLDRTVVWSLPVSSYRC
Sbjct: 61  TLLLLFFLFTIFSIYIRRFAERRYPFPPPPLRPPHTAATSSANGLDRTVVWSLPVSSYRC 120

Query: 121 DDKLQVDCPICLSEFEAGERVKTIPFCRHVFHPDCIDRWLFSHVSCPVCRSTEFDGTASG 180
           DDKLQVDCPICLSEFEAGERVKTIPFCRHVFHPDCIDRWLFSHVSCPVCRSTEFDGTASG
Sbjct: 121 DDKLQVDCPICLSEFEAGERVKTIPFCRHVFHPDCIDRWLFSHVSCPVCRSTEFDGTASG 180

Query: 181 GRWTVRDGDTCVEVGTRGLRRSSSWSNFAGRGSLGRTLTF 221
           GRWTVRDGDTCVEVGTRGLRRSSSWSNFAGRGSLGRTLTF
Sbjct: 181 GRWTVRDGDTCVEVGTRGLRRSSSWSNFAGRGSLGRTLTF 220

[Close]

BLAST of MELO3C026961 vs. ExPASy TrEMBL
Match: A0A0A0KAY2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G149360 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 7.9e-62
Identity = 126/145 (86.90%), Postives = 133/145 (91.72%), Query Frame = 0


Query: 1   MKPQFSHRKLLLEASDYVNLPSPDLPLEVETTTQNPSSSRSFKFSQLFPPFNLKTAFILL 60
           MKPQF HRKLLLEASDY+NLPSPD PLEVETTTQN SSS SFKFSQLFPPFNLKTAFILL
Sbjct: 1   MKPQFCHRKLLLEASDYMNLPSPDRPLEVETTTQNSSSSHSFKFSQLFPPFNLKTAFILL 60

Query: 61  TLLLLFFLFTIFSIYIRRFAERRYPFPPPP-LRPPHTAATSSANGLDRTVVWSLPVSSYR 120
            LLLLFFLFTIFSIYIRRFAERRYPFPPPP LRPPHTA++SSANG+DR VV SLPV +YR
Sbjct: 61  ILLLLFFLFTIFSIYIRRFAERRYPFPPPPLLRPPHTASSSSANGVDRAVVRSLPVFAYR 120

Query: 121 CDDKLQVDCPICLSEFEAGERVKTI 145
           CDDKLQVDCPICLSEFEA E+V  +
Sbjct: 121 CDDKLQVDCPICLSEFEAEEKVAVL 145

[Close]

BLAST of MELO3C026961 vs. ExPASy TrEMBL
Match: A0A438KFZ0 (RING-H2 finger protein ATL57 OS=Vitis vinifera OX=29760 GN=ATL57 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 5.9e-33
Identity = 96/215 (44.65%), Postives = 118/215 (54.88%), Query Frame = 0


Query: 35  NPSSSRSFKFS-----QLFPPFNLKTAFILLTLLLLFFLFTIFSIYIRRFAE-------R 94
           NPSSS +  F      Q   PF+   A  ++ LL   F    FS+YIRRFAE       R
Sbjct: 129 NPSSSSTSGFKRSLNRQPNTPFDSSMALTVIVLLTALFFMGFFSVYIRRFAEDNAVEMSR 188

Query: 95  RYPFPPPPLRPPHTAATSSANGLDRTVVWSLPVSSYRCDDKLQVDCPICLSEFEAGERVK 154
           R   P PP      + T S  GLD T V SLP+ SY  D K  +DCP+CL++FE  + VK
Sbjct: 189 RRRHPNPPASSSSRSPTPS-KGLDATTVSSLPLFSYHGDAKETLDCPVCLTQFEDKDTVK 248

Query: 155 TIPFCRHVFHPDCIDRWLFSHVSCPVCRSTEF------------DGTASGG-----RWTV 214
            IP+CRHVFHP CID WL SHVSCPVCRST+             +G+  GG     R T 
Sbjct: 249 IIPYCRHVFHPPCIDTWLSSHVSCPVCRSTQLFPAKDGRCSVVQEGSDEGGSQSHERLTA 308

Query: 215 RDGDTCVEVGTRGLRRSSSWSNFAGRGSLGRTLTF 221
            DGDT VEV +  +RR++S S+   R  L RT +F
Sbjct: 309 DDGDTYVEVESLAVRRTTSCSSLGERALLHRTSSF 342

[Close]

BLAST of MELO3C026961 vs. ExPASy TrEMBL
Match: A0A6J0ZW96 (RING-H2 finger protein ATL57 OS=Herrania umbratica OX=108875 GN=LOC110412688 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 1.9e-31
Identity = 105/252 (41.67%), Postives = 129/252 (51.19%), Query Frame = 0


Query: 4   QFSHRKLLL---EASDYVNLPSPDL----PLEVETTTQNPSSSRSFKFSQLFPPFNLKTA 63
           +F  RKL L         +LPSP L    P+   +T+   SSS+  K SQ  PPF+   A
Sbjct: 2   KFYSRKLFLYDDPPFSTTSLPSPPLHHHRPVNTNSTSSPLSSSK--KLSQQNPPFDSSMA 61

Query: 64  FILLTLLLLFFLFTIFSIYIRRFAE---------RRYP---FPPPPLRPPHTAATSSANG 123
             ++ LL   F    FSIYIRRF+E         RRY         L       ++   G
Sbjct: 62  LTIVVLLTALFFMGFFSIYIRRFSEEPTAHLSRRRRYRGGLLDTLSLPSDRHHVSTPRKG 121

Query: 124 LDRTVVWSLPVSSYRCDDKLQVDCPICLSEFEAGERVKTIPFCRHVFHPDCIDRWLFSHV 183
           LD T V SLPV SY  D K Q+DC ICLSEFE  E VKTIP C+HVFH +CID WL SHV
Sbjct: 122 LDPTTVGSLPVYSYHGDAKYQIDCAICLSEFEEKECVKTIPCCKHVFHVECIDTWLTSHV 181

Query: 184 SCPVCRSTE-FDGTASGGRWTVRD--------------GDTCVEVGTRG-LRRSSSWSNF 221
           SCPVCR T  F+    GG   +++               DTC+ +GT   +RR+SS    
Sbjct: 182 SCPVCRGTRLFEIKGGGGEGVMQERIDQGRSQSSAVSIDDTCMVMGTTSRVRRASSCPRL 241

[Close]

BLAST of MELO3C026961 vs. TAIR 10
Match: AT2G27940.1 (RING/U-box superfamily protein )

HSP 1 Score: 99.8 bits (247), Expect = 3.0e-21
Identity = 79/217 (36.41%), Postives = 102/217 (47.00%), Query Frame = 0


Query: 28  EVETTTQNPSSSRSFKFSQLFPPFNLKTAFILLTLLLLFFLFTI--FSIYIRRFAE---- 87
           E+  T QN +SS         PP  L +   L   +LL  LF +  FS+Y R FA+    
Sbjct: 21  ELTKTVQNVTSSPLTPTPPPQPPSALDSTMALTIFILLVALFFMGFFSVYFRHFADSSSS 80

Query: 88  ----RRYPFPPPPLRPPHTAATSSA--------NGLDRTVVWSLPVSSY-RCDDKLQVDC 147
                  P        P   +TS           GLD   V SLPV  Y +   +   DC
Sbjct: 81  TVDISSMPRTRSSRMSPRRLSTSVVVSRPYSFRRGLDSQAVRSLPVYRYTKAAKQRNEDC 140

Query: 148 PICLSEFEAGERVKTIPFCRHVFHPDCIDRWLFSHVSCPVCRSTEFDGTASGG------R 207
            ICLS+FE GE VK IP C HVFH DC+D WL S+V+CP+CRS +       G      +
Sbjct: 141 VICLSDFEEGETVKVIPHCGHVFHVDCVDTWLSSYVTCPLCRSNQLFSDKDLGMQEPPDQ 200

Query: 208 WTVRDGDTCVEVGTRGLRRSSSWSNFAGRGSLGRTLT 220
            +  + DTC  V T  +RR SS S+   R  L R+L+
Sbjct: 201 DSAEEHDTCDGVDT-CVRRCSSCSSLGQRTGLERSLS 236

[Close]

BLAST of MELO3C026961 vs. TAIR 10
Match: AT4G40070.1 (RING/U-box superfamily protein )

HSP 1 Score: 90.5 bits (223), Expect = 1.8e-18
Identity = 58/156 (37.18%), Postives = 81/156 (51.92%), Query Frame = 0


Query: 27  LEVETTTQNPSSSRSFKFSQLFPPFNLKTAF------ILLTLLLLFFLFTIFSIYIRRFA 86
           L V    Q+ ++++SF  S    P +L+T        +   L+ LFFL  + S+YIR  A
Sbjct: 16  LHVAIIIQSKANAQSFSPS----PPDLQTGHTPSKTTVFAVLVTLFFLTGLLSVYIRHCA 75

Query: 87  ERRYPFPPPPLRPPHTAATSSANGLDRTVVWSLPVSSYRC--DDKL---QVDCPICLSEF 146
                      R      +S   GLD  VV S PV +Y    + K+    ++C ICL+E 
Sbjct: 76  RSNPDSSTRYFRNRANDGSSRRGGLDNAVVESFPVFAYSSVKESKIGSKDLECAICLNEL 135

Query: 147 EAGERVKTIPFCRHVFHPDCIDRWLFSHVSCPVCRS 172
           E  E V+ +P C H+FH DCID WL+SH +CPVCRS
Sbjct: 136 EDHETVRLLPICNHLFHIDCIDTWLYSHATCPVCRS 167

[Close]

BLAST of MELO3C026961 vs. TAIR 10
Match: AT1G72200.1 (RING/U-box superfamily protein )

HSP 1 Score: 87.0 bits (214), Expect = 2.0e-17
Identity = 49/129 (37.98%), Postives = 72/129 (55.81%), Query Frame = 0


Query: 51  FNLKTAFILLTLLLLFFLFTIFSIYIRRFAERRYPFP-PPPLRPPHTAATS--SANGLDR 110
           F+   A +++ L+ +FF    FS+YIRR  ER        P    +  AT+   A GLD 
Sbjct: 59  FDPTMAILMIVLVSVFFFLGFFSVYIRRCLERVMGMDYGNPNDAGNWLATNRQQARGLDA 118

Query: 111 TVVWSLPVSSYRCDDKLQV-----DCPICLSEFEAGERVKTIPFCRHVFHPDCIDRWLFS 170
           +++ + P   Y     L++     +C +CL+EFE  E ++ IP C HVFHP CID WL S
Sbjct: 119 SIIETFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLRS 178

Query: 171 HVSCPVCRS 172
           H +CP+CR+
Sbjct: 179 HTTCPLCRA 187

[Close]

BLAST of MELO3C026961 vs. TAIR 10
Match: AT3G16720.1 (TOXICOS EN LEVADURA 2 )

HSP 1 Score: 81.6 bits (200), Expect = 8.4e-16
Identity = 51/155 (32.90%), Postives = 80/155 (51.61%), Query Frame = 0


Query: 26  PLEVETTTQNPSSSRSFKFSQLFPPFNLKTAFILLTLLLLFFLFTIFSI------YIRRF 85
           P+       N S S+++  S       +   F ++ L++   L+  + +      ++RR 
Sbjct: 8   PIPFRPEDNNFSGSKTYAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHLRRR 67

Query: 86  AERRYPFPPPPLRPPHTAATS--SANGLDRTVVWSLPVSSYRCD-DKLQVDCPICLSEFE 145
           +  R          P TAATS  ++ GLD  V+ SLPV ++  +  K  ++C +CLSEFE
Sbjct: 68  SRNRRATMVFFTADPSTAATSVVASRGLDPNVIKSLPVFTFSDETHKDPIECAVCLSEFE 127

Query: 146 AGERVKTIPFCRHVFHPDCIDRWLFSHVSCPVCRS 172
             E  + +P C+H FH DCID W  SH +CP+CRS
Sbjct: 128 ESETGRVLPNCQHTFHVDCIDMWFHSHSTCPLCRS 162

[Close]

BLAST of MELO3C026961 vs. TAIR 10
Match: AT3G05200.1 (RING/U-box superfamily protein )

HSP 1 Score: 80.9 bits (198), Expect = 1.4e-15
Identity = 58/172 (33.72%), Postives = 85/172 (49.42%), Query Frame = 0


Query: 20  LPSPDLPLEVETTTQNPSSSRSFKFSQLFPPFNLKTAFILLTLLLLFFLFTIFSIYIRRF 79
           L S DL     + +Q   +++ + + +L P      A I++ L+   F    FSIY R  
Sbjct: 21  LSSADL---AASQSQPGPTNQPYNYGRLSPAM----AVIVVILIAALFFMGFFSIYFRHC 80

Query: 80  AERRYPFPPPPLRP-----PHTAATSSANGLDRTVVWSLPVSSYRCDDKLQ------VDC 139
           +      P   + P           ++A GLD +VV + P   Y  D K Q      ++C
Sbjct: 81  S----GVPDAGVSPAGGARSRATVNAAARGLDVSVVETFPTFLY-SDVKTQKLGKGELEC 140

Query: 140 PICLSEFEAGERVKTIPFCRHVFHPDCIDRWLFSHVSCPVCRSTEFDGTASG 181
            ICL+EFE  E ++ +P C HVFHP CID WL +HV+CPVCR+   +  A G
Sbjct: 141 AICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCRANLAEQVAEG 180

The following BLAST results are available for this feature:

BLAST of MELO3C026961 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJJ7	4.2e-20	36.41	RING-H2 finger protein ATL57 OS=Arabidopsis thaliana OX=3702 GN=ATL57 PE=2 SV=1	[more]
Q8W571	2.5e-17	37.18	RING-H2 finger protein ATL32 OS=Arabidopsis thaliana OX=3702 GN=ATL32 PE=2 SV=3	[more]
Q84W40	2.8e-16	37.98	RING-H2 finger protein ATL11 OS=Arabidopsis thaliana OX=3702 GN=ATL11 PE=2 SV=2	[more]
Q8H7N9	3.7e-16	37.04	E3 ubiquitin-protein ligase Os03g0188200 OS=Oryza sativa subsp. japonica OX=3994...	[more]
Q8L9T5	1.2e-14	32.90	RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2	[more]

BLAST of MELO3C026961 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016903383.1	6.7e-124	100.00	PREDICTED: RING-H2 finger protein ATL57-like [Cucumis melo] >KAA0037295.1 RING-H...	[more]
KGN46895.1	1.6e-61	86.90	hypothetical protein Csa_020764 [Cucumis sativus]	[more]
RVX20100.1	1.2e-32	44.65	RING-H2 finger protein ATL57 [Vitis vinifera]	[more]
XP_002273630.1	3.5e-32	44.19	PREDICTED: RING-H2 finger protein ATL57 [Vitis vinifera]	[more]
XP_021278965.1	3.9e-31	41.67	RING-H2 finger protein ATL57 [Herrania umbratica]	[more]

BLAST of MELO3C026961 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T753	3.2e-124	100.00	RING-H2 finger protein ATL57-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S4E570	3.2e-124	100.00	RING-H2 finger protein ATL57-like OS=Cucumis melo OX=3656 GN=LOC107992155 PE=4 S...	[more]
A0A0A0KAY2	7.9e-62	86.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G149360 PE=4 SV=1	[more]
A0A438KFZ0	5.9e-33	44.65	RING-H2 finger protein ATL57 OS=Vitis vinifera OX=29760 GN=ATL57 PE=4 SV=1	[more]
A0A6J0ZW96	1.9e-31	41.67	RING-H2 finger protein ATL57 OS=Herrania umbratica OX=108875 GN=LOC110412688 PE=...	[more]

BLAST of MELO3C026961 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G27940.1	3.0e-21	36.41	RING/U-box superfamily protein	[more]
AT4G40070.1	1.8e-18	37.18	RING/U-box superfamily protein	[more]
AT1G72200.1	2.0e-17	37.98	RING/U-box superfamily protein	[more]
AT3G16720.1	8.4e-16	32.90	TOXICOS EN LEVADURA 2	[more]
AT3G05200.1	1.4e-15	33.72	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 128..169 e-value: 5.1E-6 score: 36.0
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 127..170 e-value: 1.1E-12 score: 48.1
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 128..170 score: 12.297489
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 94..173 e-value: 1.5E-19 score: 71.5
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 28..185
None	No IPR available	PANTHER	PTHR14155:SF296	RING-H2 FINGER PROTEIN ATL57	coord: 28..185
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 127..170 e-value: 1.4046E-16 score: 68.8677
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 122..172

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C026961.1	MELO3C026961.1	mRNA