MELO3C019344 (gene) Melon (DHL92) v4

Overview


Name	MELO3C019344
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Drebrin-like
Location	chr11: 12071887 .. 12072300 (-)
RNA-Seq Expression	MELO3C019344
Synteny	MELO3C019344

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGATTCCAAAGGGCGCCAAGTCTTTCCCTTCCATGATGGAGAAACTCTATTTGAAGCACATCCCCTCCCTCGCCATGCTACCTCAAAGAAAAATTCCAAGTAGGGTCTACAATCAGACGACGCTCAATAGAGTCATCACATTCCATCAAAATAAGGAAGAGGAGTATCACCTGAAAACACTAGGCCATGAGAAGGAGCCTAAGGGGATGGAAGACAAAGAAGACTTGCCTTTACCACTGCCAATGAAAAGGACAATCGCATCAACTTCCATGCAACTTGGGAAGAAATTAAAAGTTGATGCCACTAAACAAGTGGCCAAGGAAAATAATTCCACTCACTGCAAGAAAGTGGTCCAAAGAATTCCACTCAATGATGACCGCATCTCCCGCCTCGCTACTTTAAAGACCTAA

mRNA sequence

ATGGAGATTCCAAAGGGCGCCAAGTCTTTCCCTTCCATGATGGAGAAACTCTATTTGAAGCACATCCCCTCCCTCGCCATGCTACCTCAAAGAAAAATTCCAAGTAGGGTCTACAATCAGACGACGCTCAATAGAGTCATCACATTCCATCAAAATAAGGAAGAGGAGTATCACCTGAAAACACTAGGCCATGAGAAGGAGCCTAAGGGGATGGAAGACAAAGAAGACTTGCCTTTACCACTGCCAATGAAAAGGACAATCGCATCAACTTCCATGCAACTTGGGAAGAAATTAAAAGTTGATGCCACTAAACAAGTGGCCAAGGAAAATAATTCCACTCACTGCAAGAAAGTGGTCCAAAGAATTCCACTCAATGATGACCGCATCTCCCGCCTCGCTACTTTAAAGACCTAA

Coding sequence (CDS)

ATGGAGATTCCAAAGGGCGCCAAGTCTTTCCCTTCCATGATGGAGAAACTCTATTTGAAGCACATCCCCTCCCTCGCCATGCTACCTCAAAGAAAAATTCCAAGTAGGGTCTACAATCAGACGACGCTCAATAGAGTCATCACATTCCATCAAAATAAGGAAGAGGAGTATCACCTGAAAACACTAGGCCATGAGAAGGAGCCTAAGGGGATGGAAGACAAAGAAGACTTGCCTTTACCACTGCCAATGAAAAGGACAATCGCATCAACTTCCATGCAACTTGGGAAGAAATTAAAAGTTGATGCCACTAAACAAGTGGCCAAGGAAAATAATTCCACTCACTGCAAGAAAGTGGTCCAAAGAATTCCACTCAATGATGACCGCATCTCCCGCCTCGCTACTTTAAAGACCTAA

Protein sequence

MEIPKGAKSFPSMMEKLYLKHIPSLAMLPQRKIPSRVYNQTTLNRVITFHQNKEEEYHLKTLGHEKEPKGMEDKEDLPLPLPMKRTIASTSMQLGKKLKVDATKQVAKENNSTHCKKVVQRIPLNDDRISRLATLKT

Homology

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BLAST of MELO3C019344 vs. NCBI nr
Match: TYJ97633.1 (hypothetical protein E5676_scaffold469G00170 [Cucumis melo var. makuwa])

HSP 1 Score: 233.4 bits (594), Expect = 1.2e-57
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MEIPKGAKSFPSMMEKLYLKHIPSLAMLPQRKIPSRVYNQTTLNRVITFHQNKEEEYHLK 60
           MEIPKGAKSFPSMMEKLYLKHIPSLAMLPQRKIPSRVYNQTTLNRVITFHQNKEEEYHLK
Sbjct: 152 MEIPKGAKSFPSMMEKLYLKHIPSLAMLPQRKIPSRVYNQTTLNRVITFHQNKEEEYHLK 211

Query: 61  TLGHEKEPKGMEDKEDLPLPLPMKRTIASTSMQLGKKLKVDATKQVAKENNSTHCKKV 119
           TLGHEKEPKGMEDKEDLPLPLPMKRTIASTSMQLGKKLKVDATKQVAKENNSTHCKKV
Sbjct: 212 TLGHEKEPKGMEDKEDLPLPLPMKRTIASTSMQLGKKLKVDATKQVAKENNSTHCKKV 269

[Close]

BLAST of MELO3C019344 vs. NCBI nr
Match: KAA0053237.1 (hypothetical protein E6C27_scaffold102G00220 [Cucumis melo var. makuwa])

HSP 1 Score: 228.8 bits (582), Expect = 2.8e-56
Identity = 116/118 (98.31%), Postives = 117/118 (99.15%), Query Frame = 0


Query: 1   MEIPKGAKSFPSMMEKLYLKHIPSLAMLPQRKIPSRVYNQTTLNRVITFHQNKEEEYHLK 60
           MEIPKGAKSFPSMMEKLYLKHIPSLAMLPQRKIPSRVYNQTTLNRVITFHQNKEEEYHLK
Sbjct: 152 MEIPKGAKSFPSMMEKLYLKHIPSLAMLPQRKIPSRVYNQTTLNRVITFHQNKEEEYHLK 211

Query: 61  TLGHEKEPKGMEDKEDLPLPLPMKRTIASTSMQLGKKLKVDATKQVAKENNSTHCKKV 119
           TLGHEKEP+GMEDKEDLPL LPMKRTIASTSMQLGKKLKVDATKQVAKENNSTHCKKV
Sbjct: 212 TLGHEKEPEGMEDKEDLPLSLPMKRTIASTSMQLGKKLKVDATKQVAKENNSTHCKKV 269

[Close]

BLAST of MELO3C019344 vs. NCBI nr
Match: KAA0047718.1 (hypothetical protein E6C27_scaffold115G002320 [Cucumis melo var. makuwa] >TYK08372.1 hypothetical protein E5676_scaffold648G001850 [Cucumis melo var. makuwa])

HSP 1 Score: 94.7 bits (234), Expect = 6.4e-16
Identity = 55/104 (52.88%), Postives = 71/104 (68.27%), Query Frame = 0


Query: 1   MEIPKGAKSFPSMMEKLYLKHIPSLAMLPQRKIPSRVYNQTTLNRVITFHQNKEEEYHLK 60
           ME P GA  F S +EKL L+ IPSL    Q+ I  RVY Q+ LNRVI  HQNK+EE +LK
Sbjct: 89  METPNGAMPFSSKVEKLCLRFIPSLTRYSQQDILGRVYTQSELNRVIILHQNKKEERNLK 148

Query: 61  TLGHEKEPKGMEDKEDLPLPLPMKRTIASTSMQLGKKLKVDATK 105
           T+G  ++P+GM++K+  PL +P+KR +A T MQ   K KVDA K
Sbjct: 149 TVGRIRDPEGMKEKKIHPL-VPVKRKVALTLMQPANKPKVDAIK 191

[Close]

BLAST of MELO3C019344 vs. NCBI nr
Match: TYK14602.1 (hypothetical protein E5676_scaffold552G001110 [Cucumis melo var. makuwa])

HSP 1 Score: 78.2 bits (191), Expect = 6.2e-11
Identity = 48/97 (49.48%), Postives = 61/97 (62.89%), Query Frame = 0


Query: 25  LAMLPQRKIPSRVYNQTTLNRVITFHQNKEEEYHLKTLGHEKEPKGMEDKEDLPLPLPMK 84
           +A+L +++ P     + TLNRVITFHQNKEEE+HLKTLG +K  +G ED      P P+K
Sbjct: 2   VAVLCEKEDPPYAACEATLNRVITFHQNKEEEHHLKTLGKDKADEG-EDGNKSRTPPPLK 61

Query: 85  RTIASTSMQLGKKLKVDATKQVAKENNSTHCKKVVQR 122
           R   ST     KKLKVDAT + A  +   H KKVV +
Sbjct: 62  RNAKSTLTPPVKKLKVDATVEKASASKPPHSKKVVSK 97

[Close]

BLAST of MELO3C019344 vs. NCBI nr
Match: KAA0040817.1 (hypothetical protein E6C27_scaffold333G00350 [Cucumis melo var. makuwa] >TYK17794.1 hypothetical protein E5676_scaffold306G00400 [Cucumis melo var. makuwa])

HSP 1 Score: 76.6 bits (187), Expect = 1.8e-10
Identity = 51/102 (50.00%), Postives = 61/102 (59.80%), Query Frame = 0


Query: 1   MEIPKGAKSFPSMMEKLYLKHIPSLAMLPQRKIPSRVYNQTTLNRVITFHQNKEEEYHLK 60
           ME PKG K FP  MEKL LK+IPSL  LPQ  +     +   LNRVITF+QNKEEE  +K
Sbjct: 9   MEHPKGVKPFPKTMEKLCLKYIPSLKELPQENMVEGRCSLAGLNRVITFYQNKEEERCIK 68

Query: 61  TLGHEKEPKGMEDKEDLPLPLPMKRTIASTSMQLGKKLKVDA 103
           TLG +K  +  E  +  P P  +KR   STS    K  KVD+
Sbjct: 69  TLGKKKLEEDSEG-DTSPPPPSLKRKGRSTSSPPIKNAKVDS 109

[Close]

BLAST of MELO3C019344 vs. ExPASy TrEMBL
Match: A0A5D3BEA4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold469G00170 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 5.6e-58
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MEIPKGAKSFPSMMEKLYLKHIPSLAMLPQRKIPSRVYNQTTLNRVITFHQNKEEEYHLK 60
           MEIPKGAKSFPSMMEKLYLKHIPSLAMLPQRKIPSRVYNQTTLNRVITFHQNKEEEYHLK
Sbjct: 152 MEIPKGAKSFPSMMEKLYLKHIPSLAMLPQRKIPSRVYNQTTLNRVITFHQNKEEEYHLK 211

Query: 61  TLGHEKEPKGMEDKEDLPLPLPMKRTIASTSMQLGKKLKVDATKQVAKENNSTHCKKV 119
           TLGHEKEPKGMEDKEDLPLPLPMKRTIASTSMQLGKKLKVDATKQVAKENNSTHCKKV
Sbjct: 212 TLGHEKEPKGMEDKEDLPLPLPMKRTIASTSMQLGKKLKVDATKQVAKENNSTHCKKV 269

[Close]

BLAST of MELO3C019344 vs. ExPASy TrEMBL
Match: A0A5A7UFG4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00220 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.4e-56
Identity = 116/118 (98.31%), Postives = 117/118 (99.15%), Query Frame = 0


Query: 1   MEIPKGAKSFPSMMEKLYLKHIPSLAMLPQRKIPSRVYNQTTLNRVITFHQNKEEEYHLK 60
           MEIPKGAKSFPSMMEKLYLKHIPSLAMLPQRKIPSRVYNQTTLNRVITFHQNKEEEYHLK
Sbjct: 152 MEIPKGAKSFPSMMEKLYLKHIPSLAMLPQRKIPSRVYNQTTLNRVITFHQNKEEEYHLK 211

Query: 61  TLGHEKEPKGMEDKEDLPLPLPMKRTIASTSMQLGKKLKVDATKQVAKENNSTHCKKV 119
           TLGHEKEP+GMEDKEDLPL LPMKRTIASTSMQLGKKLKVDATKQVAKENNSTHCKKV
Sbjct: 212 TLGHEKEPEGMEDKEDLPLSLPMKRTIASTSMQLGKKLKVDATKQVAKENNSTHCKKV 269

[Close]

BLAST of MELO3C019344 vs. ExPASy TrEMBL
Match: A0A5D3CAP7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G001850 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 3.1e-16
Identity = 55/104 (52.88%), Postives = 71/104 (68.27%), Query Frame = 0


Query: 1   MEIPKGAKSFPSMMEKLYLKHIPSLAMLPQRKIPSRVYNQTTLNRVITFHQNKEEEYHLK 60
           ME P GA  F S +EKL L+ IPSL    Q+ I  RVY Q+ LNRVI  HQNK+EE +LK
Sbjct: 89  METPNGAMPFSSKVEKLCLRFIPSLTRYSQQDILGRVYTQSELNRVIILHQNKKEERNLK 148

Query: 61  TLGHEKEPKGMEDKEDLPLPLPMKRTIASTSMQLGKKLKVDATK 105
           T+G  ++P+GM++K+  PL +P+KR +A T MQ   K KVDA K
Sbjct: 149 TVGRIRDPEGMKEKKIHPL-VPVKRKVALTLMQPANKPKVDAIK 191

[Close]

BLAST of MELO3C019344 vs. ExPASy TrEMBL
Match: A0A5D3CT45 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G001110 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 3.0e-11
Identity = 48/97 (49.48%), Postives = 61/97 (62.89%), Query Frame = 0


Query: 25  LAMLPQRKIPSRVYNQTTLNRVITFHQNKEEEYHLKTLGHEKEPKGMEDKEDLPLPLPMK 84
           +A+L +++ P     + TLNRVITFHQNKEEE+HLKTLG +K  +G ED      P P+K
Sbjct: 2   VAVLCEKEDPPYAACEATLNRVITFHQNKEEEHHLKTLGKDKADEG-EDGNKSRTPPPLK 61

Query: 85  RTIASTSMQLGKKLKVDATKQVAKENNSTHCKKVVQR 122
           R   ST     KKLKVDAT + A  +   H KKVV +
Sbjct: 62  RNAKSTLTPPVKKLKVDATVEKASASKPPHSKKVVSK 97

[Close]

BLAST of MELO3C019344 vs. ExPASy TrEMBL
Match: A0A5A7TGV6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G00400 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 8.8e-11
Identity = 51/102 (50.00%), Postives = 61/102 (59.80%), Query Frame = 0


Query: 1   MEIPKGAKSFPSMMEKLYLKHIPSLAMLPQRKIPSRVYNQTTLNRVITFHQNKEEEYHLK 60
           ME PKG K FP  MEKL LK+IPSL  LPQ  +     +   LNRVITF+QNKEEE  +K
Sbjct: 9   MEHPKGVKPFPKTMEKLCLKYIPSLKELPQENMVEGRCSLAGLNRVITFYQNKEEERCIK 68

Query: 61  TLGHEKEPKGMEDKEDLPLPLPMKRTIASTSMQLGKKLKVDA 103
           TLG +K  +  E  +  P P  +KR   STS    K  KVD+
Sbjct: 69  TLGKKKLEEDSEG-DTSPPPPSLKRKGRSTSSPPIKNAKVDS 109

The following BLAST results are available for this feature:

BLAST of MELO3C019344 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ97633.1	1.2e-57	100.00	hypothetical protein E5676_scaffold469G00170 [Cucumis melo var. makuwa]	[more]
KAA0053237.1	2.8e-56	98.31	hypothetical protein E6C27_scaffold102G00220 [Cucumis melo var. makuwa]	[more]
KAA0047718.1	6.4e-16	52.88	hypothetical protein E6C27_scaffold115G002320 [Cucumis melo var. makuwa] >TYK083...	[more]
TYK14602.1	6.2e-11	49.48	hypothetical protein E5676_scaffold552G001110 [Cucumis melo var. makuwa]	[more]
KAA0040817.1	1.8e-10	50.00	hypothetical protein E6C27_scaffold333G00350 [Cucumis melo var. makuwa] >TYK1779...	[more]

BLAST of MELO3C019344 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C019344 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BEA4	5.6e-58	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7UFG4	1.4e-56	98.31	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3CAP7	3.1e-16	52.88	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3CT45	3.0e-11	49.48	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TGV6	8.8e-11	50.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of MELO3C019344 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C019344.1	MELO3C019344.1	mRNA