MELO3C018985 (gene) Melon (DHL92) v4

Overview
NameMELO3C018985
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
Description60S acidic ribosomal protein P1-like
Locationchr07: 14571812 .. 14573386 (-)
RNA-Seq ExpressionMELO3C018985
SyntenyMELO3C018985
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAAAACCCTAAATCCTAACACCTCTTCGCTCAATATATATTCCGATTCAGAGCAGTGGCGATCACCGTAAGCGCATTTTGCCTCCCAATCGTCTCCTAGTATGTTCCTCATCTGAGATCTTCATTATTCAATCTTGCTTCTCTTTCTCCATCGTTTTCTAATGCTTTTCGAGTTCTGATTGTTTAATTCGCATATCAGGCCATCTATTAGCCATGTCTACCAGTGAACTCGCCTGCGCCTACGCCGCCCTGGCTCTTCACGACGATGGAATCGCAATCACTGTACCAATCATTATCTTTCCTTGTATATATCATTTTTCCTTCTTTGGATTGTTTGATGCGTGATTAATTTGCCTATTGGGTTTAGGCGGAAAAGATTGCAGCCGTTGTAGCAGCTGCGGGGCTCTGTGTAGAATCTTACTGGCCTAGCTTGTTTGCTAAATTGGCGGAGAAGAGGAACATTGGGGATCTTCTTCTTAATGTTGGATGTGGAGGTGGCGCTGCGGCTCCCGTGGCTGTAGCTGCTCCTACCGCTAGTGCTGCTGCCGCTTCTGCCATCGAGGAAAAGAAGGTATGGTGATGAATGTTTAACTGTTCTTGTAGTGAATCTTTCTGTAGATGCCCTCCTCATTTTAACAAACTCCTTTACTTCTCTGTACCTGCTAGCTCTAAATTTCCATTTACGCGCGATTTTGAATAAGGATCTCTTTCGTATATATCCATATAACACACGTCCTAATACTATTAGTTACTGCTGAATTAGTTAAGTATGAAAAAAAATGAACTCTTTAACTGTTGCCAATATAGTTTTTTTTTTTTTTTTTTGTAATCAACCCGTTAGGTAGTTCTTAATATTCCTTTGAACTTTTGAAGTTTAGGTTTTCATGTATCCAAGAGAGAGATTCAATAGAAAATTGAATATTGATGAGGGTAGTTTGTACTTTTAGAAATTTTAACTGCCACCTTCATTGATTGAAATATTAGTGAATTAGATCTTTATCGTTGCTATTTAGTTTCATTCGCCTCCTTTTTCCCTTTTCTTCGATTTGTTCATTTAAGTCAACTATGCAGGAGGAGCCAAAGGAGGAGAGCGACGATGACATGGGATTCAGCTTATTCGATTAAGAGGCTTTCTTTAGTTTTGTAGGATTTTATTAGGAAACTATTGGGTGGGTAGCTTAATCTTGATTTTCCGCTGTTGGTCTCAAGATTTGTTTTTTTTACTAGGCCGTTTTGAGTTTTGATTTGCCTTCAATGTACGATGGTAACTGCATCTTTTCACTCCTTTTTCTTAACTACACATTGGAATGAGATCAAACTTTATGAGAGGAATTCTTTGGTTAAACCCTGGAACCACGTTTTCTTGGTTTATGATTTCTAGGTTTAGTTAATAAGCACTTTTGAAATTACATTATATTTCGTTTCAAACATTCTTTTCAGTAAATTCTTTTTGAAAATGATATTAATGAAAACTCATCTATATCAATGATTTTTTTGAATTATTTCTAGTTGATAGCATTTGCTCTCTTCTTTTATTTATTGAAGTTGTAACAATAATATTGGGCTTTAAACAAT

mRNA sequence

GAAAAACCCTAAATCCTAACACCTCTTCGCTCAATATATATTCCGATTCAGAGCAGTGGCGATCACCGTAAGCGCATTTTGCCTCCCAATCGTCTCCTAGTATGTTCCTCATCTGAGATCTTCATTATTCAATCTTGCTTCTCTTTCTCCATCGTTTTCTAATGCTTTTCGAGTTCTGATTGTTTAATTCGCATATCAGGCCATCTATTAGCCATGTCTACCAGTGAACTCGCCTGCGCCTACGCCGCCCTGGCTCTTCACGACGATGGAATCGCAATCACTGCGGAAAAGATTGCAGCCGTTGTAGCAGCTGCGGGGCTCTGTGTAGAATCTTACTGGCCTAGCTTGTTTGCTAAATTGGCGGAGAAGAGGAACATTGGGGATCTTCTTCTTAATGTTGGATGTGGAGGTGGCGCTGCGGCTCCCGTGGCTGTAGCTGCTCCTACCGCTAGTGCTGCTGCCGCTTCTGCCATCGAGGAAAAGAAGGAGGAGCCAAAGGAGGAGAGCGACGATGACATGGGATTCAGCTTATTCGATTAAGAGGCTTTCTTTAGTTTTGTAGGATTTTATTAGGAAACTATTGGGTGGGTAGCTTAATCTTGATTTTCCGCTGTTGGTCTCAAGATTTGTTTTTTTTACTAGGCCGTTTTGAGTTTTGATTTGCCTTCAATGTACGATGGTAACTGCATCTTTTCACTCCTTTTTCTTAACTACACATTGGAATGAGATCAAACTTTATGAGAGGAATTCTTTGGTTAAACCCTGGAACCACGTTTTCTTGGTTTATGATTTCTAGGTTTAGTTAATAAGCACTTTTGAAATTACATTATATTTCGTTTCAAACATTCTTTTCAGTAAATTCTTTTTGAAAATGATATTAATGAAAACTCATCTATATCAATGATTTTTTTGAATTATTTCTAGTTGATAGCATTTGCTCTCTTCTTTTATTTATTGAAGTTGTAACAATAATATTGGGCTTTAAACAAT

Coding sequence (CDS)

ATGTCTACCAGTGAACTCGCCTGCGCCTACGCCGCCCTGGCTCTTCACGACGATGGAATCGCAATCACTGCGGAAAAGATTGCAGCCGTTGTAGCAGCTGCGGGGCTCTGTGTAGAATCTTACTGGCCTAGCTTGTTTGCTAAATTGGCGGAGAAGAGGAACATTGGGGATCTTCTTCTTAATGTTGGATGTGGAGGTGGCGCTGCGGCTCCCGTGGCTGTAGCTGCTCCTACCGCTAGTGCTGCTGCCGCTTCTGCCATCGAGGAAAAGAAGGAGGAGCCAAAGGAGGAGAGCGACGATGACATGGGATTCAGCTTATTCGATTAA

Protein sequence

MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVAVAAPTASAAAASAIEEKKEEPKEESDDDMGFSLFD
Homology
[Close]
BLAST of MELO3C018985 vs. NCBI nr
Match: XP_008455614.1 (PREDICTED: 60S acidic ribosomal protein P1-like isoform X1 [Cucumis melo])

HSP 1 Score: 199.5 bits (506), Expect = 1.5e-47
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0 

Query: 1   MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL 60
           MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL
Sbjct: 1   MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL 60

Query: 61  NVGCGGGAAAPVAVAAPTASAAAASAIEEKKEEPKEESDDDMGFSLFD 109
           NVGCGGGAAAPVAVAAPTASAAAASAIEEKKEEPKEESDDDMGFSLFD
Sbjct: 61  NVGCGGGAAAPVAVAAPTASAAAASAIEEKKEEPKEESDDDMGFSLFD 108

[Close]
BLAST of MELO3C018985 vs. NCBI nr
Match: KAA0045366.1 (60S acidic ribosomal protein P1-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 198.0 bits (502), Expect = 4.2e-47
Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = 0 

Query: 1   MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL 60
           MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL
Sbjct: 1   MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL 60

Query: 61  NVGCGGGAAAPVAVAAPTASAAAASAIEEKKEEPKEESDDDMGFSLFD 109
           NVGCGGGAAAPVAVAAPTASAA ASAIEEKKEEPKEESDDDMGFSLFD
Sbjct: 61  NVGCGGGAAAPVAVAAPTASAAVASAIEEKKEEPKEESDDDMGFSLFD 108

[Close]
BLAST of MELO3C018985 vs. NCBI nr
Match: XP_038905168.1 (60S acidic ribosomal protein P1-like [Benincasa hispida])

HSP 1 Score: 193.7 bits (491), Expect = 8.0e-46
Identity = 104/108 (96.30%), Postives = 105/108 (97.22%), Query Frame = 0 

Query: 1   MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL 60
           MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL
Sbjct: 1   MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL 60

Query: 61  NVGCGGGAAAPVAVAAPTASAAAASAIEEKKEEPKEESDDDMGFSLFD 109
           NVGCGGGAAAPVAVAAP  SAAAA A+EEKKEEPKEESDDDMGFSLFD
Sbjct: 61  NVGCGGGAAAPVAVAAPAVSAAAAPAVEEKKEEPKEESDDDMGFSLFD 108

[Close]
BLAST of MELO3C018985 vs. NCBI nr
Match: XP_004138012.2 (60S acidic ribosomal protein P1 [Cucumis sativus] >KGN63426.1 hypothetical protein Csa_013711 [Cucumis sativus])

HSP 1 Score: 193.4 bits (490), Expect = 1.0e-45
Identity = 105/108 (97.22%), Postives = 106/108 (98.15%), Query Frame = 0 

Query: 1   MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL 60
           MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL
Sbjct: 1   MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL 60

Query: 61  NVGCGGGAAAPVAVAAPTASAAAASAIEEKKEEPKEESDDDMGFSLFD 109
           NVGCGGGAAA VAVAAPTASAAAA AIEEK+EEPKEESDDDMGFSLFD
Sbjct: 61  NVGCGGGAAASVAVAAPTASAAAAPAIEEKREEPKEESDDDMGFSLFD 108

[Close]
BLAST of MELO3C018985 vs. NCBI nr
Match: XP_038905286.1 (60S acidic ribosomal protein P1-like [Benincasa hispida])

HSP 1 Score: 189.5 bits (480), Expect = 1.5e-44
Identity = 102/108 (94.44%), Postives = 104/108 (96.30%), Query Frame = 0 

Query: 1   MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL 60
           MSTSELACAYAALALHDDGIAITAEKIAAV+AAAGL VESYWPSLFAKLAEKRNIGDLLL
Sbjct: 1   MSTSELACAYAALALHDDGIAITAEKIAAVIAAAGLSVESYWPSLFAKLAEKRNIGDLLL 60

Query: 61  NVGCGGGAAAPVAVAAPTASAAAASAIEEKKEEPKEESDDDMGFSLFD 109
           NVGCGGGAAAPVAVAAP  SAAAA A+EEKKEEPKEESDDDMGFSLFD
Sbjct: 61  NVGCGGGAAAPVAVAAPAVSAAAAPAVEEKKEEPKEESDDDMGFSLFD 108

[Close]
BLAST of MELO3C018985 vs. ExPASy Swiss-Prot
Match: P52855 (60S acidic ribosomal protein P1 OS=Zea mays OX=4577 GN=RPP1A PE=1 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 2.8e-33
Identity = 82/110 (74.55%), Postives = 92/110 (83.64%), Query Frame = 0 

Query: 1   MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL 60
           M++ ELAC YAAL L DDGIAITAEKIA +V AA + VESYWP+LFAKL EKRN+ DL+L
Sbjct: 1   MASGELACRYAALILSDDGIAITAEKIATIVKAANIKVESYWPALFAKLLEKRNVEDLIL 60

Query: 61  NVGCGGGAAAPVAVAAPT--ASAAAASAIEEKKEEPKEESDDDMGFSLFD 109
           +VG GGG AAPVA AAP   A+AAAA A+EEKKEE KEESDDDMGFSLFD
Sbjct: 61  SVGSGGG-AAPVAAAAPAGGAAAAAAPAVEEKKEEAKEESDDDMGFSLFD 109

[Close]
BLAST of MELO3C018985 vs. ExPASy Swiss-Prot
Match: Q8LCW9 (60S acidic ribosomal protein P1-1 OS=Arabidopsis thaliana OX=3702 GN=RPP1A PE=3 SV=2)

HSP 1 Score: 131.7 bits (330), Expect = 4.9e-30
Identity = 73/112 (65.18%), Postives = 89/112 (79.46%), Query Frame = 0 

Query: 1   MST-SELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLL 60
           MST  ELAC+YA + L D+GIAITA+KIA +V AAG+ +ESYWP LFAK+AEKRN+ DL+
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVSIESYWPMLFAKMAEKRNVTDLI 60

Query: 61  LNVGCGGGAAAPVAVAAPTA---SAAAASAIEEKKEEPKEESDDDMGFSLFD 109
           +NVG GGG  APVA AAP A   +AAA +A E+KK+EP EESD D+GF LFD
Sbjct: 61  MNVGAGGGGGAPVAAAAPAAGGGAAAAPAAEEKKKDEPAEESDGDLGFGLFD 112

[Close]
BLAST of MELO3C018985 vs. ExPASy Swiss-Prot
Match: Q8LEQ0 (60S acidic ribosomal protein P1-3 OS=Arabidopsis thaliana OX=3702 GN=RPP1C PE=1 SV=2)

HSP 1 Score: 131.3 bits (329), Expect = 6.4e-30
Identity = 73/113 (64.60%), Postives = 89/113 (78.76%), Query Frame = 0 

Query: 1   MST-SELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLL 60
           MST  ELAC+YA + L D+GIAITA+KIA +V AAG+ +ESYWP LFAK+AEKRN+ DL+
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVTIESYWPMLFAKMAEKRNVTDLI 60

Query: 61  LNVGCGGGAAAPVAVAAPT----ASAAAASAIEEKKEEPKEESDDDMGFSLFD 109
           +NVG GGG  APVA AAP     A+AAA +A E+KK+EP EESD D+GF LFD
Sbjct: 61  MNVGAGGGGGAPVAAAAPAAGGGAAAAAPAAEEKKKDEPAEESDGDLGFGLFD 113

[Close]
BLAST of MELO3C018985 vs. ExPASy Swiss-Prot
Match: O23095 (60S acidic ribosomal protein P1-2 OS=Arabidopsis thaliana OX=3702 GN=RPP1B PE=1 SV=2)

HSP 1 Score: 126.3 bits (316), Expect = 2.1e-28
Identity = 73/113 (64.60%), Postives = 89/113 (78.76%), Query Frame = 0 

Query: 1   MST-SELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLL 60
           MST  ELAC+YA + L D+GIAIT++KIA +V AAG+ +ESYWP LFAK+AEKRN+ DL+
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITSDKIATLVKAAGVEIESYWPMLFAKMAEKRNVTDLI 60

Query: 61  LNVGC-GGGAAAPVAVAAPTA---SAAAASAIEEKKEEPKEESDDDMGFSLFD 109
           +NVG  GGG  APV+ AAP A   +AAAA A EEKK+EP EESD D+GF LFD
Sbjct: 61  MNVGAGGGGGGAPVSAAAPAAAGGAAAAAPAKEEKKDEPAEESDGDLGFGLFD 113

[Close]
BLAST of MELO3C018985 vs. ExPASy Swiss-Prot
Match: P29763 (60S acidic ribosomal protein P1 OS=Chlamydomonas reinhardtii OX=3055 PE=3 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.4e-24
Identity = 67/109 (61.47%), Postives = 79/109 (72.48%), Query Frame = 0 

Query: 1   MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL 60
           MSTSELAC YAAL LHDDG+ ITA+ I  +  AAG+ VE YWP+LFAKL  K+++ DL+ 
Sbjct: 1   MSTSELACTYAALILHDDGLEITADNINTICKAAGVEVEGYWPALFAKLFAKKSMDDLIT 60

Query: 61  NVGCGGGAAAPVAVAAPTASAAAASAIEEKKEEPKEES-DDDMGFSLFD 109
           NVG GGGAA   A AAP A  A A+    KKEE KE S ++DMGFSLFD
Sbjct: 61  NVGAGGGAAP--AAAAPAAGGAPAAGAAPKKEEKKEPSEEEDMGFSLFD 107

[Close]
BLAST of MELO3C018985 vs. ExPASy TrEMBL
Match: A0A1S3C0X1 (60S acidic ribosomal protein P1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495745 PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 7.1e-48
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0 

Query: 1   MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL 60
           MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL
Sbjct: 1   MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL 60

Query: 61  NVGCGGGAAAPVAVAAPTASAAAASAIEEKKEEPKEESDDDMGFSLFD 109
           NVGCGGGAAAPVAVAAPTASAAAASAIEEKKEEPKEESDDDMGFSLFD
Sbjct: 61  NVGCGGGAAAPVAVAAPTASAAAASAIEEKKEEPKEESDDDMGFSLFD 108

[Close]
BLAST of MELO3C018985 vs. ExPASy TrEMBL
Match: A0A5A7TTB2 (60S acidic ribosomal protein P1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G001460 PE=3 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 2.1e-47
Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = 0 

Query: 1   MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL 60
           MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL
Sbjct: 1   MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL 60

Query: 61  NVGCGGGAAAPVAVAAPTASAAAASAIEEKKEEPKEESDDDMGFSLFD 109
           NVGCGGGAAAPVAVAAPTASAA ASAIEEKKEEPKEESDDDMGFSLFD
Sbjct: 61  NVGCGGGAAAPVAVAAPTASAAVASAIEEKKEEPKEESDDDMGFSLFD 108

[Close]
BLAST of MELO3C018985 vs. ExPASy TrEMBL
Match: A0A0A0LTV1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G000010 PE=3 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 5.1e-46
Identity = 105/108 (97.22%), Postives = 106/108 (98.15%), Query Frame = 0 

Query: 1   MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL 60
           MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL
Sbjct: 1   MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL 60

Query: 61  NVGCGGGAAAPVAVAAPTASAAAASAIEEKKEEPKEESDDDMGFSLFD 109
           NVGCGGGAAA VAVAAPTASAAAA AIEEK+EEPKEESDDDMGFSLFD
Sbjct: 61  NVGCGGGAAASVAVAAPTASAAAAPAIEEKREEPKEESDDDMGFSLFD 108

[Close]
BLAST of MELO3C018985 vs. ExPASy TrEMBL
Match: A0A6J1CGB2 (60S acidic ribosomal protein P1-like OS=Momordica charantia OX=3673 GN=LOC111011416 PE=3 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 5.2e-43
Identity = 100/111 (90.09%), Postives = 106/111 (95.50%), Query Frame = 0 

Query: 1   MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL 60
           MSTSELACAYAA+AL+DDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL
Sbjct: 1   MSTSELACAYAAMALYDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL 60

Query: 61  NVGCGGGAAAPVAVAAP---TASAAAASAIEEKKEEPKEESDDDMGFSLFD 109
           NVGCGGGAAAPV+VAAP    A++AAA A+EEKKEEPKEESDDDMGFSLFD
Sbjct: 61  NVGCGGGAAAPVSVAAPAGGAAASAAAPAVEEKKEEPKEESDDDMGFSLFD 111

[Close]
BLAST of MELO3C018985 vs. ExPASy TrEMBL
Match: A0A6J1G2H4 (60S acidic ribosomal protein P1-like OS=Cucurbita moschata OX=3662 GN=LOC111450051 PE=3 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 3.4e-42
Identity = 99/110 (90.00%), Postives = 105/110 (95.45%), Query Frame = 0 

Query: 1   MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL 60
           MSTSELACAYAALALHDDGIAITA+KIAAVVAAAGLCVESYWPSLFAKLAEKR+IGDLLL
Sbjct: 1   MSTSELACAYAALALHDDGIAITADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLL 60

Query: 61  NVGCGGGAAAPVAVAAPT--ASAAAASAIEEKKEEPKEESDDDMGFSLFD 109
           NVGCGGGAAA V+VAAP   A++AAA A+EEKKEEPKEESDDDMGFSLFD
Sbjct: 61  NVGCGGGAAAAVSVAAPAGGAASAAAPAVEEKKEEPKEESDDDMGFSLFD 110

[Close]
BLAST of MELO3C018985 vs. TAIR 10
Match: AT1G01100.1 (60S acidic ribosomal protein family )

HSP 1 Score: 131.7 bits (330), Expect = 3.5e-31
Identity = 73/112 (65.18%), Postives = 89/112 (79.46%), Query Frame = 0 

Query: 1   MST-SELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLL 60
           MST  ELAC+YA + L D+GIAITA+KIA +V AAG+ +ESYWP LFAK+AEKRN+ DL+
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVSIESYWPMLFAKMAEKRNVTDLI 60

Query: 61  LNVGCGGGAAAPVAVAAPTA---SAAAASAIEEKKEEPKEESDDDMGFSLFD 109
           +NVG GGG  APVA AAP A   +AAA +A E+KK+EP EESD D+GF LFD
Sbjct: 61  MNVGAGGGGGAPVAAAAPAAGGGAAAAPAAEEKKKDEPAEESDGDLGFGLFD 112

[Close]
BLAST of MELO3C018985 vs. TAIR 10
Match: AT1G01100.2 (60S acidic ribosomal protein family )

HSP 1 Score: 131.7 bits (330), Expect = 3.5e-31
Identity = 73/112 (65.18%), Postives = 89/112 (79.46%), Query Frame = 0 

Query: 1   MST-SELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLL 60
           MST  ELAC+YA + L D+GIAITA+KIA +V AAG+ +ESYWP LFAK+AEKRN+ DL+
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVSIESYWPMLFAKMAEKRNVTDLI 60

Query: 61  LNVGCGGGAAAPVAVAAPTA---SAAAASAIEEKKEEPKEESDDDMGFSLFD 109
           +NVG GGG  APVA AAP A   +AAA +A E+KK+EP EESD D+GF LFD
Sbjct: 61  MNVGAGGGGGAPVAAAAPAAGGGAAAAPAAEEKKKDEPAEESDGDLGFGLFD 112

[Close]
BLAST of MELO3C018985 vs. TAIR 10
Match: AT1G01100.4 (60S acidic ribosomal protein family )

HSP 1 Score: 131.7 bits (330), Expect = 3.5e-31
Identity = 73/112 (65.18%), Postives = 89/112 (79.46%), Query Frame = 0 

Query: 1   MST-SELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLL 60
           MST  ELAC+YA + L D+GIAITA+KIA +V AAG+ +ESYWP LFAK+AEKRN+ DL+
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVSIESYWPMLFAKMAEKRNVTDLI 60

Query: 61  LNVGCGGGAAAPVAVAAPTA---SAAAASAIEEKKEEPKEESDDDMGFSLFD 109
           +NVG GGG  APVA AAP A   +AAA +A E+KK+EP EESD D+GF LFD
Sbjct: 61  MNVGAGGGGGAPVAAAAPAAGGGAAAAPAAEEKKKDEPAEESDGDLGFGLFD 112

[Close]
BLAST of MELO3C018985 vs. TAIR 10
Match: AT5G47700.1 (60S acidic ribosomal protein family )

HSP 1 Score: 131.3 bits (329), Expect = 4.5e-31
Identity = 73/113 (64.60%), Postives = 89/113 (78.76%), Query Frame = 0 

Query: 1   MST-SELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLL 60
           MST  ELAC+YA + L D+GIAITA+KIA +V AAG+ +ESYWP LFAK+AEKRN+ DL+
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVTIESYWPMLFAKMAEKRNVTDLI 60

Query: 61  LNVGCGGGAAAPVAVAAPT----ASAAAASAIEEKKEEPKEESDDDMGFSLFD 109
           +NVG GGG  APVA AAP     A+AAA +A E+KK+EP EESD D+GF LFD
Sbjct: 61  MNVGAGGGGGAPVAAAAPAAGGGAAAAAPAAEEKKKDEPAEESDGDLGFGLFD 113

[Close]
BLAST of MELO3C018985 vs. TAIR 10
Match: AT5G47700.2 (60S acidic ribosomal protein family )

HSP 1 Score: 131.3 bits (329), Expect = 4.5e-31
Identity = 73/113 (64.60%), Postives = 89/113 (78.76%), Query Frame = 0 

Query: 1   MST-SELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLL 60
           MST  ELAC+YA + L D+GIAITA+KIA +V AAG+ +ESYWP LFAK+AEKRN+ DL+
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVTIESYWPMLFAKMAEKRNVTDLI 60

Query: 61  LNVGCGGGAAAPVAVAAPT----ASAAAASAIEEKKEEPKEESDDDMGFSLFD 109
           +NVG GGG  APVA AAP     A+AAA +A E+KK+EP EESD D+GF LFD
Sbjct: 61  MNVGAGGGGGAPVAAAAPAAGGGAAAAAPAAEEKKKDEPAEESDGDLGFGLFD 113

The following BLAST results are available for this feature:
BLAST of MELO3C018985 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008455614.11.5e-47100.00PREDICTED: 60S acidic ribosomal protein P1-like isoform X1 [Cucumis melo][more]
KAA0045366.14.2e-4799.0760S acidic ribosomal protein P1-like isoform X1 [Cucumis melo var. makuwa][more]
XP_038905168.18.0e-4696.3060S acidic ribosomal protein P1-like [Benincasa hispida][more]
XP_004138012.21.0e-4597.2260S acidic ribosomal protein P1 [Cucumis sativus] >KGN63426.1 hypothetical prote... [more]
XP_038905286.11.5e-4494.4460S acidic ribosomal protein P1-like [Benincasa hispida][more]
BLAST of MELO3C018985 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P528552.8e-3374.5560S acidic ribosomal protein P1 OS=Zea mays OX=4577 GN=RPP1A PE=1 SV=1[more]
Q8LCW94.9e-3065.1860S acidic ribosomal protein P1-1 OS=Arabidopsis thaliana OX=3702 GN=RPP1A PE=3 ... [more]
Q8LEQ06.4e-3064.6060S acidic ribosomal protein P1-3 OS=Arabidopsis thaliana OX=3702 GN=RPP1C PE=1 ... [more]
O230952.1e-2864.6060S acidic ribosomal protein P1-2 OS=Arabidopsis thaliana OX=3702 GN=RPP1B PE=1 ... [more]
P297631.4e-2461.4760S acidic ribosomal protein P1 OS=Chlamydomonas reinhardtii OX=3055 PE=3 SV=1[more]
BLAST of MELO3C018985 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3C0X17.1e-48100.0060S acidic ribosomal protein P1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A5A7TTB22.1e-4799.0760S acidic ribosomal protein P1-like isoform X1 OS=Cucumis melo var. makuwa OX=1... [more]
A0A0A0LTV15.1e-4697.22Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G000010 PE=3 SV=1[more]
A0A6J1CGB25.2e-4390.0960S acidic ribosomal protein P1-like OS=Momordica charantia OX=3673 GN=LOC111011... [more]
A0A6J1G2H43.4e-4290.0060S acidic ribosomal protein P1-like OS=Cucurbita moschata OX=3662 GN=LOC1114500... [more]
BLAST of MELO3C018985 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G01100.13.5e-3165.1860S acidic ribosomal protein family [more]
AT1G01100.23.5e-3165.1860S acidic ribosomal protein family [more]
AT1G01100.43.5e-3165.1860S acidic ribosomal protein family [more]
AT5G47700.14.5e-3164.6060S acidic ribosomal protein family [more]
AT5G47700.24.5e-3164.6060S acidic ribosomal protein family [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF00428Ribosomal_60scoord: 22..107
e-value: 2.3E-24
score: 85.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..102
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 85..108
NoneNo IPR availablePANTHERPTHR4569660S ACIDIC RIBOSOMAL PROTEIN P1coord: 1..108
NoneNo IPR availablePANTHERPTHR45696:SF2060S ACIDIC RIBOSOMAL PROTEIN P1coord: 1..108
NoneNo IPR availableCDDcd05831Ribosomal_P1coord: 16..107
e-value: 1.92615E-18
score: 71.9691
IPR038716Ribosomal protein P1/P2, N-terminal domainGENE3D1.10.10.1410coord: 1..63
e-value: 7.0E-30
score: 104.7
IPR027534Ribosomal protein L12/P1/P2 familyHAMAPMF_01478Ribosomal_L12_archcoord: 6..108
score: 14.019437

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C018985.1MELO3C018985.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006414 translational elongation
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome