Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAAGAAGGTGGAAGAAAGGTTCGAGGCAGTAGAACAAGATATTTCTAGCATCCGAGCAGAACTTCCAAAGTTACCTGCAATAGAAGAGAACCTATCCTCAGTGGCAAAGAACATTGAGCGACTGAGCATCCAAAACGAAAAATAG
mRNA sequence
ATGGCGAAGAAGGTGGAAGAAAGGTTCGAGGCAGTAGAACAAGATATTTCTAGCATCCGAGCAGAACTTCCAAAGTTACCTGCAATAGAAGAGAACCTATCCTCAGTGGCAAAGAACATTGAGCGACTGAGCATCCAAAACGAAAAATAG
Coding sequence (CDS)
ATGGCGAAGAAGGTGGAAGAAAGGTTCGAGGCAGTAGAACAAGATATTTCTAGCATCCGAGCAGAACTTCCAAAGTTACCTGCAATAGAAGAGAACCTATCCTCAGTGGCAAAGAACATTGAGCGACTGAGCATCCAAAACGAAAAATAG
Protein sequence
MAKKVEERFEAVEQDISSIRAELPKLPAIEENLSSVAKNIERLSIQNEK
Homology
BLAST of MELO3C021826 vs. NCBI nr
Match:
KAA0039162.1 (hypothetical protein E6C27_scaffold121G00640 [Cucumis melo var. makuwa] >TYK26950.1 hypothetical protein E5676_scaffold322G00090 [Cucumis melo var. makuwa])
HSP 1 Score: 66.2 bits (160), Expect = 8.7e-08
Identity = 37/51 (72.55%), Postives = 44/51 (86.27%), Query Frame = 0
Query: 1 MAKKVEERFEAVEQDISSIRAELPKLPAIEENLSSVA--KNIERLSIQNEK 50
M KK EERFEA++Q+IS IRAEL KLPA+EE LSS+A KNIE+LSIQ+EK
Sbjct: 9 MTKKKEERFEAIDQEISGIRAELQKLPAVEEKLSSLAMVKNIEQLSIQSEK 59
BLAST of MELO3C021826 vs. NCBI nr
Match:
KAA0043341.1 (putative ribose-5-phosphate isomerase 4 [Cucumis melo var. makuwa] >TYK02671.1 putative ribose-5-phosphate isomerase 4 [Cucumis melo var. makuwa])
HSP 1 Score: 64.3 bits (155), Expect = 3.3e-07
Identity = 30/49 (61.22%), Postives = 42/49 (85.71%), Query Frame = 0
Query: 1 MAKKVEERFEAVEQDISSIRAELPKLPAIEENLSSVAKNIERLSIQNEK 50
MAKK EERFE++EQ++S ++ +L KLP +EE LS++ KNIERL++QNEK
Sbjct: 142 MAKKYEERFESLEQEVSEMKVDLQKLPVMEEKLSTIMKNIERLNVQNEK 190
BLAST of MELO3C021826 vs. NCBI nr
Match:
KAA0036991.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK21214.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 64.3 bits (155), Expect = 3.3e-07
Identity = 31/49 (63.27%), Postives = 42/49 (85.71%), Query Frame = 0
Query: 1 MAKKVEERFEAVEQDISSIRAELPKLPAIEENLSSVAKNIERLSIQNEK 50
MAKK EERFEA+EQ++S ++ +L KLPA+EE LS++ K IERL++QNEK
Sbjct: 1 MAKKHEERFEALEQEVSEMKKDLQKLPAVEEKLSTIMKTIERLNVQNEK 49
BLAST of MELO3C021826 vs. NCBI nr
Match:
TYK17139.1 (putative retroelement pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 63.5 bits (153), Expect = 5.7e-07
Identity = 31/49 (63.27%), Postives = 42/49 (85.71%), Query Frame = 0
Query: 1 MAKKVEERFEAVEQDISSIRAELPKLPAIEENLSSVAKNIERLSIQNEK 50
MAKK EERFEA+EQ++S ++ +L KLPA+EE LS++ K IERL++QNEK
Sbjct: 1 MAKKHEERFEALEQEVSEMKKDLQKLPAVEEKLSTIMKMIERLNVQNEK 49
BLAST of MELO3C021826 vs. NCBI nr
Match:
KAA0054161.1 (uncharacterized protein E6C27_scaffold131G00900 [Cucumis melo var. makuwa])
HSP 1 Score: 62.4 bits (150), Expect = 1.3e-06
Identity = 33/47 (70.21%), Postives = 38/47 (80.85%), Query Frame = 0
Query: 3 KKVEERFEAVEQDISSIRAELPKLPAIEENLSSVAKNIERLSIQNEK 50
K++EE+ EA +QDIS IR EL KLP IEENLSS AK+IERL IQ EK
Sbjct: 4 KRIEEKLEAFDQDISEIRVELHKLPTIEENLSSTAKSIERLGIQAEK 50
BLAST of MELO3C021826 vs. ExPASy TrEMBL
Match:
A0A5A7T6Q0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold322G00090 PE=4 SV=1)
HSP 1 Score: 66.2 bits (160), Expect = 4.2e-08
Identity = 37/51 (72.55%), Postives = 44/51 (86.27%), Query Frame = 0
Query: 1 MAKKVEERFEAVEQDISSIRAELPKLPAIEENLSSVA--KNIERLSIQNEK 50
M KK EERFEA++Q+IS IRAEL KLPA+EE LSS+A KNIE+LSIQ+EK
Sbjct: 9 MTKKKEERFEAIDQEISGIRAELQKLPAVEEKLSSLAMVKNIEQLSIQSEK 59
BLAST of MELO3C021826 vs. ExPASy TrEMBL
Match:
A0A5A7T5W7 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold359G00210 PE=4 SV=1)
HSP 1 Score: 64.3 bits (155), Expect = 1.6e-07
Identity = 31/49 (63.27%), Postives = 42/49 (85.71%), Query Frame = 0
Query: 1 MAKKVEERFEAVEQDISSIRAELPKLPAIEENLSSVAKNIERLSIQNEK 50
MAKK EERFEA+EQ++S ++ +L KLPA+EE LS++ K IERL++QNEK
Sbjct: 1 MAKKHEERFEALEQEVSEMKKDLQKLPAVEEKLSTIMKTIERLNVQNEK 49
BLAST of MELO3C021826 vs. ExPASy TrEMBL
Match:
A0A5D3BSE7 (Putative ribose-5-phosphate isomerase 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1734G00180 PE=4 SV=1)
HSP 1 Score: 64.3 bits (155), Expect = 1.6e-07
Identity = 30/49 (61.22%), Postives = 42/49 (85.71%), Query Frame = 0
Query: 1 MAKKVEERFEAVEQDISSIRAELPKLPAIEENLSSVAKNIERLSIQNEK 50
MAKK EERFE++EQ++S ++ +L KLP +EE LS++ KNIERL++QNEK
Sbjct: 142 MAKKYEERFESLEQEVSEMKVDLQKLPVMEEKLSTIMKNIERLNVQNEK 190
BLAST of MELO3C021826 vs. ExPASy TrEMBL
Match:
A0A5D3D379 (Putative retroelement pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1032G00780 PE=4 SV=1)
HSP 1 Score: 63.5 bits (153), Expect = 2.7e-07
Identity = 31/49 (63.27%), Postives = 42/49 (85.71%), Query Frame = 0
Query: 1 MAKKVEERFEAVEQDISSIRAELPKLPAIEENLSSVAKNIERLSIQNEK 50
MAKK EERFEA+EQ++S ++ +L KLPA+EE LS++ K IERL++QNEK
Sbjct: 1 MAKKHEERFEALEQEVSEMKKDLQKLPAVEEKLSTIMKMIERLNVQNEK 49
BLAST of MELO3C021826 vs. ExPASy TrEMBL
Match:
A0A5A7UKU8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold131G00900 PE=4 SV=1)
HSP 1 Score: 62.4 bits (150), Expect = 6.1e-07
Identity = 33/47 (70.21%), Postives = 38/47 (80.85%), Query Frame = 0
Query: 3 KKVEERFEAVEQDISSIRAELPKLPAIEENLSSVAKNIERLSIQNEK 50
K++EE+ EA +QDIS IR EL KLP IEENLSS AK+IERL IQ EK
Sbjct: 4 KRIEEKLEAFDQDISEIRVELHKLPTIEENLSSTAKSIERLGIQAEK 50
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0039162.1 | 8.7e-08 | 72.55 | hypothetical protein E6C27_scaffold121G00640 [Cucumis melo var. makuwa] >TYK2695... | [more] |
KAA0043341.1 | 3.3e-07 | 61.22 | putative ribose-5-phosphate isomerase 4 [Cucumis melo var. makuwa] >TYK02671.1 p... | [more] |
KAA0036991.1 | 3.3e-07 | 63.27 | ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK21214.1 ty3-gyp... | [more] |
TYK17139.1 | 5.7e-07 | 63.27 | putative retroelement pol polyprotein [Cucumis melo var. makuwa] | [more] |
KAA0054161.1 | 1.3e-06 | 70.21 | uncharacterized protein E6C27_scaffold131G00900 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7T6Q0 | 4.2e-08 | 72.55 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7T5W7 | 1.6e-07 | 63.27 | Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
A0A5D3BSE7 | 1.6e-07 | 61.22 | Putative ribose-5-phosphate isomerase 4 OS=Cucumis melo var. makuwa OX=1194695 G... | [more] |
A0A5D3D379 | 2.7e-07 | 63.27 | Putative retroelement pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=... | [more] |
A0A5A7UKU8 | 6.1e-07 | 70.21 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
Match Name | E-value | Identity | Description | |