Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAACAGCAACTAACTATGGCTCTTGGCCCAGACAAGGCCCTAGGCTACGGGGAGATCAGAGCAAGAGGGAAGGCCTAGACGAATTCTTCGTCAATTTCATCGACCCTCGTGTAAACGAGTTCTTTCTGTGTTCAAGGTCGAGCGAGGAGCGGAACCTAGCCCTTTCCTTTCTTTGCTTTTGTTCCGAAACTCAGTCGGGGAATAGCTGATCCTATGCAAACAAGAACGAGATCTTTCCGCCAGCAAGTCTCGGAGGATTTACCGGTCACGGGCAACCGTAGAACCAACGAGCATCCCGCAGGCGAGGAAGCAAACAAGCGAATAGAAAAGTTCAGTCAGGAAAGTAATGCCGAGATCCGGGCCGGGGAGTTTTTCCGCGATGAGATAGAATCGAGGTCGGACCGGAGAGGGAACCTCGAAGGGCACAAGAGAAAAGCCAATAATCATCACCCCAACCAAAACCAAATGAGAAAGGCCCTCAGTCAAATGGAAGAAGGAAATGGAATGGTCTCTTTGACTAACTCGAATCGACGAAAGCCTGACCGACCGGTCCGAAGACCTGTCCCCTCTAGTCTAGAAAGGGATGAGGCTGACTCTCTGCTCCGTGCTAGTTTCATTCTGGAATAA
mRNA sequence
ATGGAAACAGCAACTAACTATGGCTCTTGGCCCAGACAAGGCCCTAGGCTACGGGGAGATCAGAGCAAGAGGGAAGGCCTAGACGAATTCTTCGTCAATTTCATCGACCCTCGTGTAAACGAGTTCTTTCTGTGTTCAAGTCGGGGAATAGCTGATCCTATGCAAACAAGAACGAGATCTTTCCGCCAGCAAGTCTCGGAGGATTTACCGGTCACGGGCAACCGTAGAACCAACGAGCATCCCGCAGGCGAGGAAGCAAACAAGCGAATAGAAAAGTTCAGTCAGGAAAGTAATGCCGAGATCCGGGCCGGGGAGTTTTTCCGCGATGAGATAGAATCGAGGTCGGACCGGAGAGGGAACCTCGAAGGGCACAAGAGAAAAGCCAATAATCATCACCCCAACCAAAACCAAATGAGAAAGGCCCTCAGTCAAATGGAAGAAGGAAATGGAATGGTCTCTTTGACTAACTCGAATCGACGAAAGCCTGACCGACCGGTCCGAAGACCTGTCCCCTCTAGTCTAGAAAGGGATGAGGCTGACTCTCTGCTCCGTGCTAGTTTCATTCTGGAATAA
Coding sequence (CDS)
ATGGAAACAGCAACTAACTATGGCTCTTGGCCCAGACAAGGCCCTAGGCTACGGGGAGATCAGAGCAAGAGGGAAGGCCTAGACGAATTCTTCGTCAATTTCATCGACCCTCGTGTAAACGAGTTCTTTCTGTGTTCAAGTCGGGGAATAGCTGATCCTATGCAAACAAGAACGAGATCTTTCCGCCAGCAAGTCTCGGAGGATTTACCGGTCACGGGCAACCGTAGAACCAACGAGCATCCCGCAGGCGAGGAAGCAAACAAGCGAATAGAAAAGTTCAGTCAGGAAAGTAATGCCGAGATCCGGGCCGGGGAGTTTTTCCGCGATGAGATAGAATCGAGGTCGGACCGGAGAGGGAACCTCGAAGGGCACAAGAGAAAAGCCAATAATCATCACCCCAACCAAAACCAAATGAGAAAGGCCCTCAGTCAAATGGAAGAAGGAAATGGAATGGTCTCTTTGACTAACTCGAATCGACGAAAGCCTGACCGACCGGTCCGAAGACCTGTCCCCTCTAGTCTAGAAAGGGATGAGGCTGACTCTCTGCTCCGTGCTAGTTTCATTCTGGAATAA
Protein sequence
METATNYGSWPRQGPRLRGDQSKREGLDEFFVNFIDPRVNEFFLCSSRGIADPMQTRTRSFRQQVSEDLPVTGNRRTNEHPAGEEANKRIEKFSQESNAEIRAGEFFRDEIESRSDRRGNLEGHKRKANNHHPNQNQMRKALSQMEEGNGMVSLTNSNRRKPDRPVRRPVPSSLERDEADSLLRASFILE
Homology
BLAST of MELO3C020343.jh1 vs. NCBI nr
Match:
KAA0048119.1 (uncharacterized protein E6C27_scaffold49288G00030 [Cucumis melo var. makuwa])
HSP 1 Score: 73.9 bits (180), Expect = 1.23e-12
Identity = 40/75 (53.33%), Postives = 47/75 (62.67%), Query Frame = 0
Query: 1 METATNYGSWPRQGPRLRGDQSKREGLDEFFVNFIDPRVNEFFLCSSRGIADP-----MQ 60
METATNYGSWPRQGPRLRGD+SKREGLDEFF+ R F ++ ++P
Sbjct: 83 METATNYGSWPRQGPRLRGDRSKREGLDEFFLGSSGERSQ--FAAENKTGSEPTFVRFFS 142
Query: 61 TRTRSFRQQVSEDLP 70
T+ SFR V LP
Sbjct: 143 TKHGSFRITVGRWLP 155
BLAST of MELO3C020343.jh1 vs. NCBI nr
Match:
KAG9140584.1 (hypothetical protein Leryth_024566 [Lithospermum erythrorhizon])
HSP 1 Score: 57.8 bits (138), Expect = 2.67e-07
Identity = 24/32 (75.00%), Postives = 28/32 (87.50%), Query Frame = 0
Query: 1 METATNYGSWPRQGPRLRGDQSKREGLDEFFV 32
METATNYGSWPRQ PR RGD+S+RE LD+ F+
Sbjct: 1 METATNYGSWPRQRPRRRGDRSQRERLDDVFI 32
BLAST of MELO3C020343.jh1 vs. NCBI nr
Match:
KAG8375566.1 (hypothetical protein BUALT_Bualt10G0113900 [Buddleja alternifolia])
HSP 1 Score: 57.4 bits (137), Expect = 5.38e-07
Identity = 24/32 (75.00%), Postives = 27/32 (84.38%), Query Frame = 0
Query: 1 METATNYGSWPRQGPRLRGDQSKREGLDEFFV 32
MET TNYGSWPRQ PR RGD+SKRE LD+ F+
Sbjct: 31 METPTNYGSWPRQRPRRRGDRSKRERLDDVFI 62
BLAST of MELO3C020343.jh1 vs. NCBI nr
Match:
CAB3504466.1 (unnamed protein product [Digitaria exilis])
HSP 1 Score: 57.8 bits (138), Expect = 6.54e-07
Identity = 33/73 (45.21%), Postives = 38/73 (52.05%), Query Frame = 0
Query: 1 METATNYGSWPRQGPRLRGDQSKREGLDEFFVNFIDPRVN---EFFLCSSRGIADPMQTR 60
METATNYGSWPRQ PR RGDQ+K+ LD+ R E S R T+
Sbjct: 42 METATNYGSWPRQRPRRRGDQNKKSRLDDDAQGLAGERSQSAAENKTASERTFVRFFSTK 101
Query: 61 TRSFRQQVSEDLP 70
RS R+ V LP
Sbjct: 102 HRSLRRTVGRWLP 114
BLAST of MELO3C020343.jh1 vs. NCBI nr
Match:
KAF5938786.1 (hypothetical protein HYC85_023045 [Camellia sinensis])
HSP 1 Score: 54.7 bits (130), Expect = 4.04e-06
Identity = 23/32 (71.88%), Postives = 26/32 (81.25%), Query Frame = 0
Query: 1 METATNYGSWPRQGPRLRGDQSKREGLDEFFV 32
METATNYGSWPRQ PR RGD+S RE LD+ +
Sbjct: 1 METATNYGSWPRQRPRRRGDRSNRERLDDVVI 32
BLAST of MELO3C020343.jh1 vs. ExPASy TrEMBL
Match:
A0A5A7U3U3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold49288G00030 PE=4 SV=1)
HSP 1 Score: 73.9 bits (180), Expect = 5.96e-13
Identity = 40/75 (53.33%), Postives = 47/75 (62.67%), Query Frame = 0
Query: 1 METATNYGSWPRQGPRLRGDQSKREGLDEFFVNFIDPRVNEFFLCSSRGIADP-----MQ 60
METATNYGSWPRQGPRLRGD+SKREGLDEFF+ R F ++ ++P
Sbjct: 83 METATNYGSWPRQGPRLRGDRSKREGLDEFFLGSSGERSQ--FAAENKTGSEPTFVRFFS 142
Query: 61 TRTRSFRQQVSEDLP 70
T+ SFR V LP
Sbjct: 143 TKHGSFRITVGRWLP 155
BLAST of MELO3C020343.jh1 vs. ExPASy TrEMBL
Match:
A0A7J7GHC6 (Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_023045 PE=4 SV=1)
HSP 1 Score: 54.7 bits (130), Expect = 1.96e-06
Identity = 23/32 (71.88%), Postives = 26/32 (81.25%), Query Frame = 0
Query: 1 METATNYGSWPRQGPRLRGDQSKREGLDEFFV 32
METATNYGSWPRQ PR RGD+S RE LD+ +
Sbjct: 1 METATNYGSWPRQRPRRRGDRSNRERLDDVVI 32
BLAST of MELO3C020343.jh1 vs. ExPASy TrEMBL
Match:
A0A453NT49 (Uncharacterized protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1)
HSP 1 Score: 53.1 bits (126), Expect = 4.32e-06
Identity = 22/29 (75.86%), Postives = 25/29 (86.21%), Query Frame = 0
Query: 1 METATNYGSWPRQGPRLRGDQSKREGLDE 29
METATNYGSWPRQ PR RGDQ+K+ LD+
Sbjct: 42 METATNYGSWPRQRPRRRGDQNKKSRLDD 70
BLAST of MELO3C020343.jh1 vs. ExPASy TrEMBL
Match:
A0A5C7GNT8 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_028282 PE=4 SV=1)
HSP 1 Score: 53.9 bits (128), Expect = 6.64e-06
Identity = 23/29 (79.31%), Postives = 25/29 (86.21%), Query Frame = 0
Query: 1 METATNYGSWPRQGPRLRGDQSKREGLDE 29
METATNYGSWPRQ PR RGD+S RE LD+
Sbjct: 1 METATNYGSWPRQRPRRRGDRSNRERLDD 29
BLAST of MELO3C020343.jh1 vs. ExPASy TrEMBL
Match:
A0A5C7GQF6 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_027771 PE=4 SV=1)
HSP 1 Score: 53.9 bits (128), Expect = 7.62e-06
Identity = 23/29 (79.31%), Postives = 25/29 (86.21%), Query Frame = 0
Query: 1 METATNYGSWPRQGPRLRGDQSKREGLDE 29
METATNYGSWPRQ PR RGD+S RE LD+
Sbjct: 1 METATNYGSWPRQRPRRRGDRSNRERLDD 29
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0048119.1 | 1.23e-12 | 53.33 | uncharacterized protein E6C27_scaffold49288G00030 [Cucumis melo var. makuwa] | [more] |
KAG9140584.1 | 2.67e-07 | 75.00 | hypothetical protein Leryth_024566 [Lithospermum erythrorhizon] | [more] |
KAG8375566.1 | 5.38e-07 | 75.00 | hypothetical protein BUALT_Bualt10G0113900 [Buddleja alternifolia] | [more] |
CAB3504466.1 | 6.54e-07 | 45.21 | unnamed protein product [Digitaria exilis] | [more] |
KAF5938786.1 | 4.04e-06 | 71.88 | hypothetical protein HYC85_023045 [Camellia sinensis] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7U3U3 | 5.96e-13 | 53.33 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A7J7GHC6 | 1.96e-06 | 71.88 | Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_023045 PE=4 SV=1 | [more] |
A0A453NT49 | 4.32e-06 | 75.86 | Uncharacterized protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 S... | [more] |
A0A5C7GNT8 | 6.64e-06 | 79.31 | Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_028282 PE=4 SV=1 | [more] |
A0A5C7GQF6 | 7.62e-06 | 79.31 | Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_027771 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |