Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTCTTGAGTTATTTGAACCACCAAAAAAGTACTTATGGGTTCATAGAACCACAATGTAGTGATTGAAATGTCACCACAAACGCAAAGGAAAGATGAAGATGGGGCCTTTGGGCTTGGCTGTCATATGCATCGGCTAATATGAGCAAATATCATTGCCACAACATTCATATCCAAATCTCTTGTGTGGACTTGGCAAAAGAGCTTCAAGAATACTTCATATCCGAATCTCTTGTGCGATCCTCAACAAACACAGCAGTCACTAATTCAACAATGGCCGCAAAATTCCCTCTTTCTTCTTCCCTTACCGTCAAATTTCCTCTCCAACAAAACCCTTCTTCTTCCTTCTTCCCTCCTCTTCCTTCCCCTTTCTCCTCGCCAAAGCTTAGGCCAACGCCTTCTTCTCGCTTCAAGCTTCTAGCAAATTTAGGTAAAAAAGAGCATTTACTTTTGCTTAGATCTGCGACTCATTCTTGCTGTGCTTTTGTGTATATATATTGATGCCTTTTATTTATAGGGGGTGGCGATGCAGAAATCAAGAAGGGAGGGAAGAAAAAATTTATAACTAAAGAAGAGGAACCAGAGCAGTAAACAATTTTTTTCCCTTTTCTGTTTTCCTTTTTCTGGTATCAGAATGTTCAACAATTTGAGTGGAAATACAAGAAGATAATTATCAAATACCAAGCTCAAAATCTGATTGGATTTGGTGGTGTAGGTATTGGCAAACAGCAGGGGAAAGGGAAGGGGAGAATCCTATGAAGACTCCTCTTCCTTATATCATCATCTTCGGTATGTCGACTCCGTTCGTGATCTTAGCCATAGCTTTCGCCAATGGTTGGGTTAAAGTTCCTGTGAGATGAATCTGTACAAACTCATTGTGCAAATGCAAATGCCAAGGGAACAACACCATGAGAGTAACCTGAGATCTTCCACAGCGCACAAAACCCTCTGTTTATGCCTGTTTTGAGTTGTAATGTTATTTCAGAAGCTAATACAAAGTATAGTAACTCAGTTCCTTTTCGTTGTTTTGTGTGTTTGGATTCTTTATACCTCCATTTCAATACAAGTATTTGTTGTTGGTA
mRNA sequence
CTTCTTGAGTTATTTGAACCACCAAAAAAGTACTTATGGGTTCATAGAACCACAATGTAGTGATTGAAATGTCACCACAAACGCAAAGGAAAGATGAAGATGGGGCCTTTGGGCTTGGCTGTCATATGCATCGGCTAATATGAGCAAATATCATTGCCACAACATTCATATCCAAATCTCTTGTGTGGACTTGGCAAAAGAGCTTCAAGAATACTTCATATCCGAATCTCTTGTGCGATCCTCAACAAACACAGCAGTCACTAATTCAACAATGGCCGCAAAATTCCCTCTTTCTTCTTCCCTTACCGTCAAATTTCCTCTCCAACAAAACCCTTCTTCTTCCTTCTTCCCTCCTCTTCCTTCCCCTTTCTCCTCGCCAAAGCTTAGGCCAACGCCTTCTTCTCGCTTCAAGCTTCTAGCAAATTTAGGGGGTGGCGATGCAGAAATCAAGAAGGGAGGGAAGAAAAAATTTATAACTAAAGAAGAGGAACCAGAGCAGTAAACAATTTTTTTCCCTTTTCTGTTTTCCTTTTTCTGGTATCAGAATGTTCAACAATTTGAGTGGAAATACAAGAAGATAATTATCAAATACCAAGCTCAAAATCTGATTGGATTTGGTGGTGTAGGTATTGGCAAACAGCAGGGGAAAGGGAAGGGGAGAATCCTATGAAGACTCCTCTTCCTTATATCATCATCTTCGGTATGTCGACTCCGTTCGTGATCTTAGCCATAGCTTTCGCCAATGGTTGGGTTAAAGTTCCTGTGAGATGAATCTGTACAAACTCATTGTGCAAATGCAAATGCCAAGGGAACAACACCATGAGAGTAACCTGAGATCTTCCACAGCGCACAAAACCCTCTGTTTATGCCTGTTTTGAGTTGTAATGTTATTTCAGAAGCTAATACAAAGTATAGTAACTCAGTTCCTTTTCGTTGTTTTGTGTGTTTGGATTCTTTATACCTCCATTTCAATACAAGTATTTGTTGTTGGTA
Coding sequence (CDS)
ATGAGCAAATATCATTGCCACAACATTCATATCCAAATCTCTTGTGTGGACTTGGCAAAAGAGCTTCAAGAATACTTCATATCCGAATCTCTTGTGCGATCCTCAACAAACACAGCAGTCACTAATTCAACAATGGCCGCAAAATTCCCTCTTTCTTCTTCCCTTACCGTCAAATTTCCTCTCCAACAAAACCCTTCTTCTTCCTTCTTCCCTCCTCTTCCTTCCCCTTTCTCCTCGCCAAAGCTTAGGCCAACGCCTTCTTCTCGCTTCAAGCTTCTAGCAAATTTAGGGGGTGGCGATGCAGAAATCAAGAAGGGAGGGAAGAAAAAATTTATAACTAAAGAAGAGGAACCAGAGCAGTAA
Protein sequence
MSKYHCHNIHIQISCVDLAKELQEYFISESLVRSSTNTAVTNSTMAAKFPLSSSLTVKFPLQQNPSSSFFPPLPSPFSSPKLRPTPSSRFKLLANLGGGDAEIKKGGKKKFITKEEEPEQ
Homology
BLAST of MELO3C025961 vs. NCBI nr
Match:
XP_008464165.1 (PREDICTED: uncharacterized protein LOC103502113 [Cucumis melo] >KAA0060798.1 uncharacterized protein E6C27_scaffold137G00170 [Cucumis melo var. makuwa] >TYK11961.1 uncharacterized protein E5676_scaffold177G001450 [Cucumis melo var. makuwa])
HSP 1 Score: 232.3 bits (591), Expect = 2.3e-57
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0
Query: 1 MSKYHCHNIHIQISCVDLAKELQEYFISESLVRSSTNTAVTNSTMAAKFPLSSSLTVKFP 60
MSKYHCHNIHIQISCVDLAKELQEYFISESLVRSSTNTAVTNSTMAAKFPLSSSLTVKFP
Sbjct: 1 MSKYHCHNIHIQISCVDLAKELQEYFISESLVRSSTNTAVTNSTMAAKFPLSSSLTVKFP 60
Query: 61 LQQNPSSSFFPPLPSPFSSPKLRPTPSSRFKLLANLGGGDAEIKKGGKKKFITKEEEPEQ 120
LQQNPSSSFFPPLPSPFSSPKLRPTPSSRFKLLANLGGGDAEIKKGGKKKFITKEEEPEQ
Sbjct: 61 LQQNPSSSFFPPLPSPFSSPKLRPTPSSRFKLLANLGGGDAEIKKGGKKKFITKEEEPEQ 120
BLAST of MELO3C025961 vs. NCBI nr
Match:
XP_004140001.1 (uncharacterized protein LOC101219556 [Cucumis sativus] >KGN46605.1 hypothetical protein Csa_005653 [Cucumis sativus])
HSP 1 Score: 147.1 bits (370), Expect = 9.5e-32
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 0
Query: 45 MAAKFPLSSSLTVKFPLQQNPSSSFFPPLPSPFSSPKLRPTPSSRFKLLANLGGGDAEIK 104
MAAKFPLSSSLT+KFPLQQNPSSSFFPPLPSPFSSPKLRPTPSSRFKLLANLGGGDAEIK
Sbjct: 1 MAAKFPLSSSLTIKFPLQQNPSSSFFPPLPSPFSSPKLRPTPSSRFKLLANLGGGDAEIK 60
Query: 105 KGGKKKFITKEEEPEQ 121
KGGKKKFITKEEEPEQ
Sbjct: 61 KGGKKKFITKEEEPEQ 76
BLAST of MELO3C025961 vs. NCBI nr
Match:
XP_038902667.1 (uncharacterized protein LOC120089303 [Benincasa hispida])
HSP 1 Score: 114.4 bits (285), Expect = 6.9e-22
Identity = 64/76 (84.21%), Postives = 66/76 (86.84%), Query Frame = 0
Query: 45 MAAKFPLSSSLTVKFPLQQNPSSSFFPPLPSPFSSPKLRPTPSSRFKLLANLGGGDAEIK 104
MA K PLSSSLT+KFPLQQ+P SSFF PLP PFS PK RP P SRFKLLANLGGGDAEIK
Sbjct: 1 MAVKVPLSSSLTIKFPLQQSP-SSFFSPLPCPFSLPKPRPMP-SRFKLLANLGGGDAEIK 60
Query: 105 KGGKKKFITKEEEPEQ 121
KG KKKFITKEEEPEQ
Sbjct: 61 KGAKKKFITKEEEPEQ 74
BLAST of MELO3C025961 vs. NCBI nr
Match:
XP_022140463.1 (uncharacterized protein LOC111011130 [Momordica charantia])
HSP 1 Score: 106.7 bits (265), Expect = 1.4e-19
Identity = 63/78 (80.77%), Postives = 68/78 (87.18%), Query Frame = 0
Query: 45 MAAKFPLSSSLTVKFPLQQNPSSSFFPPLPSPFSSPKLRP-TPSSRFKLLANLGGGDAEI 104
MAAKF LSSSLT+KFPLQQNP SSFF PLPS SSP +P + +SRFKL+ANLGGGDAEI
Sbjct: 1 MAAKFALSSSLTIKFPLQQNP-SSFFAPLPSGLSSPNPKPKSRASRFKLVANLGGGDAEI 60
Query: 105 KK-GGKKKFITKEEEPEQ 121
KK GGKKKFITKEEEPEQ
Sbjct: 61 KKGGGKKKFITKEEEPEQ 77
BLAST of MELO3C025961 vs. NCBI nr
Match:
XP_023534591.1 (uncharacterized protein LOC111796124 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 105.1 bits (261), Expect = 4.2e-19
Identity = 62/79 (78.48%), Postives = 69/79 (87.34%), Query Frame = 0
Query: 45 MAAKFPLSSSL-TVKFPLQQNPSSSFFPPLP-SPFSSPKLRPTP-SSRFKLLANLGGGDA 104
MAAKFPLSSSL T+KFPLQQNP S FF PLP + FS P+ RPTP +S+FKLLAN GGGDA
Sbjct: 1 MAAKFPLSSSLTTIKFPLQQNP-SPFFAPLPCTTFSPPQPRPTPRASQFKLLANSGGGDA 60
Query: 105 EIKKGGKKKFITKEEEPEQ 121
E+KKGGKKKFITKE+EPEQ
Sbjct: 61 EVKKGGKKKFITKEQEPEQ 78
BLAST of MELO3C025961 vs. ExPASy TrEMBL
Match:
A0A5D3CJG8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold177G001450 PE=4 SV=1)
HSP 1 Score: 232.3 bits (591), Expect = 1.1e-57
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0
Query: 1 MSKYHCHNIHIQISCVDLAKELQEYFISESLVRSSTNTAVTNSTMAAKFPLSSSLTVKFP 60
MSKYHCHNIHIQISCVDLAKELQEYFISESLVRSSTNTAVTNSTMAAKFPLSSSLTVKFP
Sbjct: 1 MSKYHCHNIHIQISCVDLAKELQEYFISESLVRSSTNTAVTNSTMAAKFPLSSSLTVKFP 60
Query: 61 LQQNPSSSFFPPLPSPFSSPKLRPTPSSRFKLLANLGGGDAEIKKGGKKKFITKEEEPEQ 120
LQQNPSSSFFPPLPSPFSSPKLRPTPSSRFKLLANLGGGDAEIKKGGKKKFITKEEEPEQ
Sbjct: 61 LQQNPSSSFFPPLPSPFSSPKLRPTPSSRFKLLANLGGGDAEIKKGGKKKFITKEEEPEQ 120
BLAST of MELO3C025961 vs. ExPASy TrEMBL
Match:
A0A1S3CKW7 (uncharacterized protein LOC103502113 OS=Cucumis melo OX=3656 GN=LOC103502113 PE=4 SV=1)
HSP 1 Score: 232.3 bits (591), Expect = 1.1e-57
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0
Query: 1 MSKYHCHNIHIQISCVDLAKELQEYFISESLVRSSTNTAVTNSTMAAKFPLSSSLTVKFP 60
MSKYHCHNIHIQISCVDLAKELQEYFISESLVRSSTNTAVTNSTMAAKFPLSSSLTVKFP
Sbjct: 1 MSKYHCHNIHIQISCVDLAKELQEYFISESLVRSSTNTAVTNSTMAAKFPLSSSLTVKFP 60
Query: 61 LQQNPSSSFFPPLPSPFSSPKLRPTPSSRFKLLANLGGGDAEIKKGGKKKFITKEEEPEQ 120
LQQNPSSSFFPPLPSPFSSPKLRPTPSSRFKLLANLGGGDAEIKKGGKKKFITKEEEPEQ
Sbjct: 61 LQQNPSSSFFPPLPSPFSSPKLRPTPSSRFKLLANLGGGDAEIKKGGKKKFITKEEEPEQ 120
BLAST of MELO3C025961 vs. ExPASy TrEMBL
Match:
A0A0A0KA68 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G112440 PE=4 SV=1)
HSP 1 Score: 147.1 bits (370), Expect = 4.6e-32
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 0
Query: 45 MAAKFPLSSSLTVKFPLQQNPSSSFFPPLPSPFSSPKLRPTPSSRFKLLANLGGGDAEIK 104
MAAKFPLSSSLT+KFPLQQNPSSSFFPPLPSPFSSPKLRPTPSSRFKLLANLGGGDAEIK
Sbjct: 1 MAAKFPLSSSLTIKFPLQQNPSSSFFPPLPSPFSSPKLRPTPSSRFKLLANLGGGDAEIK 60
Query: 105 KGGKKKFITKEEEPEQ 121
KGGKKKFITKEEEPEQ
Sbjct: 61 KGGKKKFITKEEEPEQ 76
BLAST of MELO3C025961 vs. ExPASy TrEMBL
Match:
A0A6J1CI22 (uncharacterized protein LOC111011130 OS=Momordica charantia OX=3673 GN=LOC111011130 PE=4 SV=1)
HSP 1 Score: 106.7 bits (265), Expect = 6.9e-20
Identity = 63/78 (80.77%), Postives = 68/78 (87.18%), Query Frame = 0
Query: 45 MAAKFPLSSSLTVKFPLQQNPSSSFFPPLPSPFSSPKLRP-TPSSRFKLLANLGGGDAEI 104
MAAKF LSSSLT+KFPLQQNP SSFF PLPS SSP +P + +SRFKL+ANLGGGDAEI
Sbjct: 1 MAAKFALSSSLTIKFPLQQNP-SSFFAPLPSGLSSPNPKPKSRASRFKLVANLGGGDAEI 60
Query: 105 KK-GGKKKFITKEEEPEQ 121
KK GGKKKFITKEEEPEQ
Sbjct: 61 KKGGGKKKFITKEEEPEQ 77
BLAST of MELO3C025961 vs. ExPASy TrEMBL
Match:
A0A6J1I5Y3 (uncharacterized protein LOC111469898 OS=Cucurbita maxima OX=3661 GN=LOC111469898 PE=4 SV=1)
HSP 1 Score: 105.1 bits (261), Expect = 2.0e-19
Identity = 62/78 (79.49%), Postives = 68/78 (87.18%), Query Frame = 0
Query: 45 MAAKFPLSSSL-TVKFPLQQNPSSSFFPPLP-SPFSSPKLRPTPSSRFKLLANLGGGDAE 104
MAAKFPLSSSL T+KFPLQQNP S FFPPLP + FS PK +P +S+FKLLAN GGGDAE
Sbjct: 1 MAAKFPLSSSLTTIKFPLQQNP-SPFFPPLPCTTFSPPKPKPR-ASQFKLLANSGGGDAE 60
Query: 105 IKKGGKKKFITKEEEPEQ 121
+KKGGKKKFITKEEEPEQ
Sbjct: 61 VKKGGKKKFITKEEEPEQ 76
BLAST of MELO3C025961 vs. TAIR 10
Match:
AT4G13500.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G05310.1); Has 50 Blast hits to 50 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 52.0 bits (123), Expect = 3.9e-07
Identity = 42/87 (48.28%), Postives = 46/87 (52.87%), Query Frame = 0
Query: 45 MAAKFPLSSSLTVKFPLQQNPSSS-----------FFPPLPSPFSSPKLRPTPSSRFKLL 104
MAAKF +SSS + SSS FF P PSP P+ FKL
Sbjct: 1 MAAKFRISSSSFSHRASDSSTSSSSSYSSLLALPQFFCP-PSPLGFPE--------FKLH 60
Query: 105 ANLGGGDAEIKKGGKKKFITKEEEPEQ 121
A LGGGD E+K KKKFITKEEEPEQ
Sbjct: 61 AKLGGGDGEVKPKDKKKFITKEEEPEQ 78
BLAST of MELO3C025961 vs. TAIR 10
Match:
AT2G05310.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G13500.1); Has 50 Blast hits to 50 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 45.1 bits (105), Expect = 4.8e-05
Identity = 37/80 (46.25%), Postives = 42/80 (52.50%), Query Frame = 0
Query: 45 MAAKFPLSSS----LTVKFPLQQNPSSSFFPPLPSPFSSPKLRPTPSSRFKLLANLGGGD 104
MAAK + SS T + S S LP F P P +FKL A LGGGD
Sbjct: 1 MAAKLCIPSSSFSHRTNDSITSSSSSYSSLLALPQFFCPPS--PLGFPQFKLHAKLGGGD 60
Query: 105 AEIKKGGKKKFITKEEEPEQ 121
E+K KKKFITK+EEPEQ
Sbjct: 61 GEVKPKDKKKFITKDEEPEQ 78
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| XP_008464165.1 | 2.3e-57 | 100.00 | PREDICTED: uncharacterized protein LOC103502113 [Cucumis melo] >KAA0060798.1 unc... | [more] |
| XP_004140001.1 | 9.5e-32 | 98.68 | uncharacterized protein LOC101219556 [Cucumis sativus] >KGN46605.1 hypothetical ... | [more] |
| XP_038902667.1 | 6.9e-22 | 84.21 | uncharacterized protein LOC120089303 [Benincasa hispida] | [more] |
| XP_022140463.1 | 1.4e-19 | 80.77 | uncharacterized protein LOC111011130 [Momordica charantia] | [more] |
| XP_023534591.1 | 4.2e-19 | 78.48 | uncharacterized protein LOC111796124 [Cucurbita pepo subsp. pepo] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3CJG8 | 1.1e-57 | 100.00 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A1S3CKW7 | 1.1e-57 | 100.00 | uncharacterized protein LOC103502113 OS=Cucumis melo OX=3656 GN=LOC103502113 PE=... | [more] |
| A0A0A0KA68 | 4.6e-32 | 98.68 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G112440 PE=4 SV=1 | [more] |
| A0A6J1CI22 | 6.9e-20 | 80.77 | uncharacterized protein LOC111011130 OS=Momordica charantia OX=3673 GN=LOC111011... | [more] |
| A0A6J1I5Y3 | 2.0e-19 | 79.49 | uncharacterized protein LOC111469898 OS=Cucurbita maxima OX=3661 GN=LOC111469898... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT4G13500.1 | 3.9e-07 | 48.28 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |
| AT2G05310.1 | 4.8e-05 | 46.25 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |
