Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGATTGGTTGGAGGCGGAAGAAGGCGTCGTTGGAGGCGAAAGAAGGCGTCGTTGGAGGCGGAAGAAGGCGTCGTGCGGAAGAAGGCGTTCTTAACGTGGAGAATAGTAAGGCGGAAGAAGGGAGAAAATCGTGGAAAATATATTGGAGAGGGAGAAAATCGCGCAGAGAAATGGAGGAGGAGAAATTCGCGTCAGTATTCTTTTTAA
mRNA sequence
ATGACGATTGGTTGGAGGCGGAAGAAGGCGTCGTTGGAGGCGAAAGAAGGCGTCGTTGGAGGCGGAAGAAGGCGTCGTGCGGAAGAAGGCGTTCTTAACGTGGAGAATAGTAAGGCGGAAGAAGGGAGAAAATCGTGGAAAATATATTGGAGAGGGAGAAAATCGCGCAGAGAAATGGAGGAGGAGAAATTCGCGTCAGTATTCTTTTTAA
Coding sequence (CDS)
ATGACGATTGGTTGGAGGCGGAAGAAGGCGTCGTTGGAGGCGAAAGAAGGCGTCGTTGGAGGCGGAAGAAGGCGTCGTGCGGAAGAAGGCGTTCTTAACGTGGAGAATAGTAAGGCGGAAGAAGGGAGAAAATCGTGGAAAATATATTGGAGAGGGAGAAAATCGCGCAGAGAAATGGAGGAGGAGAAATTCGCGTCAGTATTCTTTTTA
Protein sequence
MTIGWRRKKASLEAKEGVVGGGRRRRAEEGVLNVENSKAEEGRKSWKIYWRGRKSRREMEEEKFASVFFL
Homology
BLAST of MELO3C014893 vs. NCBI nr
Match:
KAA0025306.1 (hypothetical protein E6C27_scaffold541G001610 [Cucumis melo var. makuwa])
HSP 1 Score: 115.5 bits (288), Expect = 1.8e-22
Identity = 60/70 (85.71%), Postives = 63/70 (90.00%), Query Frame = 0
Query: 1 MTIGWRRKKASLEAKEGVVGGGRRRRAEEGVLNVENSKAEEGRKSWKIYWRGRKSRREME 60
MT GWR+KKASLEAKEG+VGGGRRRRAEEGVL EN KAEEGRKSW+IYWRGRKSRR ME
Sbjct: 99 MTTGWRQKKASLEAKEGIVGGGRRRRAEEGVL--ENGKAEEGRKSWRIYWRGRKSRRRME 158
Query: 61 EEKFASVFFL 71
EEKFA FFL
Sbjct: 159 EEKFAPGFFL 166
BLAST of MELO3C014893 vs. NCBI nr
Match:
KAA0063229.1 (lon protease 2-like [Cucumis melo var. makuwa] >TYK13479.1 lon protease 2-like [Cucumis melo var. makuwa])
HSP 1 Score: 115.2 bits (287), Expect = 2.3e-22
Identity = 58/66 (87.88%), Postives = 61/66 (92.42%), Query Frame = 0
Query: 5 WRRKKASLEAKEGVVGGGRRRRAEEGVLNVENSKAEEGRKSWKIYWRGRKSRREMEEEKF 64
WRRKK LEA+EGVVGGGRRRRA+EGVLNVEN K EEGRKSW+IYWRGRKSRR MEEEKF
Sbjct: 27 WRRKKTFLEAEEGVVGGGRRRRAKEGVLNVENGKDEEGRKSWRIYWRGRKSRRGMEEEKF 86
Query: 65 ASVFFL 71
ASVFFL
Sbjct: 87 ASVFFL 92
BLAST of MELO3C014893 vs. NCBI nr
Match:
KAA0034559.1 (50S ribosomal protein L15 [Cucumis melo var. makuwa] >TYK09112.1 50S ribosomal protein L15 [Cucumis melo var. makuwa])
HSP 1 Score: 81.6 bits (200), Expect = 2.9e-12
Identity = 55/96 (57.29%), Postives = 57/96 (59.38%), Query Frame = 0
Query: 4 GWRRKKA----------------SLEAKEGVVGG-------------GRRRRAEEGVLNV 63
GWRRKK LEA+EGVVGG GRRRRAEEGVL
Sbjct: 8 GWRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRRNKASCGRRRRAEEGVL-- 67
Query: 64 ENSKAEEGRKSWKIYWRGRKSRREMEEEKFASVFFL 71
EN KAEE RKSW+IYWRGRKSRR MEEEKFA FL
Sbjct: 68 ENGKAEEVRKSWRIYWRGRKSRRRMEEEKFAPGLFL 101
BLAST of MELO3C014893 vs. NCBI nr
Match:
KAA0046136.1 (hypothetical protein E6C27_scaffold157G00760 [Cucumis melo var. makuwa])
HSP 1 Score: 77.0 bits (188), Expect = 7.1e-11
Identity = 42/64 (65.62%), Postives = 45/64 (70.31%), Query Frame = 0
Query: 1 MTIGWRRKKASLEAKEGVVGGGRRRRAEEGVLNVENSKAEEGRKSWKIYWRGRKSRREME 60
MT GWR+KK LE AEEGVLNVEN K E+GRKSW+IYWRGRKSRR ME
Sbjct: 1 MTTGWRQKKLWLE-------------AEEGVLNVENGKDEKGRKSWRIYWRGRKSRRGME 51
Query: 61 EEKF 65
EEKF
Sbjct: 61 EEKF 51
BLAST of MELO3C014893 vs. NCBI nr
Match:
KAA0047052.1 (hypothetical protein E6C27_scaffold466G00040 [Cucumis melo var. makuwa])
HSP 1 Score: 56.6 bits (135), Expect = 9.9e-05
Identity = 28/32 (87.50%), Postives = 29/32 (90.62%), Query Frame = 0
Query: 1 MTIGWRRKKASLEAKEGVVGGGRRRRAEEGVL 33
MT GWRRKKASLEA EGVVGGG RRRAEEGV+
Sbjct: 22 MTTGWRRKKASLEANEGVVGGGTRRRAEEGVV 53
BLAST of MELO3C014893 vs. ExPASy TrEMBL
Match:
A0A5A7SHI4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold541G001610 PE=4 SV=1)
HSP 1 Score: 115.5 bits (288), Expect = 8.7e-23
Identity = 60/70 (85.71%), Postives = 63/70 (90.00%), Query Frame = 0
Query: 1 MTIGWRRKKASLEAKEGVVGGGRRRRAEEGVLNVENSKAEEGRKSWKIYWRGRKSRREME 60
MT GWR+KKASLEAKEG+VGGGRRRRAEEGVL EN KAEEGRKSW+IYWRGRKSRR ME
Sbjct: 99 MTTGWRQKKASLEAKEGIVGGGRRRRAEEGVL--ENGKAEEGRKSWRIYWRGRKSRRRME 158
Query: 61 EEKFASVFFL 71
EEKFA FFL
Sbjct: 159 EEKFAPGFFL 166
BLAST of MELO3C014893 vs. ExPASy TrEMBL
Match:
A0A5D3CTI7 (Lon protease 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold556G00120 PE=4 SV=1)
HSP 1 Score: 115.2 bits (287), Expect = 1.1e-22
Identity = 58/66 (87.88%), Postives = 61/66 (92.42%), Query Frame = 0
Query: 5 WRRKKASLEAKEGVVGGGRRRRAEEGVLNVENSKAEEGRKSWKIYWRGRKSRREMEEEKF 64
WRRKK LEA+EGVVGGGRRRRA+EGVLNVEN K EEGRKSW+IYWRGRKSRR MEEEKF
Sbjct: 27 WRRKKTFLEAEEGVVGGGRRRRAKEGVLNVENGKDEEGRKSWRIYWRGRKSRRGMEEEKF 86
Query: 65 ASVFFL 71
ASVFFL
Sbjct: 87 ASVFFL 92
BLAST of MELO3C014893 vs. ExPASy TrEMBL
Match:
A0A5D3CCS9 (50S ribosomal protein L15 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001030 PE=3 SV=1)
HSP 1 Score: 81.6 bits (200), Expect = 1.4e-12
Identity = 55/96 (57.29%), Postives = 57/96 (59.38%), Query Frame = 0
Query: 4 GWRRKKA----------------SLEAKEGVVGG-------------GRRRRAEEGVLNV 63
GWRRKK LEA+EGVVGG GRRRRAEEGVL
Sbjct: 8 GWRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRRNKASCGRRRRAEEGVL-- 67
Query: 64 ENSKAEEGRKSWKIYWRGRKSRREMEEEKFASVFFL 71
EN KAEE RKSW+IYWRGRKSRR MEEEKFA FL
Sbjct: 68 ENGKAEEVRKSWRIYWRGRKSRRRMEEEKFAPGLFL 101
BLAST of MELO3C014893 vs. ExPASy TrEMBL
Match:
A0A5A7TVG1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold157G00760 PE=4 SV=1)
HSP 1 Score: 77.0 bits (188), Expect = 3.4e-11
Identity = 42/64 (65.62%), Postives = 45/64 (70.31%), Query Frame = 0
Query: 1 MTIGWRRKKASLEAKEGVVGGGRRRRAEEGVLNVENSKAEEGRKSWKIYWRGRKSRREME 60
MT GWR+KK LE AEEGVLNVEN K E+GRKSW+IYWRGRKSRR ME
Sbjct: 1 MTTGWRQKKLWLE-------------AEEGVLNVENGKDEKGRKSWRIYWRGRKSRRGME 51
Query: 61 EEKF 65
EEKF
Sbjct: 61 EEKF 51
BLAST of MELO3C014893 vs. ExPASy TrEMBL
Match:
A0A5A7TUB6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold466G00040 PE=4 SV=1)
HSP 1 Score: 56.6 bits (135), Expect = 4.8e-05
Identity = 28/32 (87.50%), Postives = 29/32 (90.62%), Query Frame = 0
Query: 1 MTIGWRRKKASLEAKEGVVGGGRRRRAEEGVL 33
MT GWRRKKASLEA EGVVGGG RRRAEEGV+
Sbjct: 22 MTTGWRRKKASLEANEGVVGGGTRRRAEEGVV 53
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0025306.1 | 1.8e-22 | 85.71 | hypothetical protein E6C27_scaffold541G001610 [Cucumis melo var. makuwa] | [more] |
KAA0063229.1 | 2.3e-22 | 87.88 | lon protease 2-like [Cucumis melo var. makuwa] >TYK13479.1 lon protease 2-like [... | [more] |
KAA0034559.1 | 2.9e-12 | 57.29 | 50S ribosomal protein L15 [Cucumis melo var. makuwa] >TYK09112.1 50S ribosomal p... | [more] |
KAA0046136.1 | 7.1e-11 | 65.63 | hypothetical protein E6C27_scaffold157G00760 [Cucumis melo var. makuwa] | [more] |
KAA0047052.1 | 9.9e-05 | 87.50 | hypothetical protein E6C27_scaffold466G00040 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7SHI4 | 8.7e-23 | 85.71 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5D3CTI7 | 1.1e-22 | 87.88 | Lon protease 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold556G... | [more] |
A0A5D3CCS9 | 1.4e-12 | 57.29 | 50S ribosomal protein L15 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... | [more] |
A0A5A7TVG1 | 3.4e-11 | 65.63 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5A7TUB6 | 4.8e-05 | 87.50 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
Match Name | E-value | Identity | Description | |