MELO3C019363.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C019363.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	patellin-1-like
Location	chr11: 13509054 .. 13510135 (+)
RNA-Seq Expression	MELO3C019363.jh1
Synteny	MELO3C019363.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAACTAATTACAAATCTCAAATCATCTTTTACACACTGCCACTCCATTCTCTCTTCTCTGTCCTATAAAATCCACTCTGCTTCATCATTCTTCCATCCCATCCTTTCTTTCTCTTCTTCAATTCCTTCTCCTTTCCACAAGGATTTTAGCATGGCTACTGCTGAGGTAAATTTGGCTTCCGACAATCAAGCTTAAACTTTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTTTAAATAATCATAATTCAGAATCATATAACTATCTTTCTCGATACATTTGAATTTCTTTTATATATGGATATGTGAAATTCTTTTGAAATATTTTGAACAAATTTGGAACTGAGTCATTGTTCTTTCCAGGTTGTAACACCGGACACAGCTGTCCCAGAGGAAGCTACAGAGGTGGTGGAGGTGGAGGTACCAGCGCCCAAGGTTGAAGAAGAAGAAGCTCCGCCTCCGGTGGAAGCAGATCCTCCAGCGGAGGAGGTGGCAAAAGAAGAAGACGTCACGGATCCACCAGCGCTGGAAGAGACAGAAACACCGGTTGAATTTGAAACCAAGGAAGTAGTTGTAGAAGAAGAGTCGAAGGAAGAGAAGAATGAAGAAGAAGTAGTGGAAGAAGAAGAAAAGGAAGAGAAGAAAACAGAAGAAGCAGCTGAGGGTGCGGTTTTGGAGGAGACAAAGGCATCGGAGGCCGAGACACCGGTGGAGGAGGAGGAGGAGGAGAAGGCCGTGGAAGTGGTGGAAGAGAAGCCTGTAGAAGAAACAGAAGAGAAGCCAGAAGAAGAGGTTGAAGCAGAAAAGGCTGAGTAATTAAAACAGGATTACATATTATTGAGTGATGAAAAAAGTGAATGGAGGGTAGTTTGAGAAATTTGGTGTCTTTAAATTGTAGAGAGTTTGATTTTGTGTAATGTGAAAAGTGGTTGATTGAATGGGGATTGGGATGGAAGTGTAATAAAGCTATAAAAGGAGTATAGGGATTAGGGAACTTTGTATTTCTGTATCTTGGATGTCTGTTTCACAGTTGCAATTTGTTTTTGCTAGTTTGTTTGTTATAACAACTTA

mRNA sequence

AAAAACTAATTACAAATCTCAAATCATCTTTTACACACTGCCACTCCATTCTCTCTTCTCTGTCCTATAAAATCCACTCTGCTTCATCATTCTTCCATCCCATCCTTTCTTTCTCTTCTTCAATTCCTTCTCCTTTCCACAAGGATTTTAGCATGGCTACTGCTGAGGTTGTAACACCGGACACAGCTGTCCCAGAGGAAGCTACAGAGGTGGTGGAGGTGGAGGTACCAGCGCCCAAGGTTGAAGAAGAAGAAGCTCCGCCTCCGGTGGAAGCAGATCCTCCAGCGGAGGAGGTGGCAAAAGAAGAAGACGTCACGGATCCACCAGCGCTGGAAGAGACAGAAACACCGGTTGAATTTGAAACCAAGGAAGTAGTTGTAGAAGAAGAGTCGAAGGAAGAGAAGAATGAAGAAGAAGTAGTGGAAGAAGAAGAAAAGGAAGAGAAGAAAACAGAAGAAGCAGCTGAGGGTGCGGTTTTGGAGGAGACAAAGGCATCGGAGGCCGAGACACCGGTGGAGGAGGAGGAGGAGGAGAAGGCCGTGGAAGTGGTGGAAGAGAAGCCTGTAGAAGAAACAGAAGAGAAGCCAGAAGAAGAGGTTGAAGCAGAAAAGGCTGAGTAATTAAAACAGGATTACATATTATTGAGTGATGAAAAAAGTGAATGGAGGGTAGTTTGAGAAATTTGGTGTCTTTAAATTGTAGAGAGTTTGATTTTGTGTAATGTGAAAAGTGGTTGATTGAATGGGGATTGGGATGGAAGTGTAATAAAGCTATAAAAGGAGTATAGGGATTAGGGAACTTTGTATTTCTGTATCTTGGATGTCTGTTTCACAGTTGCAATTTGTTTTTGCTAGTTTGTTTGTTATAACAACTTA

Coding sequence (CDS)

ATGGCTACTGCTGAGGTTGTAACACCGGACACAGCTGTCCCAGAGGAAGCTACAGAGGTGGTGGAGGTGGAGGTACCAGCGCCCAAGGTTGAAGAAGAAGAAGCTCCGCCTCCGGTGGAAGCAGATCCTCCAGCGGAGGAGGTGGCAAAAGAAGAAGACGTCACGGATCCACCAGCGCTGGAAGAGACAGAAACACCGGTTGAATTTGAAACCAAGGAAGTAGTTGTAGAAGAAGAGTCGAAGGAAGAGAAGAATGAAGAAGAAGTAGTGGAAGAAGAAGAAAAGGAAGAGAAGAAAACAGAAGAAGCAGCTGAGGGTGCGGTTTTGGAGGAGACAAAGGCATCGGAGGCCGAGACACCGGTGGAGGAGGAGGAGGAGGAGAAGGCCGTGGAAGTGGTGGAAGAGAAGCCTGTAGAAGAAACAGAAGAGAAGCCAGAAGAAGAGGTTGAAGCAGAAAAGGCTGAGTAA

Protein sequence

MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPALEETETPVEFETKEVVVEEESKEEKNEEEVVEEEEKEEKKTEEAAEGAVLEETKASEAETPVEEEEEEKAVEVVEEKPVEETEEKPEEEVEAEKAE

Homology

[Close]

BLAST of MELO3C019363.jh1 vs. NCBI nr
Match: XP_008455963.1 (PREDICTED: patellin-1-like [Cucumis melo])

HSP 1 Score: 230 bits (586), Expect = 1.04e-74
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL 60
           MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL
Sbjct: 1   MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL 60

Query: 61  EETETPVEFETKEVVVEEESKEEKNEEEVVEEEEKEEKKTEEAAEGAVLEETKASEAETP 120
           EETETPVEFETKEVVVEEESKEEKNEEEVVEEEEKEEKKTEEAAEGAVLEETKASEAETP
Sbjct: 61  EETETPVEFETKEVVVEEESKEEKNEEEVVEEEEKEEKKTEEAAEGAVLEETKASEAETP 120

Query: 121 VEEEEEEKAVEVVEEKPVEETEEKPEEEVEAEKAE 155
           VEEEEEEKAVEVVEEKPVEETEEKPEEEVEAEKAE
Sbjct: 121 VEEEEEEKAVEVVEEKPVEETEEKPEEEVEAEKAE 155

[Close]

BLAST of MELO3C019363.jh1 vs. NCBI nr
Match: KAA0053292.1 (patellin-1-like [Cucumis melo var. makuwa])

HSP 1 Score: 230 bits (586), Expect = 1.43e-72
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL 60
           MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL
Sbjct: 1   MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL 60

Query: 61  EETETPVEFETKEVVVEEESKEEKNEEEVVEEEEKEEKKTEEAAEGAVLEETKASEAETP 120
           EETETPVEFETKEVVVEEESKEEKNEEEVVEEEEKEEKKTEEAAEGAVLEETKASEAETP
Sbjct: 61  EETETPVEFETKEVVVEEESKEEKNEEEVVEEEEKEEKKTEEAAEGAVLEETKASEAETP 120

Query: 121 VEEEEEEKAVEVVEEKPVEETEEKPEEEVEAEKAE 155
           VEEEEEEKAVEVVEEKPVEETEEKPEEEVEAEKAE
Sbjct: 121 VEEEEEEKAVEVVEEKPVEETEEKPEEEVEAEKAE 155

[Close]

BLAST of MELO3C019363.jh1 vs. NCBI nr
Match: XP_004140479.1 (cilia- and flagella-associated protein 251 [Cucumis sativus] >KGN46583.1 hypothetical protein Csa_004785 [Cucumis sativus])

HSP 1 Score: 161 bits (408), Expect = 9.72e-48
Identity = 128/156 (82.05%), Postives = 132/156 (84.62%), Query Frame = 0


Query: 1   MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL 60
           MATAEVVTP+TA+PEEATEVVEVEVP PKVEEEEAPPPVE DPPAEEVAKEEDVTDPPA+
Sbjct: 1   MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAPPPVEEDPPAEEVAKEEDVTDPPAV 60

Query: 61  EETETPVEFETKEVVVEEESKEEKNEEE-VVEEEEKEEKKTEEAAEGAVLEETKASEAET 120
           EE ETPVE ETKEVVVEEE+KEEKNEEE VVEEEEKEE KTEEAAE  V EETKA     
Sbjct: 61  EEAETPVEVETKEVVVEEEAKEEKNEEEEVVEEEEKEENKTEEAAEVVVEEETKA----- 120

Query: 121 PVEEEEEEKAVEVVEEKPVEETEEKPEEEVEAEKAE 155
           PVEE EE KAVEV   KP EE EEK EEEV AEK E
Sbjct: 121 PVEEAEE-KAVEV---KPAEEAEEKAEEEVGAEKVE 147

[Close]

BLAST of MELO3C019363.jh1 vs. NCBI nr
Match: XP_038900947.1 (cytochrome c1-like [Benincasa hispida] >XP_038900949.1 cytochrome c1-like [Benincasa hispida])

HSP 1 Score: 144 bits (362), Expect = 7.55e-41
Identity = 113/155 (72.90%), Postives = 119/155 (76.77%), Query Frame = 0


Query: 1   MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL 60
           MATAEVV P+T +PEEATEVVE  VP PKVEEEEAPPP   DPPAEEVAKEE+ TDPPA 
Sbjct: 1   MATAEVVPPETVLPEEATEVVE--VPPPKVEEEEAPPPAAVDPPAEEVAKEEEATDPPAA 60

Query: 61  EETETPVEFETKEVVVEEESKEEKNEEEVVEEEEKEEKKTEEAAEGAVLEETKASEAETP 120
           EETETPVE ETKEVVVEEE KEEK EEE         +K EEA E  V EE+K +EAE P
Sbjct: 61  EETETPVEVETKEVVVEEEPKEEKKEEE---------EKEEEAGEAVVEEESKPAEAEAP 120

Query: 121 VEEEEEEKAVEVVEEKPVEETEEKPEEEVEAEKAE 155
            EEE    AVEVVEEKPVEETEEKPEEE  AEKAE
Sbjct: 121 AEEE----AVEVVEEKPVEETEEKPEEEPAAEKAE 140

[Close]

BLAST of MELO3C019363.jh1 vs. NCBI nr
Match: XP_022971120.1 (fibrous sheath CABYR-binding protein-like [Cucurbita maxima])

HSP 1 Score: 57.4 bits (137), Expect = 5.49e-07
Identity = 73/128 (57.03%), Postives = 81/128 (63.28%), Query Frame = 0


Query: 1   MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL 60
           MATAEVVT + A+ EE TEV   EVP  KVEEE    P  ADPPAEEVAKEE      A 
Sbjct: 1   MATAEVVTQEPALQEEVTEV---EVPPLKVEEEA---PAAADPPAEEVAKEE------AA 60

Query: 61  EETETPVEFETKEVVVEEESKEEKNEEEVVEEEEKEEKKTEEAAEGAVLEETKA-SEAET 120
           E  E PVE ETKEVV +EE +E K  EEVVEE     KK  EAAE    E+ +A +E+E 
Sbjct: 61  EVAEPPVEVETKEVVAKEEEEEAK--EEVVEE-----KKEVEAAEVEAEEKEEAPAESEP 109

Query: 121 PVEEEEEE 127
            V EEEEE
Sbjct: 121 AVAEEEEE 109

[Close]

BLAST of MELO3C019363.jh1 vs. ExPASy TrEMBL
Match: A0A1S3C239 (patellin-1-like OS=Cucumis melo OX=3656 GN=LOC103496027 PE=4 SV=1)

HSP 1 Score: 230 bits (586), Expect = 5.03e-75
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL 60
           MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL
Sbjct: 1   MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL 60

Query: 61  EETETPVEFETKEVVVEEESKEEKNEEEVVEEEEKEEKKTEEAAEGAVLEETKASEAETP 120
           EETETPVEFETKEVVVEEESKEEKNEEEVVEEEEKEEKKTEEAAEGAVLEETKASEAETP
Sbjct: 61  EETETPVEFETKEVVVEEESKEEKNEEEVVEEEEKEEKKTEEAAEGAVLEETKASEAETP 120

Query: 121 VEEEEEEKAVEVVEEKPVEETEEKPEEEVEAEKAE 155
           VEEEEEEKAVEVVEEKPVEETEEKPEEEVEAEKAE
Sbjct: 121 VEEEEEEKAVEVVEEKPVEETEEKPEEEVEAEKAE 155

[Close]

BLAST of MELO3C019363.jh1 vs. ExPASy TrEMBL
Match: A0A5A7UC23 (Patellin-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G001030 PE=4 SV=1)

HSP 1 Score: 230 bits (586), Expect = 6.93e-73
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL 60
           MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL
Sbjct: 1   MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL 60

Query: 61  EETETPVEFETKEVVVEEESKEEKNEEEVVEEEEKEEKKTEEAAEGAVLEETKASEAETP 120
           EETETPVEFETKEVVVEEESKEEKNEEEVVEEEEKEEKKTEEAAEGAVLEETKASEAETP
Sbjct: 61  EETETPVEFETKEVVVEEESKEEKNEEEVVEEEEKEEKKTEEAAEGAVLEETKASEAETP 120

Query: 121 VEEEEEEKAVEVVEEKPVEETEEKPEEEVEAEKAE 155
           VEEEEEEKAVEVVEEKPVEETEEKPEEEVEAEKAE
Sbjct: 121 VEEEEEEKAVEVVEEKPVEETEEKPEEEVEAEKAE 155

[Close]

BLAST of MELO3C019363.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KAS3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G109780 PE=4 SV=1)

HSP 1 Score: 161 bits (408), Expect = 4.71e-48
Identity = 128/156 (82.05%), Postives = 132/156 (84.62%), Query Frame = 0


Query: 1   MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL 60
           MATAEVVTP+TA+PEEATEVVEVEVP PKVEEEEAPPPVE DPPAEEVAKEEDVTDPPA+
Sbjct: 1   MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAPPPVEEDPPAEEVAKEEDVTDPPAV 60

Query: 61  EETETPVEFETKEVVVEEESKEEKNEEE-VVEEEEKEEKKTEEAAEGAVLEETKASEAET 120
           EE ETPVE ETKEVVVEEE+KEEKNEEE VVEEEEKEE KTEEAAE  V EETKA     
Sbjct: 61  EEAETPVEVETKEVVVEEEAKEEKNEEEEVVEEEEKEENKTEEAAEVVVEEETKA----- 120

Query: 121 PVEEEEEEKAVEVVEEKPVEETEEKPEEEVEAEKAE 155
           PVEE EE KAVEV   KP EE EEK EEEV AEK E
Sbjct: 121 PVEEAEE-KAVEV---KPAEEAEEKAEEEVGAEKVE 147

[Close]

BLAST of MELO3C019363.jh1 vs. ExPASy TrEMBL
Match: A0A6J1I4V1 (fibrous sheath CABYR-binding protein-like OS=Cucurbita maxima OX=3661 GN=LOC111469887 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.66e-07
Identity = 73/128 (57.03%), Postives = 81/128 (63.28%), Query Frame = 0


Query: 1   MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL 60
           MATAEVVT + A+ EE TEV   EVP  KVEEE    P  ADPPAEEVAKEE      A 
Sbjct: 1   MATAEVVTQEPALQEEVTEV---EVPPLKVEEEA---PAAADPPAEEVAKEE------AA 60

Query: 61  EETETPVEFETKEVVVEEESKEEKNEEEVVEEEEKEEKKTEEAAEGAVLEETKA-SEAET 120
           E  E PVE ETKEVV +EE +E K  EEVVEE     KK  EAAE    E+ +A +E+E 
Sbjct: 61  EVAEPPVEVETKEVVAKEEEEEAK--EEVVEE-----KKEVEAAEVEAEEKEEAPAESEP 109

Query: 121 PVEEEEEE 127
            V EEEEE
Sbjct: 121 AVAEEEEE 109

[Close]

BLAST of MELO3C019363.jh1 vs. ExPASy TrEMBL
Match: A0A6J1G7J6 (enolase-phosphatase E1-like OS=Cucurbita moschata OX=3662 GN=LOC111451476 PE=4 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 1.30e-04
Identity = 86/164 (52.44%), Postives = 95/164 (57.93%), Query Frame = 0


Query: 1   MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL 60
           MATAEVVT + A+ EE TEV   EVP  KVEEE          PAEEVAKEE      A 
Sbjct: 1   MATAEVVTQEAALQEEVTEV---EVPPLKVEEEA---------PAEEVAKEE------AA 60

Query: 61  EETETPVEFETKEVVVEEESKEEKNEEEVVEEEEKE------EKKTEEAAEG--AVLEET 120
           E  E PV  ETKEVV EEE +EE  EE V E++E E      E+K E AAE   AV  E 
Sbjct: 61  EVAEPPVAVETKEVVAEEEEEEEAKEEVVEEKKEVEAAEVEAEEKEEAAAESEPAVAAEE 120

Query: 121 KASEAETPVEEEEEEKAVEVVEEKPVEETEEKP-EEEVEAEKAE 155
           +  EA+   E   EE+AVEV E    EE EEKP EEE  AEKAE
Sbjct: 121 EEEEAKPEAEPAAEEEAVEVKE-TAAEEAEEKPAEEEQAAEKAE 145

The following BLAST results are available for this feature:

BLAST of MELO3C019363.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008455963.1	1.04e-74	100.00	PREDICTED: patellin-1-like [Cucumis melo]	[more]
KAA0053292.1	1.43e-72	100.00	patellin-1-like [Cucumis melo var. makuwa]	[more]
XP_004140479.1	9.72e-48	82.05	cilia- and flagella-associated protein 251 [Cucumis sativus] >KGN46583.1 hypothe...	[more]
XP_038900947.1	7.55e-41	72.90	cytochrome c1-like [Benincasa hispida] >XP_038900949.1 cytochrome c1-like [Benin...	[more]
XP_022971120.1	5.49e-07	57.03	fibrous sheath CABYR-binding protein-like [Cucurbita maxima]	[more]

BLAST of MELO3C019363.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C019363.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C239	5.03e-75	100.00	patellin-1-like OS=Cucumis melo OX=3656 GN=LOC103496027 PE=4 SV=1	[more]
A0A5A7UC23	6.93e-73	100.00	Patellin-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G0010...	[more]
A0A0A0KAS3	4.71e-48	82.05	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G109780 PE=4 SV=1	[more]
A0A6J1I4V1	2.66e-07	57.03	fibrous sheath CABYR-binding protein-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1G7J6	1.30e-04	52.44	enolase-phosphatase E1-like OS=Cucurbita moschata OX=3662 GN=LOC111451476 PE=4 S...	[more]

BLAST of MELO3C019363.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 75..110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..155
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 80..95
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 96..116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..79

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C019363.jh1.t1	MELO3C019363.jh1.t1	mRNA