MELO3C014893 (gene) Melon (DHL92) v4

Overview
NameMELO3C014893
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionLon protease 2-like
Locationchr06: 20885353 .. 20885563 (-)
RNA-Seq ExpressionMELO3C014893
SyntenyMELO3C014893
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGATTGGTTGGAGGCGGAAGAAGGCGTCGTTGGAGGCGAAAGAAGGCGTCGTTGGAGGCGGAAGAAGGCGTCGTGCGGAAGAAGGCGTTCTTAACGTGGAGAATAGTAAGGCGGAAGAAGGGAGAAAATCGTGGAAAATATATTGGAGAGGGAGAAAATCGCGCAGAGAAATGGAGGAGGAGAAATTCGCGTCAGTATTCTTTTTAA

mRNA sequence

ATGACGATTGGTTGGAGGCGGAAGAAGGCGTCGTTGGAGGCGAAAGAAGGCGTCGTTGGAGGCGGAAGAAGGCGTCGTGCGGAAGAAGGCGTTCTTAACGTGGAGAATAGTAAGGCGGAAGAAGGGAGAAAATCGTGGAAAATATATTGGAGAGGGAGAAAATCGCGCAGAGAAATGGAGGAGGAGAAATTCGCGTCAGTATTCTTTTTAA

Coding sequence (CDS)

ATGACGATTGGTTGGAGGCGGAAGAAGGCGTCGTTGGAGGCGAAAGAAGGCGTCGTTGGAGGCGGAAGAAGGCGTCGTGCGGAAGAAGGCGTTCTTAACGTGGAGAATAGTAAGGCGGAAGAAGGGAGAAAATCGTGGAAAATATATTGGAGAGGGAGAAAATCGCGCAGAGAAATGGAGGAGGAGAAATTCGCGTCAGTATTCTTTTTA

Protein sequence

MTIGWRRKKASLEAKEGVVGGGRRRRAEEGVLNVENSKAEEGRKSWKIYWRGRKSRREMEEEKFASVFFL
Homology
BLAST of MELO3C014893 vs. NCBI nr
Match: KAA0025306.1 (hypothetical protein E6C27_scaffold541G001610 [Cucumis melo var. makuwa])

HSP 1 Score: 115.5 bits (288), Expect = 1.8e-22
Identity = 60/70 (85.71%), Postives = 63/70 (90.00%), Query Frame = 0

Query: 1   MTIGWRRKKASLEAKEGVVGGGRRRRAEEGVLNVENSKAEEGRKSWKIYWRGRKSRREME 60
           MT GWR+KKASLEAKEG+VGGGRRRRAEEGVL  EN KAEEGRKSW+IYWRGRKSRR ME
Sbjct: 99  MTTGWRQKKASLEAKEGIVGGGRRRRAEEGVL--ENGKAEEGRKSWRIYWRGRKSRRRME 158

Query: 61  EEKFASVFFL 71
           EEKFA  FFL
Sbjct: 159 EEKFAPGFFL 166

BLAST of MELO3C014893 vs. NCBI nr
Match: KAA0063229.1 (lon protease 2-like [Cucumis melo var. makuwa] >TYK13479.1 lon protease 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 115.2 bits (287), Expect = 2.3e-22
Identity = 58/66 (87.88%), Postives = 61/66 (92.42%), Query Frame = 0

Query: 5  WRRKKASLEAKEGVVGGGRRRRAEEGVLNVENSKAEEGRKSWKIYWRGRKSRREMEEEKF 64
          WRRKK  LEA+EGVVGGGRRRRA+EGVLNVEN K EEGRKSW+IYWRGRKSRR MEEEKF
Sbjct: 27 WRRKKTFLEAEEGVVGGGRRRRAKEGVLNVENGKDEEGRKSWRIYWRGRKSRRGMEEEKF 86

Query: 65 ASVFFL 71
          ASVFFL
Sbjct: 87 ASVFFL 92

BLAST of MELO3C014893 vs. NCBI nr
Match: KAA0034559.1 (50S ribosomal protein L15 [Cucumis melo var. makuwa] >TYK09112.1 50S ribosomal protein L15 [Cucumis melo var. makuwa])

HSP 1 Score: 81.6 bits (200), Expect = 2.9e-12
Identity = 55/96 (57.29%), Postives = 57/96 (59.38%), Query Frame = 0

Query: 4   GWRRKKA----------------SLEAKEGVVGG-------------GRRRRAEEGVLNV 63
           GWRRKK                  LEA+EGVVGG             GRRRRAEEGVL  
Sbjct: 8   GWRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRRNKASCGRRRRAEEGVL-- 67

Query: 64  ENSKAEEGRKSWKIYWRGRKSRREMEEEKFASVFFL 71
           EN KAEE RKSW+IYWRGRKSRR MEEEKFA   FL
Sbjct: 68  ENGKAEEVRKSWRIYWRGRKSRRRMEEEKFAPGLFL 101

BLAST of MELO3C014893 vs. NCBI nr
Match: KAA0046136.1 (hypothetical protein E6C27_scaffold157G00760 [Cucumis melo var. makuwa])

HSP 1 Score: 77.0 bits (188), Expect = 7.1e-11
Identity = 42/64 (65.62%), Postives = 45/64 (70.31%), Query Frame = 0

Query: 1  MTIGWRRKKASLEAKEGVVGGGRRRRAEEGVLNVENSKAEEGRKSWKIYWRGRKSRREME 60
          MT GWR+KK  LE             AEEGVLNVEN K E+GRKSW+IYWRGRKSRR ME
Sbjct: 1  MTTGWRQKKLWLE-------------AEEGVLNVENGKDEKGRKSWRIYWRGRKSRRGME 51

Query: 61 EEKF 65
          EEKF
Sbjct: 61 EEKF 51

BLAST of MELO3C014893 vs. NCBI nr
Match: KAA0047052.1 (hypothetical protein E6C27_scaffold466G00040 [Cucumis melo var. makuwa])

HSP 1 Score: 56.6 bits (135), Expect = 9.9e-05
Identity = 28/32 (87.50%), Postives = 29/32 (90.62%), Query Frame = 0

Query: 1  MTIGWRRKKASLEAKEGVVGGGRRRRAEEGVL 33
          MT GWRRKKASLEA EGVVGGG RRRAEEGV+
Sbjct: 22 MTTGWRRKKASLEANEGVVGGGTRRRAEEGVV 53

BLAST of MELO3C014893 vs. ExPASy TrEMBL
Match: A0A5A7SHI4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold541G001610 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 8.7e-23
Identity = 60/70 (85.71%), Postives = 63/70 (90.00%), Query Frame = 0

Query: 1   MTIGWRRKKASLEAKEGVVGGGRRRRAEEGVLNVENSKAEEGRKSWKIYWRGRKSRREME 60
           MT GWR+KKASLEAKEG+VGGGRRRRAEEGVL  EN KAEEGRKSW+IYWRGRKSRR ME
Sbjct: 99  MTTGWRQKKASLEAKEGIVGGGRRRRAEEGVL--ENGKAEEGRKSWRIYWRGRKSRRRME 158

Query: 61  EEKFASVFFL 71
           EEKFA  FFL
Sbjct: 159 EEKFAPGFFL 166

BLAST of MELO3C014893 vs. ExPASy TrEMBL
Match: A0A5D3CTI7 (Lon protease 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold556G00120 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.1e-22
Identity = 58/66 (87.88%), Postives = 61/66 (92.42%), Query Frame = 0

Query: 5  WRRKKASLEAKEGVVGGGRRRRAEEGVLNVENSKAEEGRKSWKIYWRGRKSRREMEEEKF 64
          WRRKK  LEA+EGVVGGGRRRRA+EGVLNVEN K EEGRKSW+IYWRGRKSRR MEEEKF
Sbjct: 27 WRRKKTFLEAEEGVVGGGRRRRAKEGVLNVENGKDEEGRKSWRIYWRGRKSRRGMEEEKF 86

Query: 65 ASVFFL 71
          ASVFFL
Sbjct: 87 ASVFFL 92

BLAST of MELO3C014893 vs. ExPASy TrEMBL
Match: A0A5D3CCS9 (50S ribosomal protein L15 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001030 PE=3 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.4e-12
Identity = 55/96 (57.29%), Postives = 57/96 (59.38%), Query Frame = 0

Query: 4   GWRRKKA----------------SLEAKEGVVGG-------------GRRRRAEEGVLNV 63
           GWRRKK                  LEA+EGVVGG             GRRRRAEEGVL  
Sbjct: 8   GWRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRRNKASCGRRRRAEEGVL-- 67

Query: 64  ENSKAEEGRKSWKIYWRGRKSRREMEEEKFASVFFL 71
           EN KAEE RKSW+IYWRGRKSRR MEEEKFA   FL
Sbjct: 68  ENGKAEEVRKSWRIYWRGRKSRRRMEEEKFAPGLFL 101

BLAST of MELO3C014893 vs. ExPASy TrEMBL
Match: A0A5A7TVG1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold157G00760 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 3.4e-11
Identity = 42/64 (65.62%), Postives = 45/64 (70.31%), Query Frame = 0

Query: 1  MTIGWRRKKASLEAKEGVVGGGRRRRAEEGVLNVENSKAEEGRKSWKIYWRGRKSRREME 60
          MT GWR+KK  LE             AEEGVLNVEN K E+GRKSW+IYWRGRKSRR ME
Sbjct: 1  MTTGWRQKKLWLE-------------AEEGVLNVENGKDEKGRKSWRIYWRGRKSRRGME 51

Query: 61 EEKF 65
          EEKF
Sbjct: 61 EEKF 51

BLAST of MELO3C014893 vs. ExPASy TrEMBL
Match: A0A5A7TUB6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold466G00040 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 4.8e-05
Identity = 28/32 (87.50%), Postives = 29/32 (90.62%), Query Frame = 0

Query: 1  MTIGWRRKKASLEAKEGVVGGGRRRRAEEGVL 33
          MT GWRRKKASLEA EGVVGGG RRRAEEGV+
Sbjct: 22 MTTGWRRKKASLEANEGVVGGGTRRRAEEGVV 53

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0025306.11.8e-2285.71hypothetical protein E6C27_scaffold541G001610 [Cucumis melo var. makuwa][more]
KAA0063229.12.3e-2287.88lon protease 2-like [Cucumis melo var. makuwa] >TYK13479.1 lon protease 2-like [... [more]
KAA0034559.12.9e-1257.2950S ribosomal protein L15 [Cucumis melo var. makuwa] >TYK09112.1 50S ribosomal p... [more]
KAA0046136.17.1e-1165.63hypothetical protein E6C27_scaffold157G00760 [Cucumis melo var. makuwa][more]
KAA0047052.19.9e-0587.50hypothetical protein E6C27_scaffold466G00040 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7SHI48.7e-2385.71Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3CTI71.1e-2287.88Lon protease 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold556G... [more]
A0A5D3CCS91.4e-1257.2950S ribosomal protein L15 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
A0A5A7TVG13.4e-1165.63Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7TUB64.8e-0587.50Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C014893.1MELO3C014893.1mRNA