Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACTTCCTTATATTCTCATCTCTATCTAACAAAAACCCCTAAAAATGGCTGCCATCAAATCCCTACTTTTCATATCTCTTCTCGCCCTTCTCTTCTTCTCCGAATCCCTATCCACTTCTGCCGCCGATTGCCGCGGCGCTTCCAATTCTGTTACAGGAATGCTCCGCCGTAACGTCCTTCAGACGGCGACTCATGAAATTGCAGATTCGGAAGGGAAGATGAATGTTCATATCAAAAGAGGTGGGGGGGGGCGGATTCGACCTGTAGCGGCTGGCACTGGATTAACTGGCAACCGTAAATCAGCGGCGAGTCGGAGCCAAGTCGCTTCTTTTGGCCTTGGATTTCTCCTCTTCTTCTCACGATTGTTCTTGTAAATTCTGATTGATTTATTGGTTTCTATAAAAAACTGAGATTTGTTTCGGATTTTATTAATTCATTCCGTTCTTTTTTGTTTGATGATAAAAGAATGATATGTTTGTGTCACTGTGTTATGTGTTTATGTCACATCTAGCCAAATGAGCTAAAGGCGACGAGATTGCATTTCCGACTATTGTACTCGATTGTATCGTATACTTATGTCAGGTTATATTGTTTAGTTGTTATTATATAAATGATACATTTAATTTTAAATTTGATTGTTTATTT
mRNA sequence
ACTTCCTTATATTCTCATCTCTATCTAACAAAAACCCCTAAAAATGGCTGCCATCAAATCCCTACTTTTCATATCTCTTCTCGCCCTTCTCTTCTTCTCCGAATCCCTATCCACTTCTGCCGCCGATTGCCGCGGCGCTTCCAATTCTGTTACAGGAATGCTCCGCCGTAACGTCCTTCAGACGGCGACTCATGAAATTGCAGATTCGGAAGGGAAGATGAATGTTCATATCAAAAGAGGTGGGGGGGGGCGGATTCGACCTGTAGCGGCTGGCACTGGATTAACTGGCAACCGTAAATCAGCGGCGAGTCGGAGCCAAGTCGCTTCTTTTGGCCTTGGATTTCTCCTCTTCTTCTCACGATTGTTCTTGTAAATTCTGATTGATTTATTGGTTTCTATAAAAAACTGAGATTTGTTTCGGATTTTATTAATTCATTCCGTTCTTTTTTGTTTGATGATAAAAGAATGATATGTTTGTGTCACTGTGTTATGTGTTTATGTCACATCTAGCCAAATGAGCTAAAGGCGACGAGATTGCATTTCCGACTATTGTACTCGATTGTATCGTATACTTATGTCAGGTTATATTGTTTAGTTGTTATTATATAAATGATACATTTAATTTTAAATTTGATTGTTTATTT
Coding sequence (CDS)
ATGGCTGCCATCAAATCCCTACTTTTCATATCTCTTCTCGCCCTTCTCTTCTTCTCCGAATCCCTATCCACTTCTGCCGCCGATTGCCGCGGCGCTTCCAATTCTGTTACAGGAATGCTCCGCCGTAACGTCCTTCAGACGGCGACTCATGAAATTGCAGATTCGGAAGGGAAGATGAATGTTCATATCAAAAGAGGTGGGGGGGGGCGGATTCGACCTGTAGCGGCTGGCACTGGATTAACTGGCAACCGTAAATCAGCGGCGAGTCGGAGCCAAGTCGCTTCTTTTGGCCTTGGATTTCTCCTCTTCTTCTCACGATTGTTCTTGTAA
Protein sequence
MAAIKSLLFISLLALLFFSESLSTSAADCRGASNSVTGMLRRNVLQTATHEIADSEGKMNVHIKRGGGGRIRPVAAGTGLTGNRKSAASRSQVASFGLGFLLFFSRLFL
Homology
BLAST of MELO3C016060 vs. NCBI nr
Match:
KAA0068047.1 (protein no-on-transient A-like [Cucumis melo var. makuwa] >TYK18081.1 protein no-on-transient A-like [Cucumis melo var. makuwa])
HSP 1 Score: 197.6 bits (501), Expect = 5.6e-47
Identity = 108/109 (99.08%), Postives = 108/109 (99.08%), Query Frame = 0
Query: 1 MAAIKSLLFISLLALLFFSESLSTSAADCRGASNSVTGMLRRNVLQTATHEIADSEGKMN 60
MAAIKSLLFISLLALLFFSESLSTSAADCRGASNSVTGMLRRNVLQTATHEIADSEGKMN
Sbjct: 1 MAAIKSLLFISLLALLFFSESLSTSAADCRGASNSVTGMLRRNVLQTATHEIADSEGKMN 60
Query: 61 VHIKRGGGGRIRPVAAGTGLTGNRKSAASRSQVASFGLGFLLFFSRLFL 110
VHIKRGGGGRIRPVAAGTG TGNRKSAASRSQVASFGLGFLLFFSRLFL
Sbjct: 61 VHIKRGGGGRIRPVAAGTGFTGNRKSAASRSQVASFGLGFLLFFSRLFL 109
BLAST of MELO3C016060 vs. NCBI nr
Match:
KGN44886.1 (hypothetical protein Csa_015765 [Cucumis sativus])
HSP 1 Score: 155.6 bits (392), Expect = 2.4e-34
Identity = 89/109 (81.65%), Postives = 96/109 (88.07%), Query Frame = 0
Query: 1 MAAIKSLLFISLLALLFFSESLSTSAADCRGASNSVTGMLRRNVLQTATHEIADSEGKMN 60
MAAIKSL+ ISLLALLFFSESLSTSAA+CRGASNSVT MLRRN+LQTATHEIADSEGKMN
Sbjct: 1 MAAIKSLISISLLALLFFSESLSTSAANCRGASNSVTAMLRRNILQTATHEIADSEGKMN 60
Query: 61 VHIKRGGGGRIRPVAAGTGLTGNRKSAASRSQVASFGLGFLLFFSRLFL 110
V IK+GG GR RP+ AGTG TG R SAA+RS+V SFGLGFLLFF L L
Sbjct: 61 VRIKKGGLGRFRPIGAGTG-TGTRSSAANRSRVDSFGLGFLLFFFGLVL 108
BLAST of MELO3C016060 vs. NCBI nr
Match:
KAG6575859.1 (hypothetical protein SDJN03_26498, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014393.1 hypothetical protein SDJN02_24570, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 106.3 bits (264), Expect = 1.7e-19
Identity = 69/115 (60.00%), Postives = 83/115 (72.17%), Query Frame = 0
Query: 1 MAAIKSLLFISLLALLFFSESLSTSAADCRGASNSVTGMLRRNVLQTATHEIADS----- 60
MAA+KSL+ ++LLALL FSESL+ SA D G SNS+TGMLRRNVLQTA H+IAD+
Sbjct: 1 MAALKSLVSVALLALLLFSESLTASAVDRSGDSNSLTGMLRRNVLQTAAHQIADNSVESS 60
Query: 61 -EGKMNVHIKRGGGGRIRPVAAGTGLTGNRKSAASRSQVASFGLGFLLFFSRLFL 110
E KMNVHIKR R+RPVA TG R SAA+RS++AS G+G +L LFL
Sbjct: 61 PERKMNVHIKR----RMRPVA-----TGTRSSAANRSRIASIGVGSVLVVLGLFL 106
BLAST of MELO3C016060 vs. NCBI nr
Match:
XP_008451666.1 (PREDICTED: protein no-on-transient A-like [Cucumis melo])
HSP 1 Score: 84.3 bits (207), Expect = 6.9e-13
Identity = 70/142 (49.30%), Postives = 80/142 (56.34%), Query Frame = 0
Query: 1 MAAIKSLLFISLLALLFFSESLSTSAADCRGA-SNSVTGMLRRNVLQTATHEIA------ 60
MAAIK+ +FISLLALLFF E L RGA SNSVTG+L R +LQTA H+ A
Sbjct: 1 MAAIKTTIFISLLALLFFYEYLYPLPPPVRGAHSNSVTGVLHRKILQTAAHKTAGDNVES 60
Query: 61 DSEGKM-NVHIK----------------------RGGGGRIRP---VAAGTGLTGNRKSA 110
SE KM NVH+K GGGGR R G G TG+ KSA
Sbjct: 61 SSERKMNNVHMKIGTSGGGGGGRGGGGGGGRGGRGGGGGRDRSSKRTNLGGGGTGHHKSA 120
BLAST of MELO3C016060 vs. NCBI nr
Match:
KAG6593163.1 (hypothetical protein SDJN03_12639, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 77.4 bits (189), Expect = 8.4e-11
Identity = 55/102 (53.92%), Postives = 68/102 (66.67%), Query Frame = 0
Query: 1 MAAIKSLLFISLLALLFFSESLSTSAADCRGASNSVTGMLRRNVLQTATHEIADSEGKMN 60
MAAIK+LL I+L+ALL F ESL TSAA RGAS S+ G+LRRN++QT +E K N
Sbjct: 1 MAAIKALLSIALIALLLFFESLPTSAAVHRGASTSLAGILRRNIVQTTADHHQVAEKKFN 60
Query: 61 VHIKRGGGGRIRPVAAGTGLTGNRKSAASRSQVASFGLGFLL 103
VHIKR R+RPV G T SAA+RS+ A G+G +L
Sbjct: 61 VHIKR--RMRMRPVLIGRPKT----SAANRSREAFCGVGSML 96
BLAST of MELO3C016060 vs. ExPASy TrEMBL
Match:
A0A5A7VLE5 (Protein no-on-transient A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00010 PE=4 SV=1)
HSP 1 Score: 197.6 bits (501), Expect = 2.7e-47
Identity = 108/109 (99.08%), Postives = 108/109 (99.08%), Query Frame = 0
Query: 1 MAAIKSLLFISLLALLFFSESLSTSAADCRGASNSVTGMLRRNVLQTATHEIADSEGKMN 60
MAAIKSLLFISLLALLFFSESLSTSAADCRGASNSVTGMLRRNVLQTATHEIADSEGKMN
Sbjct: 1 MAAIKSLLFISLLALLFFSESLSTSAADCRGASNSVTGMLRRNVLQTATHEIADSEGKMN 60
Query: 61 VHIKRGGGGRIRPVAAGTGLTGNRKSAASRSQVASFGLGFLLFFSRLFL 110
VHIKRGGGGRIRPVAAGTG TGNRKSAASRSQVASFGLGFLLFFSRLFL
Sbjct: 61 VHIKRGGGGRIRPVAAGTGFTGNRKSAASRSQVASFGLGFLLFFSRLFL 109
BLAST of MELO3C016060 vs. ExPASy TrEMBL
Match:
A0A0A0KAQ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394060 PE=4 SV=1)
HSP 1 Score: 155.6 bits (392), Expect = 1.2e-34
Identity = 89/109 (81.65%), Postives = 96/109 (88.07%), Query Frame = 0
Query: 1 MAAIKSLLFISLLALLFFSESLSTSAADCRGASNSVTGMLRRNVLQTATHEIADSEGKMN 60
MAAIKSL+ ISLLALLFFSESLSTSAA+CRGASNSVT MLRRN+LQTATHEIADSEGKMN
Sbjct: 1 MAAIKSLISISLLALLFFSESLSTSAANCRGASNSVTAMLRRNILQTATHEIADSEGKMN 60
Query: 61 VHIKRGGGGRIRPVAAGTGLTGNRKSAASRSQVASFGLGFLLFFSRLFL 110
V IK+GG GR RP+ AGTG TG R SAA+RS+V SFGLGFLLFF L L
Sbjct: 61 VRIKKGGLGRFRPIGAGTG-TGTRSSAANRSRVDSFGLGFLLFFFGLVL 108
BLAST of MELO3C016060 vs. ExPASy TrEMBL
Match:
A0A1S3BRF6 (protein no-on-transient A-like OS=Cucumis melo OX=3656 GN=LOC103492900 PE=4 SV=1)
HSP 1 Score: 84.3 bits (207), Expect = 3.3e-13
Identity = 70/142 (49.30%), Postives = 80/142 (56.34%), Query Frame = 0
Query: 1 MAAIKSLLFISLLALLFFSESLSTSAADCRGA-SNSVTGMLRRNVLQTATHEIA------ 60
MAAIK+ +FISLLALLFF E L RGA SNSVTG+L R +LQTA H+ A
Sbjct: 1 MAAIKTTIFISLLALLFFYEYLYPLPPPVRGAHSNSVTGVLHRKILQTAAHKTAGDNVES 60
Query: 61 DSEGKM-NVHIK----------------------RGGGGRIRP---VAAGTGLTGNRKSA 110
SE KM NVH+K GGGGR R G G TG+ KSA
Sbjct: 61 SSERKMNNVHMKIGTSGGGGGGRGGGGGGGRGGRGGGGGRDRSSKRTNLGGGGTGHHKSA 120
BLAST of MELO3C016060 vs. ExPASy TrEMBL
Match:
A0A5A7VN87 (Protein no-on-transient A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00030 PE=4 SV=1)
HSP 1 Score: 59.3 bits (142), Expect = 1.2e-05
Identity = 42/72 (58.33%), Postives = 48/72 (66.67%), Query Frame = 0
Query: 1 MAAIKSLLFISLLALLFFSESLSTSAADCRGA-SNSVTGMLRRNVLQTATHEIA------ 60
MAAIK+ +FISLLALLFF E L RGA SNSVTG+L R +LQTA H+ A
Sbjct: 1 MAAIKTTIFISLLALLFFYEYLYPLPPPVRGAHSNSVTGVLHRKILQTAAHKTAGDNVES 60
Query: 61 DSEGKM-NVHIK 65
SE KM NVH+K
Sbjct: 61 SSERKMNNVHMK 72
BLAST of MELO3C016060 vs. ExPASy TrEMBL
Match:
A0A5D3D3Y6 (E3 ubiquitin-protein ligase MIEL1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001920 PE=4 SV=1)
HSP 1 Score: 54.7 bits (130), Expect = 2.8e-04
Identity = 48/117 (41.03%), Postives = 64/117 (54.70%), Query Frame = 0
Query: 1 MAAIKSLLFISLLALLFFSESLSTSAADCRGASNSVTGMLRRNVLQTATHEIADSEGKMN 60
MAAI+ L+ I+LLALLFFSESL T S+S+TG+ RN+L T H I + + +
Sbjct: 1 MAAIRPLVSIALLALLFFSESLLT--------SHSLTGIPHRNILHTVAHRIVNGSVESS 60
Query: 61 VHIKRG-----GGGRIRPVAAGTGLTGNRKSAASRSQVASFGLGFLL---FFSRLFL 110
K RIRP+ + KSA +RS+VASF +G +L F LFL
Sbjct: 61 YQRKSNKLHTKDRRRIRPILISGSNGMHHKSAENRSRVASFEVGSMLCICIFLGLFL 109
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAA0068047.1 | 5.6e-47 | 99.08 | protein no-on-transient A-like [Cucumis melo var. makuwa] >TYK18081.1 protein no... | [more] |
| KGN44886.1 | 2.4e-34 | 81.65 | hypothetical protein Csa_015765 [Cucumis sativus] | [more] |
| KAG6575859.1 | 1.7e-19 | 60.00 | hypothetical protein SDJN03_26498, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| XP_008451666.1 | 6.9e-13 | 49.30 | PREDICTED: protein no-on-transient A-like [Cucumis melo] | [more] |
| KAG6593163.1 | 8.4e-11 | 53.92 | hypothetical protein SDJN03_12639, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7VLE5 | 2.7e-47 | 99.08 | Protein no-on-transient A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... | [more] |
| A0A0A0KAQ7 | 1.2e-34 | 81.65 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394060 PE=4 SV=1 | [more] |
| A0A1S3BRF6 | 3.3e-13 | 49.30 | protein no-on-transient A-like OS=Cucumis melo OX=3656 GN=LOC103492900 PE=4 SV=1 | [more] |
| A0A5A7VN87 | 1.2e-05 | 58.33 | Protein no-on-transient A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... | [more] |
| A0A5D3D3Y6 | 2.8e-04 | 41.03 | E3 ubiquitin-protein ligase MIEL1-like OS=Cucumis melo var. makuwa OX=1194695 GN... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
