Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAGCGAGACTATACCAACATATCAACTGAACACATGGAAGAGGATGATTCTATCGACTTTAACCACATTAAACATGAAGATGATGATTCTATCGACTTTAACCACATTAAACATGAAGATGATGATTCTATCGACTCCAACCACATTGAAGATGAAGATGGTGATCCTATCGACTGCAACTGCATTGAAGATGAAGATGATGATCCTATCGACTGCGACCACATTGAAGATGAAGATGATGATCGTCTTGGTTACGCCGCATTGAAGATAGAGATGATGATCATTTTGGTTGCGTTGCATTGA
mRNA sequence
ATGGAGAAGCGAGACTATACCAACATATCAACTGAACACATGGAAGAGGATGATTCTATCGACTTTAACCACATTAAACATGAAGATGATGATTCTATCGACTTTAACCACATTAAACATGAAGATGATGATTCTATCGACTCCAACCACATTGAAGATGAAGATGGTGATCCTATCGACTGCAACTGCATTGAAGATGAAGATGATGATCCTATCGACTGCGACCACATTGAAGATGAAGATGATGATCGTCTTGGTTACGCCGCATTGAAGATAGAGATGATGATCATTTTGGTTGCGTTGCATTGA
Coding sequence (CDS)
ATGGAGAAGCGAGACTATACCAACATATCAACTGAACACATGGAAGAGGATGATTCTATCGACTTTAACCACATTAAACATGAAGATGATGATTCTATCGACTTTAACCACATTAAACATGAAGATGATGATTCTATCGACTCCAACCACATTGAAGATGAAGATGGTGATCCTATCGACTGCAACTGCATTGAAGATGAAGATGATGATCCTATCGACTGCGACCACATTGAAGATGAAGATGATGATCGTCTTGGTTACGCCGCATTGAAGATAGAGATGATGATCATTTTGGTTGCGTTGCATTGA
Protein sequence
MEKRDYTNISTEHMEEDDSIDFNHIKHEDDDSIDFNHIKHEDDDSIDSNHIEDEDGDPIDCNCIEDEDDDPIDCDHIEDEDDDRLGYAALKIEMMIILVALH
Homology
BLAST of MELO3C020364 vs. NCBI nr
Match:
KAA0039603.1 (phosphopantothenoylcysteine decarboxylase subunit VHS3-like [Cucumis melo var. makuwa] >TYK01703.1 phosphopantothenoylcysteine decarboxylase subunit VHS3-like [Cucumis melo var. makuwa])
HSP 1 Score: 198.0 bits (502), Expect = 4.0e-47
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0
Query: 1 MEKRDYTNISTEHMEEDDSIDFNHIKHEDDDSIDFNHIKHEDDDSIDSNHIEDEDGDPID 60
MEKRDYTNISTEHMEEDDSIDFNHIKHEDDDSIDFNHIKHEDDDSIDSNHIEDEDGDPID
Sbjct: 1 MEKRDYTNISTEHMEEDDSIDFNHIKHEDDDSIDFNHIKHEDDDSIDSNHIEDEDGDPID 60
Query: 61 CNCIEDEDDDPIDCDHIEDEDDDRLGYAALKIEMMIILVALH 103
CNCIEDEDDDPIDCDHIEDEDDDRLGYAALKIEMMIILVALH
Sbjct: 61 CNCIEDEDDDPIDCDHIEDEDDDRLGYAALKIEMMIILVALH 102
BLAST of MELO3C020364 vs. NCBI nr
Match:
XP_016902073.1 (PREDICTED: phosphopantothenoylcysteine decarboxylase subunit VHS3-like [Cucumis melo])
HSP 1 Score: 190.3 bits (482), Expect = 8.4e-45
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0
Query: 1 MEKRDYTNISTEHMEEDDSIDFNHIKHEDDDSIDFNHIKHEDDDSIDSNHIEDEDGDPID 60
MEKRDYTNISTEHMEEDDSIDFNHIKHEDDDSIDFNHIKHEDDDSIDSNHIEDEDGDPID
Sbjct: 1 MEKRDYTNISTEHMEEDDSIDFNHIKHEDDDSIDFNHIKHEDDDSIDSNHIEDEDGDPID 60
Query: 61 CNCIEDEDDDPIDCDHIEDEDDDRLGYAALKIEMMIIL 99
CNCIEDEDDDPIDCDHIEDEDDDRLGYAALKIEMMIIL
Sbjct: 61 CNCIEDEDDDPIDCDHIEDEDDDRLGYAALKIEMMIIL 98
BLAST of MELO3C020364 vs. NCBI nr
Match:
XP_008456992.1 (PREDICTED: phosphopantothenoylcysteine decarboxylase subunit VHS3-like [Cucumis melo] >TYK25823.1 phosphopantothenoylcysteine decarboxylase subunit VHS3-like [Cucumis melo var. makuwa])
HSP 1 Score: 87.0 bits (214), Expect = 1.0e-13
Identity = 58/95 (61.05%), Postives = 67/95 (70.53%), Query Frame = 0
Query: 16 EDDSIDFNHIKHEDDDSIDFNHIKHEDDDSID-----------SNHIEDEDGDPIDCNCI 75
+DD IDFN IK EDDDSIDF +I+ EDDDSID +IEDED D IDC+ I
Sbjct: 8 DDDPIDFNRIKDEDDDSIDF-YIEDEDDDSIDFYIENEDDDFIDFYIEDEDDDSIDCDHI 67
Query: 76 EDEDDDPIDCDHIEDEDDDRLGYAALKIEMMIILV 100
ED+DDDPI D EDEDDDRLG ALK++MMI+ V
Sbjct: 68 EDKDDDPIGWDRFEDEDDDRLGCVALKMKMMIVSV 101
BLAST of MELO3C020364 vs. NCBI nr
Match:
KAA0037362.1 (phosphopantothenoylcysteine decarboxylase subunit VHS3-like [Cucumis melo var. makuwa] >TYJ97544.1 phosphopantothenoylcysteine decarboxylase subunit VHS3-like [Cucumis melo var. makuwa])
HSP 1 Score: 73.9 bits (180), Expect = 8.7e-10
Identity = 51/106 (48.11%), Postives = 66/106 (62.26%), Query Frame = 0
Query: 12 EHMEEDDS-----IDFNHIKHEDDDSIDFNHIKHEDDDSIDSNHIEDED----------- 71
+H++EDD+ IDFN +K E DDSID + I+ EDDD I + ED+D
Sbjct: 28 QHLKEDDAIDDDPIDFNLVKDEADDSIDCDCIEDEDDDPISCHRFEDDDRLGCVTLKMEM 87
Query: 72 ----GDPIDCNCIEDEDDDPIDCDHIEDEDDDRLGYAALKIEMMII 98
DPI NC++DEDDDPI CD EDE+D+ LG A LKI+MMI+
Sbjct: 88 LLEEDDPIHFNCVKDEDDDPIGCDRFEDENDNCLGCATLKIKMMIV 133
BLAST of MELO3C020364 vs. NCBI nr
Match:
KAA0050091.1 (prostatic spermine-binding protein-like [Cucumis melo var. makuwa])
HSP 1 Score: 73.2 bits (178), Expect = 1.5e-09
Identity = 41/62 (66.13%), Postives = 48/62 (77.42%), Query Frame = 0
Query: 41 EDDDSIDSNHIEDEDGDPIDCNCIEDEDDDPIDCDHIEDEDDDRLGYAALKIEMMIILVA 100
E +D I+ N I+DED D +DC+ IEDEDDDPIDCD EDEDDD LG A LK+EMMI+ A
Sbjct: 2 EKNDPINFNLIKDEDDDSVDCDRIEDEDDDPIDCDRFEDEDDDCLGRATLKMEMMIVSTA 61
Query: 101 LH 103
LH
Sbjct: 62 LH 63
BLAST of MELO3C020364 vs. ExPASy TrEMBL
Match:
A0A5D3BPS5 (Phosphopantothenoylcysteine decarboxylase subunit VHS3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold775G00260 PE=4 SV=1)
HSP 1 Score: 198.0 bits (502), Expect = 1.9e-47
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0
Query: 1 MEKRDYTNISTEHMEEDDSIDFNHIKHEDDDSIDFNHIKHEDDDSIDSNHIEDEDGDPID 60
MEKRDYTNISTEHMEEDDSIDFNHIKHEDDDSIDFNHIKHEDDDSIDSNHIEDEDGDPID
Sbjct: 1 MEKRDYTNISTEHMEEDDSIDFNHIKHEDDDSIDFNHIKHEDDDSIDSNHIEDEDGDPID 60
Query: 61 CNCIEDEDDDPIDCDHIEDEDDDRLGYAALKIEMMIILVALH 103
CNCIEDEDDDPIDCDHIEDEDDDRLGYAALKIEMMIILVALH
Sbjct: 61 CNCIEDEDDDPIDCDHIEDEDDDRLGYAALKIEMMIILVALH 102
BLAST of MELO3C020364 vs. ExPASy TrEMBL
Match:
A0A1S4E1H3 (phosphopantothenoylcysteine decarboxylase subunit VHS3-like OS=Cucumis melo OX=3656 GN=LOC107991530 PE=4 SV=1)
HSP 1 Score: 190.3 bits (482), Expect = 4.0e-45
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0
Query: 1 MEKRDYTNISTEHMEEDDSIDFNHIKHEDDDSIDFNHIKHEDDDSIDSNHIEDEDGDPID 60
MEKRDYTNISTEHMEEDDSIDFNHIKHEDDDSIDFNHIKHEDDDSIDSNHIEDEDGDPID
Sbjct: 1 MEKRDYTNISTEHMEEDDSIDFNHIKHEDDDSIDFNHIKHEDDDSIDSNHIEDEDGDPID 60
Query: 61 CNCIEDEDDDPIDCDHIEDEDDDRLGYAALKIEMMIIL 99
CNCIEDEDDDPIDCDHIEDEDDDRLGYAALKIEMMIIL
Sbjct: 61 CNCIEDEDDDPIDCDHIEDEDDDRLGYAALKIEMMIIL 98
BLAST of MELO3C020364 vs. ExPASy TrEMBL
Match:
A0A5D3DQ88 (Phosphopantothenoylcysteine decarboxylase subunit VHS3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G00280 PE=4 SV=1)
HSP 1 Score: 87.0 bits (214), Expect = 4.8e-14
Identity = 58/95 (61.05%), Postives = 67/95 (70.53%), Query Frame = 0
Query: 16 EDDSIDFNHIKHEDDDSIDFNHIKHEDDDSID-----------SNHIEDEDGDPIDCNCI 75
+DD IDFN IK EDDDSIDF +I+ EDDDSID +IEDED D IDC+ I
Sbjct: 8 DDDPIDFNRIKDEDDDSIDF-YIEDEDDDSIDFYIENEDDDFIDFYIEDEDDDSIDCDHI 67
Query: 76 EDEDDDPIDCDHIEDEDDDRLGYAALKIEMMIILV 100
ED+DDDPI D EDEDDDRLG ALK++MMI+ V
Sbjct: 68 EDKDDDPIGWDRFEDEDDDRLGCVALKMKMMIVSV 101
BLAST of MELO3C020364 vs. ExPASy TrEMBL
Match:
A0A1S3C4K1 (phosphopantothenoylcysteine decarboxylase subunit VHS3-like OS=Cucumis melo OX=3656 GN=LOC103496781 PE=4 SV=1)
HSP 1 Score: 87.0 bits (214), Expect = 4.8e-14
Identity = 58/95 (61.05%), Postives = 67/95 (70.53%), Query Frame = 0
Query: 16 EDDSIDFNHIKHEDDDSIDFNHIKHEDDDSID-----------SNHIEDEDGDPIDCNCI 75
+DD IDFN IK EDDDSIDF +I+ EDDDSID +IEDED D IDC+ I
Sbjct: 8 DDDPIDFNRIKDEDDDSIDF-YIEDEDDDSIDFYIENEDDDFIDFYIEDEDDDSIDCDHI 67
Query: 76 EDEDDDPIDCDHIEDEDDDRLGYAALKIEMMIILV 100
ED+DDDPI D EDEDDDRLG ALK++MMI+ V
Sbjct: 68 EDKDDDPIGWDRFEDEDDDRLGCVALKMKMMIVSV 101
BLAST of MELO3C020364 vs. ExPASy TrEMBL
Match:
A0A5A7T1P1 (Phosphopantothenoylcysteine decarboxylase subunit VHS3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold85G00660 PE=4 SV=1)
HSP 1 Score: 73.9 bits (180), Expect = 4.2e-10
Identity = 51/106 (48.11%), Postives = 66/106 (62.26%), Query Frame = 0
Query: 12 EHMEEDDS-----IDFNHIKHEDDDSIDFNHIKHEDDDSIDSNHIEDED----------- 71
+H++EDD+ IDFN +K E DDSID + I+ EDDD I + ED+D
Sbjct: 28 QHLKEDDAIDDDPIDFNLVKDEADDSIDCDCIEDEDDDPISCHRFEDDDRLGCVTLKMEM 87
Query: 72 ----GDPIDCNCIEDEDDDPIDCDHIEDEDDDRLGYAALKIEMMII 98
DPI NC++DEDDDPI CD EDE+D+ LG A LKI+MMI+
Sbjct: 88 LLEEDDPIHFNCVKDEDDDPIGCDRFEDENDNCLGCATLKIKMMIV 133
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0039603.1 | 4.0e-47 | 100.00 | phosphopantothenoylcysteine decarboxylase subunit VHS3-like [Cucumis melo var. m... | [more] |
XP_016902073.1 | 8.4e-45 | 100.00 | PREDICTED: phosphopantothenoylcysteine decarboxylase subunit VHS3-like [Cucumis ... | [more] |
XP_008456992.1 | 1.0e-13 | 61.05 | PREDICTED: phosphopantothenoylcysteine decarboxylase subunit VHS3-like [Cucumis ... | [more] |
KAA0037362.1 | 8.7e-10 | 48.11 | phosphopantothenoylcysteine decarboxylase subunit VHS3-like [Cucumis melo var. m... | [more] |
KAA0050091.1 | 1.5e-09 | 66.13 | prostatic spermine-binding protein-like [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3BPS5 | 1.9e-47 | 100.00 | Phosphopantothenoylcysteine decarboxylase subunit VHS3-like OS=Cucumis melo var.... | [more] |
A0A1S4E1H3 | 4.0e-45 | 100.00 | phosphopantothenoylcysteine decarboxylase subunit VHS3-like OS=Cucumis melo OX=3... | [more] |
A0A5D3DQ88 | 4.8e-14 | 61.05 | Phosphopantothenoylcysteine decarboxylase subunit VHS3-like OS=Cucumis melo var.... | [more] |
A0A1S3C4K1 | 4.8e-14 | 61.05 | phosphopantothenoylcysteine decarboxylase subunit VHS3-like OS=Cucumis melo OX=3... | [more] |
A0A5A7T1P1 | 4.2e-10 | 48.11 | Phosphopantothenoylcysteine decarboxylase subunit VHS3-like OS=Cucumis melo var.... | [more] |
Match Name | E-value | Identity | Description | |