MELO3C022876.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C022876.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Protein MNN4-like
Location	chr10: 28286249 .. 28286475 (+)
RNA-Seq Expression	MELO3C022876.jh1
Synteny	MELO3C022876.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGAAGAAAAGGGAGAAGCAAAGAAAAAGGGACGAGAAGAGCTCCTGAGCGAGGTAGAGATGGTGGCCCAGTATATAGAAAAGGACAAGGGCAAGGAAAAGGCACATGAAGGGCACTGTGAGGGGTTTAAGAAAGAAGTAGAAAACCTGATTCCCTTGGAGGATGAAGCGCCAAGACCAAAGAAAAAGAGAAAGGTCACAATGAAAAAGAAGACGTTGAAGGCACAA

mRNA sequence

TGGAAGAAAAGGGAGAAGCAAAGAAAAAGGGACGAGAAGAGCTCCTGAGCGAGGTAGAGATGGTGGCCCAGTATATAGAAAAGGACAAGGGCAAGGAAAAGGCACATGAAGGGCACTGTGAGGGGTTTAAGAAAGAAGTAGAAAACCTGATTCCCTTGGAGGATGAAGCGCCAAGACCAAAGAAAAAGAGAAAGGTCACAATGAAAAAGAAGACGTTGAAGGCACAA

Coding sequence (CDS)

ATGGTGGCCCAGTATATAGAAAAGGACAAGGGCAAGGAAAAGGCACATGAAGGGCACTGTGAGGGGTTTAAGAAAGAAGTAGAAAACCTGATTCCCTTGGAGGATGAAGCGCCAAGACCAAAGAAAAAGAGAAAGGTCACAATGAAAAAGAAGACGTTGAAGGCACAA

Protein sequence

MVAQYIEKDKGKEKAHEGHCEGFKKEVENLIPLEDEAPRPKKKRKVTMKKKTLKAQ

Homology

[Close]

BLAST of MELO3C022876.jh1 vs. NCBI nr
Match: KAA0048705.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 80.1 bits (196), Expect = 1.11e-16
Identity = 42/55 (76.36%), Postives = 45/55 (81.82%), Query Frame = 0


Query: 2   VAQYIEKDKGKEKAHEGHCEGFKKEVENLIPLEDEAPRPKKKRKVTMKKKTLKAQ 56
           V    +KDKGKEK HE HCE F+KE+ENL PLE EAPRPKKKRKVTMKKKTLK Q
Sbjct: 118 VVHSAKKDKGKEKTHEEHCEEFEKEIENLCPLEKEAPRPKKKRKVTMKKKTLKMQ 172

[Close]

BLAST of MELO3C022876.jh1 vs. NCBI nr
Match: TYK15833.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 77.0 bits (188), Expect = 8.44e-16
Identity = 41/55 (74.55%), Postives = 44/55 (80.00%), Query Frame = 0


Query: 2   VAQYIEKDKGKEKAHEGHCEGFKKEVENLIPLEDEAPRPKKKRKVTMKKKTLKAQ 56
           V    +KDKGKEK  E HCE F+KE+ENL PLE EAPRPKKKRKVTMKKKTLK Q
Sbjct: 54  VVHSAKKDKGKEKTQEEHCEEFEKEIENLCPLEKEAPRPKKKRKVTMKKKTLKMQ 108

[Close]

BLAST of MELO3C022876.jh1 vs. NCBI nr
Match: KAA0046474.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 60.8 bits (146), Expect = 1.75e-10
Identity = 35/55 (63.64%), Postives = 39/55 (70.91%), Query Frame = 0


Query: 2  VAQYIEKDKGKEKAHEGHCEGFKKEVENLIPLEDEAPRPKKKRKVTMKKKTLKAQ 56
          VA  +EK K KE   + HCE FKKE+E L PL DE  RP KKRKV MKKKTL+AQ
Sbjct: 19 VALSVEKGKDKENNFDEHCEEFKKEIEELSPLLDEMVRPAKKRKVAMKKKTLRAQ 73

[Close]

BLAST of MELO3C022876.jh1 vs. NCBI nr
Match: TYK15837.1 (hypothetical protein E5676_scaffold637G00080 [Cucumis melo var. makuwa])

HSP 1 Score: 62.0 bits (149), Expect = 3.40e-10
Identity = 34/52 (65.38%), Postives = 40/52 (76.92%), Query Frame = 0


Query: 2   VAQYIEKDKGKEKAHEGHCEGFKKEVENLIPLEDEAPRPKKKRKVTMKKKTL 53
            AQ  EK KGK+   + HC+ F+KE +NL  LE+EAPRPKKKRKVTMKKKTL
Sbjct: 79  AAQSAEKVKGKDMTFKEHCKEFEKEFKNLSHLEEEAPRPKKKRKVTMKKKTL 130

[Close]

BLAST of MELO3C022876.jh1 vs. NCBI nr
Match: KAA0066500.1 (protein MNN4-like [Cucumis melo var. makuwa] >TYK06141.1 protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 55.5 bits (132), Expect = 1.93e-07
Identity = 31/52 (59.62%), Postives = 37/52 (71.15%), Query Frame = 0


Query: 2   VAQYIEKDKGKEKAHEGHCEGFKKEVENLIPLEDEAPRPKKKRKVTMKKKTL 53
           VA + EK KG+EK  E H E F+KE+  LIPLED+A RP  KRK+ MKKK L
Sbjct: 89  VAIFAEKGKGEEKTFEEHYEEFEKEINELIPLEDKAIRPATKRKIMMKKKAL 140

[Close]

BLAST of MELO3C022876.jh1 vs. ExPASy TrEMBL
Match: A0A5A7U502 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G00280 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 5.37e-17
Identity = 42/55 (76.36%), Postives = 45/55 (81.82%), Query Frame = 0


Query: 2   VAQYIEKDKGKEKAHEGHCEGFKKEVENLIPLEDEAPRPKKKRKVTMKKKTLKAQ 56
           V    +KDKGKEK HE HCE F+KE+ENL PLE EAPRPKKKRKVTMKKKTLK Q
Sbjct: 118 VVHSAKKDKGKEKTHEEHCEEFEKEIENLCPLEKEAPRPKKKRKVTMKKKTLKMQ 172

[Close]

BLAST of MELO3C022876.jh1 vs. ExPASy TrEMBL
Match: A0A5D3CVF0 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold637G00030 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 4.09e-16
Identity = 41/55 (74.55%), Postives = 44/55 (80.00%), Query Frame = 0


Query: 2   VAQYIEKDKGKEKAHEGHCEGFKKEVENLIPLEDEAPRPKKKRKVTMKKKTLKAQ 56
           V    +KDKGKEK  E HCE F+KE+ENL PLE EAPRPKKKRKVTMKKKTLK Q
Sbjct: 54  VVHSAKKDKGKEKTQEEHCEEFEKEIENLCPLEKEAPRPKKKRKVTMKKKTLKMQ 108

[Close]

BLAST of MELO3C022876.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TTT3 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold543G00540 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 8.48e-11
Identity = 35/55 (63.64%), Postives = 39/55 (70.91%), Query Frame = 0


Query: 2  VAQYIEKDKGKEKAHEGHCEGFKKEVENLIPLEDEAPRPKKKRKVTMKKKTLKAQ 56
          VA  +EK K KE   + HCE FKKE+E L PL DE  RP KKRKV MKKKTL+AQ
Sbjct: 19 VALSVEKGKDKENNFDEHCEEFKKEIEELSPLLDEMVRPAKKRKVAMKKKTLRAQ 73

[Close]

BLAST of MELO3C022876.jh1 vs. ExPASy TrEMBL
Match: A0A5D3CV96 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold637G00080 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.65e-10
Identity = 34/52 (65.38%), Postives = 40/52 (76.92%), Query Frame = 0


Query: 2   VAQYIEKDKGKEKAHEGHCEGFKKEVENLIPLEDEAPRPKKKRKVTMKKKTL 53
            AQ  EK KGK+   + HC+ F+KE +NL  LE+EAPRPKKKRKVTMKKKTL
Sbjct: 79  AAQSAEKVKGKDMTFKEHCKEFEKEFKNLSHLEEEAPRPKKKRKVTMKKKTL 130

[Close]

BLAST of MELO3C022876.jh1 vs. ExPASy TrEMBL
Match: A0A5D3C2J1 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold572G00380 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 9.36e-08
Identity = 31/52 (59.62%), Postives = 37/52 (71.15%), Query Frame = 0


Query: 2   VAQYIEKDKGKEKAHEGHCEGFKKEVENLIPLEDEAPRPKKKRKVTMKKKTL 53
           VA + EK KG+EK  E H E F+KE+  LIPLED+A RP  KRK+ MKKK L
Sbjct: 89  VAIFAEKGKGEEKTFEEHYEEFEKEINELIPLEDKAIRPATKRKIMMKKKAL 140

The following BLAST results are available for this feature:

BLAST of MELO3C022876.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0048705.1	1.11e-16	76.36	protein MNN4-like [Cucumis melo var. makuwa]	[more]
TYK15833.1	8.44e-16	74.55	protein MNN4-like [Cucumis melo var. makuwa]	[more]
KAA0046474.1	1.75e-10	63.64	protein MNN4-like [Cucumis melo var. makuwa]	[more]
TYK15837.1	3.40e-10	65.38	hypothetical protein E5676_scaffold637G00080 [Cucumis melo var. makuwa]	[more]
KAA0066500.1	1.93e-07	59.62	protein MNN4-like [Cucumis melo var. makuwa] >TYK06141.1 protein MNN4-like [Cucu...	[more]

BLAST of MELO3C022876.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C022876.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U502	5.37e-17	76.36	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G0...	[more]
A0A5D3CVF0	4.09e-16	74.55	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold637G00...	[more]
A0A5A7TTT3	8.48e-11	63.64	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold543G00...	[more]
A0A5D3CV96	1.65e-10	65.38	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3C2J1	9.36e-08	59.62	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold572G00...	[more]

BLAST of MELO3C022876.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..56

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C022876.jh1.t1	MELO3C022876.jh1.t1	mRNA