Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAGTTCAATGGGAGAAGATAATAGAAGGCGATTTTGAAGCCCTAATAAATACGCCCAGTTCCTCATCATGTCCATTAACCAAAACCACCTCCTCCGCCTTGTTCTTTCCTGCCGGAAAATCACCGCCCAGGTCACCAATCCAGCCACCTCCTCCATCATCGCCATGGCTTCTTCCTCCGAGCAGGAATTCGTCGCCTATTACCGCTCCAAACTCCACCGCTTTCCTCGATCCAACAATTTCTGGGATTCCAAAGTCGCCTCTCGCGTCGGCATAAAGCTTGGCCACCGTTTGAAGGAGATCGGCGTCTCCGATGTTCGGATTGATCTCGCTGAAGAACTCTCCCGCCCTATTTACTACCGGAAGATGGTTCTGCCGCTCTTCGATTCTGTTCAGCGCTCCGGCATCGCCGTTGATGGGGTTGAGAAGCTTGGAAAAGGTTCGATCTAGCCTCGACTCTTATTTTTTCCGATCGGAGCTTGTACGTTTCGCGATTGAGATTGAATTTAGGGCACATATAATTGCTTATCCTCCATGTCGATTTATCATACCAATTTTGACTCATTTTCGATCTTTCTTTTGGATTCAAATTGTAATAATATAAATTGTTTTCATAATTAGTGAAAGAAATAGAGAAGAGACCAATTTCCCCTTTGGAATTTTGGCCATTTTGTCCTTGGCAGTGTTGAACTGCCTACAGATTATACTTGGCTGAAAAAAAAGGTAGCTATTGTAATTAGACAATATTTTTTTAAATAACTCCTAACGTCGATGAATGTATCAAAACAAAACATTGAAGTTTAATTTGATTCAATTATTAATTTGGG
mRNA sequence
AAAGTTCAATGGGAGAAGATAATAGAAGGCGATTTTGAAGCCCTAATAAATACGCCCAGTTCCTCATCATGTCCATTAACCAAAACCACCTCCTCCGCCTTGTTCTTTCCTGCCGGAAAATCACCGCCCAGGTCACCAATCCAGCCACCTCCTCCATCATCGCCATGGCTTCTTCCTCCGAGCAGGAATTCGTCGCCTATTACCGCTCCAAACTCCACCGCTTTCCTCGATCCAACAATTTCTGGGATTCCAAAGTCGCCTCTCGCGTCGGCATAAAGCTTGGCCACCGTTTGAAGGAGATCGGCGTCTCCGATGTTCGGATTGATCTCGCTGAAGAACTCTCCCGCCCTATTTACTACCGGAAGATGGTTCTGCCGCTCTTCGATTCTGTTCAGCGCTCCGGCATCGCCGTTGATGGGGTTGAGAAGCTTGGAAAAGGTTCGATCTAGCCTCGACTCTTATTTTTTCCGATCGGAGCTTGTACGTTTCGCGATTGAGATTGAATTTAGGGCACATATAATTGCTTATCCTCCATGTCGATTTATCATACCAATTTTGACTCATTTTCGATCTTTCTTTTGGATTCAAATTGTAATAATATAAATTGTTTTCATAATTAGTGAAAGAAATAGAGAAGAGACCAATTTCCCCTTTGGAATTTTGGCCATTTTGTCCTTGGCAGTGTTGAACTGCCTACAGATTATACTTGGCTGAAAAAAAAGGTAGCTATTGTAATTAGACAATATTTTTTTAAATAACTCCTAACGTCGATGAATGTATCAAAACAAAACATTGAAGTTTAATTTGATTCAATTATTAATTTGGG
Coding sequence (CDS)
ATGTCCATTAACCAAAACCACCTCCTCCGCCTTGTTCTTTCCTGCCGGAAAATCACCGCCCAGGTCACCAATCCAGCCACCTCCTCCATCATCGCCATGGCTTCTTCCTCCGAGCAGGAATTCGTCGCCTATTACCGCTCCAAACTCCACCGCTTTCCTCGATCCAACAATTTCTGGGATTCCAAAGTCGCCTCTCGCGTCGGCATAAAGCTTGGCCACCGTTTGAAGGAGATCGGCGTCTCCGATGTTCGGATTGATCTCGCTGAAGAACTCTCCCGCCCTATTTACTACCGGAAGATGGTTCTGCCGCTCTTCGATTCTGTTCAGCGCTCCGGCATCGCCGTTGATGGGGTTGAGAAGCTTGGAAAAGGTTCGATCTAG
Protein sequence
MSINQNHLLRLVLSCRKITAQVTNPATSSIIAMASSSEQEFVAYYRSKLHRFPRSNNFWDSKVASRVGIKLGHRLKEIGVSDVRIDLAEELSRPIYYRKMVLPLFDSVQRSGIAVDGVEKLGKGSI
Homology
BLAST of MELO3C011656 vs. NCBI nr
Match:
XP_016900104.1 (PREDICTED: uncharacterized protein LOC103488672 [Cucumis melo] >KAA0033043.1 hypothetical protein E6C27_scaffold269G001480 [Cucumis melo var. makuwa] >TYK03458.1 hypothetical protein E5676_scaffold121G00630 [Cucumis melo var. makuwa])
HSP 1 Score: 245.7 bits (626), Expect = 2.1e-61
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0
Query: 1 MSINQNHLLRLVLSCRKITAQVTNPATSSIIAMASSSEQEFVAYYRSKLHRFPRSNNFWD 60
MSINQNHLLRLVLSCRKITAQVTNPATSSIIAMASSSEQEFVAYYRSKLHRFPRSNNFWD
Sbjct: 1 MSINQNHLLRLVLSCRKITAQVTNPATSSIIAMASSSEQEFVAYYRSKLHRFPRSNNFWD 60
Query: 61 SKVASRVGIKLGHRLKEIGVSDVRIDLAEELSRPIYYRKMVLPLFDSVQRSGIAVDGVEK 120
SKVASRVGIKLGHRLKEIGVSDVRIDLAEELSRPIYYRKMVLPLFDSVQRSGIAVDGVEK
Sbjct: 61 SKVASRVGIKLGHRLKEIGVSDVRIDLAEELSRPIYYRKMVLPLFDSVQRSGIAVDGVEK 120
Query: 121 LGKGSI 127
LGKGSI
Sbjct: 121 LGKGSI 126
BLAST of MELO3C011656 vs. NCBI nr
Match:
XP_004140885.1 (uncharacterized protein LOC101204363 [Cucumis sativus])
HSP 1 Score: 238.8 bits (608), Expect = 2.5e-59
Identity = 122/126 (96.83%), Postives = 123/126 (97.62%), Query Frame = 0
Query: 1 MSINQNHLLRLVLSCRKITAQVTNPATSSIIAMASSSEQEFVAYYRSKLHRFPRSNNFWD 60
MSINQNHLLRLVLSCRKITAQVTNPATSSIIAMASSSEQEFVAYYRSKLHRFPRSNNFWD
Sbjct: 1 MSINQNHLLRLVLSCRKITAQVTNPATSSIIAMASSSEQEFVAYYRSKLHRFPRSNNFWD 60
Query: 61 SKVASRVGIKLGHRLKEIGVSDVRIDLAEELSRPIYYRKMVLPLFDSVQRSGIAVDGVEK 120
SKVASRVG KLGHRLKEIGVSDVRIDLAEELSRPIYYRKMVLPLFDSVQRSG+AVDG EK
Sbjct: 61 SKVASRVGEKLGHRLKEIGVSDVRIDLAEELSRPIYYRKMVLPLFDSVQRSGVAVDGAEK 120
Query: 121 LGKGSI 127
LG GSI
Sbjct: 121 LGTGSI 126
BLAST of MELO3C011656 vs. NCBI nr
Match:
KAE8646622.1 (hypothetical protein Csa_005380 [Cucumis sativus])
HSP 1 Score: 233.8 bits (595), Expect = 8.1e-58
Identity = 119/122 (97.54%), Postives = 120/122 (98.36%), Query Frame = 0
Query: 1 MSINQNHLLRLVLSCRKITAQVTNPATSSIIAMASSSEQEFVAYYRSKLHRFPRSNNFWD 60
MSINQNHLLRLVLSCRKITAQVTNPATSSIIAMASSSEQEFVAYYRSKLHRFPRSNNFWD
Sbjct: 1 MSINQNHLLRLVLSCRKITAQVTNPATSSIIAMASSSEQEFVAYYRSKLHRFPRSNNFWD 60
Query: 61 SKVASRVGIKLGHRLKEIGVSDVRIDLAEELSRPIYYRKMVLPLFDSVQRSGIAVDGVEK 120
SKVASRVG KLGHRLKEIGVSDVRIDLAEELSRPIYYRKMVLPLFDSVQRSG+AVDG EK
Sbjct: 61 SKVASRVGEKLGHRLKEIGVSDVRIDLAEELSRPIYYRKMVLPLFDSVQRSGVAVDGAEK 120
Query: 121 LG 123
LG
Sbjct: 121 LG 122
BLAST of MELO3C011656 vs. NCBI nr
Match:
XP_038884098.1 (uncharacterized protein LOC120075027 isoform X5 [Benincasa hispida])
HSP 1 Score: 231.5 bits (589), Expect = 4.0e-57
Identity = 116/125 (92.80%), Postives = 121/125 (96.80%), Query Frame = 0
Query: 1 MSINQNHLLRLVLSCRKITAQVTNPATSSIIAMASSSEQEFVAYYRSKLHRFPRSNNFWD 60
MSI+QNHLLRLVLSCRKITAQVTNPATSSI+AMASSSEQEFVAYYRSKLHRFPRSNNFWD
Sbjct: 1 MSISQNHLLRLVLSCRKITAQVTNPATSSIVAMASSSEQEFVAYYRSKLHRFPRSNNFWD 60
Query: 61 SKVASRVGIKLGHRLKEIGVSDVRIDLAEELSRPIYYRKMVLPLFDSVQRSGIAVDGVEK 120
SKVASRVG KLGHRLKEIGVSDVRIDLAEE SRP+YYRKMVLPLFDSVQRSG+AVDG EK
Sbjct: 61 SKVASRVGEKLGHRLKEIGVSDVRIDLAEEFSRPLYYRKMVLPLFDSVQRSGVAVDGAEK 120
Query: 121 LGKGS 126
LG G+
Sbjct: 121 LGTGN 125
BLAST of MELO3C011656 vs. NCBI nr
Match:
XP_038884099.1 (uncharacterized protein LOC120075027 isoform X6 [Benincasa hispida])
HSP 1 Score: 231.5 bits (589), Expect = 4.0e-57
Identity = 116/125 (92.80%), Postives = 121/125 (96.80%), Query Frame = 0
Query: 1 MSINQNHLLRLVLSCRKITAQVTNPATSSIIAMASSSEQEFVAYYRSKLHRFPRSNNFWD 60
MSI+QNHLLRLVLSCRKITAQVTNPATSSI+AMASSSEQEFVAYYRSKLHRFPRSNNFWD
Sbjct: 1 MSISQNHLLRLVLSCRKITAQVTNPATSSIVAMASSSEQEFVAYYRSKLHRFPRSNNFWD 60
Query: 61 SKVASRVGIKLGHRLKEIGVSDVRIDLAEELSRPIYYRKMVLPLFDSVQRSGIAVDGVEK 120
SKVASRVG KLGHRLKEIGVSDVRIDLAEE SRP+YYRKMVLPLFDSVQRSG+AVDG EK
Sbjct: 61 SKVASRVGEKLGHRLKEIGVSDVRIDLAEEFSRPLYYRKMVLPLFDSVQRSGVAVDGAEK 120
Query: 121 LGKGS 126
LG G+
Sbjct: 121 LGTGN 125
BLAST of MELO3C011656 vs. ExPASy TrEMBL
Match:
A0A5D3BWW4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold121G00630 PE=4 SV=1)
HSP 1 Score: 245.7 bits (626), Expect = 1.0e-61
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0
Query: 1 MSINQNHLLRLVLSCRKITAQVTNPATSSIIAMASSSEQEFVAYYRSKLHRFPRSNNFWD 60
MSINQNHLLRLVLSCRKITAQVTNPATSSIIAMASSSEQEFVAYYRSKLHRFPRSNNFWD
Sbjct: 1 MSINQNHLLRLVLSCRKITAQVTNPATSSIIAMASSSEQEFVAYYRSKLHRFPRSNNFWD 60
Query: 61 SKVASRVGIKLGHRLKEIGVSDVRIDLAEELSRPIYYRKMVLPLFDSVQRSGIAVDGVEK 120
SKVASRVGIKLGHRLKEIGVSDVRIDLAEELSRPIYYRKMVLPLFDSVQRSGIAVDGVEK
Sbjct: 61 SKVASRVGIKLGHRLKEIGVSDVRIDLAEELSRPIYYRKMVLPLFDSVQRSGIAVDGVEK 120
Query: 121 LGKGSI 127
LGKGSI
Sbjct: 121 LGKGSI 126
BLAST of MELO3C011656 vs. ExPASy TrEMBL
Match:
A0A1S4DVU4 (uncharacterized protein LOC103488672 OS=Cucumis melo OX=3656 GN=LOC103488672 PE=4 SV=1)
HSP 1 Score: 245.7 bits (626), Expect = 1.0e-61
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0
Query: 1 MSINQNHLLRLVLSCRKITAQVTNPATSSIIAMASSSEQEFVAYYRSKLHRFPRSNNFWD 60
MSINQNHLLRLVLSCRKITAQVTNPATSSIIAMASSSEQEFVAYYRSKLHRFPRSNNFWD
Sbjct: 1 MSINQNHLLRLVLSCRKITAQVTNPATSSIIAMASSSEQEFVAYYRSKLHRFPRSNNFWD 60
Query: 61 SKVASRVGIKLGHRLKEIGVSDVRIDLAEELSRPIYYRKMVLPLFDSVQRSGIAVDGVEK 120
SKVASRVGIKLGHRLKEIGVSDVRIDLAEELSRPIYYRKMVLPLFDSVQRSGIAVDGVEK
Sbjct: 61 SKVASRVGIKLGHRLKEIGVSDVRIDLAEELSRPIYYRKMVLPLFDSVQRSGIAVDGVEK 120
Query: 121 LGKGSI 127
LGKGSI
Sbjct: 121 LGKGSI 126
BLAST of MELO3C011656 vs. ExPASy TrEMBL
Match:
A0A0A0KE39 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G042360 PE=4 SV=1)
HSP 1 Score: 238.8 bits (608), Expect = 1.2e-59
Identity = 122/126 (96.83%), Postives = 123/126 (97.62%), Query Frame = 0
Query: 1 MSINQNHLLRLVLSCRKITAQVTNPATSSIIAMASSSEQEFVAYYRSKLHRFPRSNNFWD 60
MSINQNHLLRLVLSCRKITAQVTNPATSSIIAMASSSEQEFVAYYRSKLHRFPRSNNFWD
Sbjct: 1 MSINQNHLLRLVLSCRKITAQVTNPATSSIIAMASSSEQEFVAYYRSKLHRFPRSNNFWD 60
Query: 61 SKVASRVGIKLGHRLKEIGVSDVRIDLAEELSRPIYYRKMVLPLFDSVQRSGIAVDGVEK 120
SKVASRVG KLGHRLKEIGVSDVRIDLAEELSRPIYYRKMVLPLFDSVQRSG+AVDG EK
Sbjct: 61 SKVASRVGEKLGHRLKEIGVSDVRIDLAEELSRPIYYRKMVLPLFDSVQRSGVAVDGAEK 120
Query: 121 LGKGSI 127
LG GSI
Sbjct: 121 LGTGSI 126
BLAST of MELO3C011656 vs. ExPASy TrEMBL
Match:
A0A6J1JZ79 (uncharacterized protein LOC111488745 OS=Cucurbita maxima OX=3661 GN=LOC111488745 PE=4 SV=1)
HSP 1 Score: 224.2 bits (570), Expect = 3.1e-55
Identity = 112/126 (88.89%), Postives = 119/126 (94.44%), Query Frame = 0
Query: 1 MSINQNHLLRLVLSCRKITAQVTNPATSSIIAMASSSEQEFVAYYRSKLHRFPRSNNFWD 60
MSINQNHLLRLVLSCRKITAQVTNP TS+IIAMASSSEQEFVAYY SKLHRFPRSNNFWD
Sbjct: 1 MSINQNHLLRLVLSCRKITAQVTNPDTSTIIAMASSSEQEFVAYYHSKLHRFPRSNNFWD 60
Query: 61 SKVASRVGIKLGHRLKEIGVSDVRIDLAEELSRPIYYRKMVLPLFDSVQRSGIAVDGVEK 120
SK+ASRVG KLGHRLKEIGVSDVRIDLAEELSRP+YYR VLPLFDSV+RSG+AV+G EK
Sbjct: 61 SKIASRVGEKLGHRLKEIGVSDVRIDLAEELSRPVYYRNRVLPLFDSVRRSGVAVNGAEK 120
Query: 121 LGKGSI 127
LG G+I
Sbjct: 121 LGSGAI 126
BLAST of MELO3C011656 vs. ExPASy TrEMBL
Match:
A0A6J1EVG7 (uncharacterized protein LOC111436340 OS=Cucurbita moschata OX=3662 GN=LOC111436340 PE=4 SV=1)
HSP 1 Score: 219.2 bits (557), Expect = 1.0e-53
Identity = 111/126 (88.10%), Postives = 118/126 (93.65%), Query Frame = 0
Query: 1 MSINQNHLLRLVLSCRKITAQVTNPATSSIIAMASSSEQEFVAYYRSKLHRFPRSNNFWD 60
MSINQNHLLRLVLSCRKITAQVTNP TS+IIAMASSSEQEFVAY RSKLHRFPRSNNFWD
Sbjct: 1 MSINQNHLLRLVLSCRKITAQVTNPDTSTIIAMASSSEQEFVAYNRSKLHRFPRSNNFWD 60
Query: 61 SKVASRVGIKLGHRLKEIGVSDVRIDLAEELSRPIYYRKMVLPLFDSVQRSGIAVDGVEK 120
SK+ASRVG KLGHRLKEIGVSDVRIDLAEELSRP+ YR VLPLFDSV+RSG+AV+G EK
Sbjct: 61 SKIASRVGEKLGHRLKEIGVSDVRIDLAEELSRPVSYRNRVLPLFDSVRRSGVAVNGAEK 120
Query: 121 LGKGSI 127
LG G+I
Sbjct: 121 LGSGAI 126
BLAST of MELO3C011656 vs. TAIR 10
Match:
AT2G43310.1 (Ribosomal L18p/L5e family protein )
HSP 1 Score: 164.9 bits (416), Expect = 4.3e-41
Identity = 84/123 (68.29%), Postives = 103/123 (83.74%), Query Frame = 0
Query: 4 NQNHLLRLVLSCRKITAQVTNPATSSIIAMASSSEQEFVAYYRSKLHRFPRSNNFWDSKV 63
+++HLL+LVLSCRKITAQVT P +S+IIAMASSSEQEF+A R+ L+RFP SN+FWDSK
Sbjct: 5 HRHHLLQLVLSCRKITAQVTQPGSSTIIAMASSSEQEFLAKSRANLYRFPHSNHFWDSKT 64
Query: 64 ASRVGIKLGHRLKEIGVSDVRIDLAEELSRPIYYRKMVLPLFDSVQRSGIAVDGVEKLGK 123
ASRVG KLG RL+E+GV V ID EE+SRPI++RK VLPLFDSV+R+GI VDG E+L
Sbjct: 65 ASRVGEKLGLRLRELGVDVVSIDADEEISRPIHHRKRVLPLFDSVRRTGIRVDGTEQLND 124
Query: 124 GSI 127
S+
Sbjct: 125 ISV 127
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_016900104.1 | 2.1e-61 | 100.00 | PREDICTED: uncharacterized protein LOC103488672 [Cucumis melo] >KAA0033043.1 hyp... | [more] |
XP_004140885.1 | 2.5e-59 | 96.83 | uncharacterized protein LOC101204363 [Cucumis sativus] | [more] |
KAE8646622.1 | 8.1e-58 | 97.54 | hypothetical protein Csa_005380 [Cucumis sativus] | [more] |
XP_038884098.1 | 4.0e-57 | 92.80 | uncharacterized protein LOC120075027 isoform X5 [Benincasa hispida] | [more] |
XP_038884099.1 | 4.0e-57 | 92.80 | uncharacterized protein LOC120075027 isoform X6 [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3BWW4 | 1.0e-61 | 100.00 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A1S4DVU4 | 1.0e-61 | 100.00 | uncharacterized protein LOC103488672 OS=Cucumis melo OX=3656 GN=LOC103488672 PE=... | [more] |
A0A0A0KE39 | 1.2e-59 | 96.83 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G042360 PE=4 SV=1 | [more] |
A0A6J1JZ79 | 3.1e-55 | 88.89 | uncharacterized protein LOC111488745 OS=Cucurbita maxima OX=3661 GN=LOC111488745... | [more] |
A0A6J1EVG7 | 1.0e-53 | 88.10 | uncharacterized protein LOC111436340 OS=Cucurbita moschata OX=3662 GN=LOC1114363... | [more] |
Match Name | E-value | Identity | Description | |
AT2G43310.1 | 4.3e-41 | 68.29 | Ribosomal L18p/L5e family protein | [more] |