MELO3C010391 (gene) Melon (DHL92) v4

Overview
NameMELO3C010391
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionNon-specific lipid-transfer protein 2-like
Locationchr07: 10339566 .. 10339859 (-)
RNA-Seq ExpressionMELO3C010391
SyntenyMELO3C010391
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGAGATTGTCAATAACAAGTCTATGTGTTTTGGTGGCTGTGGTGGAGACGATGGCGCTTCTAAGTGGAGCTCCTTCGGTCAATGCAGTGGAATGCATTCCTCAGGAGCTGACCCCGTGTATTGATGCAATTAAATCCTCGTCGGTGGCGCCGTCGAGCATTTGCTGCATGAAGATGGAAGAGCAGGCGCCGTGCCTATGCCAATACGCTAAGATTCCAAGCTTCAAGCCTTTAATTGCCGGCGGGCAACGGGTTGCCGCTGTTTGCGGCGTCACCCTTCCAGTGTGTTAA

mRNA sequence

ATGATGAGATTGTCAATAACAAGTCTATGTGTTTTGGTGGCTGTGGTGGAGACGATGGCGCTTCTAAGTGGAGCTCCTTCGGTCAATGCAGTGGAATGCATTCCTCAGGAGCTGACCCCGTGTATTGATGCAATTAAATCCTCGTCGGTGGCGCCGTCGAGCATTTGCTGCATGAAGATGGAAGAGCAGGCGCCGTGCCTATGCCAATACGCTAAGATTCCAAGCTTCAAGCCTTTAATTGCCGGCGGGCAACGGGTTGCCGCTGTTTGCGGCGTCACCCTTCCAGTGTGTTAA

Coding sequence (CDS)

ATGATGAGATTGTCAATAACAAGTCTATGTGTTTTGGTGGCTGTGGTGGAGACGATGGCGCTTCTAAGTGGAGCTCCTTCGGTCAATGCAGTGGAATGCATTCCTCAGGAGCTGACCCCGTGTATTGATGCAATTAAATCCTCGTCGGTGGCGCCGTCGAGCATTTGCTGCATGAAGATGGAAGAGCAGGCGCCGTGCCTATGCCAATACGCTAAGATTCCAAGCTTCAAGCCTTTAATTGCCGGCGGGCAACGGGTTGCCGCTGTTTGCGGCGTCACCCTTCCAGTGTGTTAA

Protein sequence

MMRLSITSLCVLVAVVETMALLSGAPSVNAVECIPQELTPCIDAIKSSSVAPSSICCMKMEEQAPCLCQYAKIPSFKPLIAGGQRVAAVCGVTLPVC
Homology
BLAST of MELO3C010391 vs. NCBI nr
Match: KAA0064150.1 (non-specific lipid-transfer protein 2-like [Cucumis melo var. makuwa] >TYK16011.1 non-specific lipid-transfer protein 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 160.6 bits (405), Expect = 6.7e-36
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0

Query: 19 MALLSGAPSVNAVECIPQELTPCIDAIKSSSVAPSSICCMKMEEQAPCLCQYAKIPSFKP 78
          MALLSGAPSVNAVECIPQELTPCIDAIKSSSVAPSSICCMKMEEQAPCLCQYAKIPSFKP
Sbjct: 1  MALLSGAPSVNAVECIPQELTPCIDAIKSSSVAPSSICCMKMEEQAPCLCQYAKIPSFKP 60

Query: 79 LIAGGQRVAAVCGVTLPVC 98
          LIAGGQRVAAVCGVTLPVC
Sbjct: 61 LIAGGQRVAAVCGVTLPVC 79

BLAST of MELO3C010391 vs. NCBI nr
Match: KAE8648023.1 (hypothetical protein Csa_005844, partial [Cucumis sativus])

HSP 1 Score: 121.7 bits (304), Expect = 3.5e-24
Identity = 58/63 (92.06%), Postives = 58/63 (92.06%), Query Frame = 0

Query: 35 PQELTPCIDAIKSSSVAPSSICCMKMEEQAPCLCQYAKIPSFKPLIAGGQRVAAVCGVTL 94
          P    PCIDAIKSSSV PSSICCMKMEEQAPCLCQYAKIPSFKPLIAGGQRVAAVCGVTL
Sbjct: 34 PSGADPCIDAIKSSSVVPSSICCMKMEEQAPCLCQYAKIPSFKPLIAGGQRVAAVCGVTL 93

Query: 95 PVC 98
          PVC
Sbjct: 94 PVC 96

BLAST of MELO3C010391 vs. NCBI nr
Match: XP_022955891.1 (non-specific lipid-transfer protein 2-like [Cucurbita moschata])

HSP 1 Score: 121.3 bits (303), Expect = 4.5e-24
Identity = 62/97 (63.92%), Postives = 74/97 (76.29%), Query Frame = 0

Query: 1  MMRLSITSLCVLVAVVETMALLSGAPSVNAVECIPQELTPCIDAIKSSSVAPSSICCMKM 60
          M RLSI+SLCVLVA V TMALL+GAP  +AV+C P EL+PC+ AI +SS  P+S CC KM
Sbjct: 1  MKRLSISSLCVLVAAVATMALLTGAPVADAVDCNPSELSPCLPAI-TSSTPPTSSCCQKM 60

Query: 61 EEQAPCLCQYAKIPSFKPLIAGGQRVAAVCGVTLPVC 98
           EQ PCLC Y K P FKP + GG+RVAA CG+T+P C
Sbjct: 61 VEQTPCLCGYFKNPEFKPYVTGGKRVAAACGLTVPEC 96

BLAST of MELO3C010391 vs. NCBI nr
Match: KAG6581743.1 (hypothetical protein SDJN03_21745, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 119.4 bits (298), Expect = 1.7e-23
Identity = 61/97 (62.89%), Postives = 73/97 (75.26%), Query Frame = 0

Query: 1  MMRLSITSLCVLVAVVETMALLSGAPSVNAVECIPQELTPCIDAIKSSSVAPSSICCMKM 60
          M RLSI+SLCVLVA   TMALL+GAP  +AV+C P EL+PC+ AI +SS  P+S CC KM
Sbjct: 1  MKRLSISSLCVLVAAAVTMALLTGAPVADAVDCNPSELSPCLPAI-TSSTPPTSSCCQKM 60

Query: 61 EEQAPCLCQYAKIPSFKPLIAGGQRVAAVCGVTLPVC 98
           EQ PCLC Y K P FKP + GG+RVAA CG+T+P C
Sbjct: 61 VEQTPCLCGYFKNPEFKPYVTGGKRVAAACGLTVPEC 96

BLAST of MELO3C010391 vs. NCBI nr
Match: XP_023527040.1 (non-specific lipid-transfer protein 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 118.2 bits (295), Expect = 3.8e-23
Identity = 60/97 (61.86%), Postives = 73/97 (75.26%), Query Frame = 0

Query: 1  MMRLSITSLCVLVAVVETMALLSGAPSVNAVECIPQELTPCIDAIKSSSVAPSSICCMKM 60
          M RLSI+SLCVLV  V +MALL+GAP  +AV+C P EL+PC+ AI +SS  P+S CC KM
Sbjct: 1  MKRLSISSLCVLVVAVASMALLTGAPVADAVDCNPSELSPCLPAI-TSSTPPTSSCCQKM 60

Query: 61 EEQAPCLCQYAKIPSFKPLIAGGQRVAAVCGVTLPVC 98
           EQ PCLC Y K P FKP + GG+RVAA CG+T+P C
Sbjct: 61 VEQTPCLCGYFKNPEFKPYVTGGKRVAAACGLTVPEC 96

BLAST of MELO3C010391 vs. ExPASy Swiss-Prot
Match: Q43681 (Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata OX=3917 PE=2 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 2.7e-11
Identity = 40/98 (40.82%), Postives = 56/98 (57.14%), Query Frame = 0

Query: 2  MRLSITSLCVLVAVVETMALLSGAPSVNAVECIPQELTPCIDAIKSSSVAPSSICCMKME 61
          M++ ++ +C +V V   + L+   P   AV C P EL+ C+ AI   S  PSS CC K++
Sbjct: 5  MKMKMSVVCAVVVV--ALFLIDVGPVAEAVTCNPTELSSCVPAITGGS-KPSSTCCSKLK 64

Query: 62 EQAPCLCQYAKIPSFKPLI--AGGQRVAAVCGVTLPVC 98
           Q PCLC Y K PS K  +   G ++V + CGVT P C
Sbjct: 65 VQEPCLCNYIKNPSLKQYVNSPGAKKVLSNCGVTYPNC 99

BLAST of MELO3C010391 vs. ExPASy Swiss-Prot
Match: P82353 (Non-specific lipid-transfer protein 2 OS=Prunus armeniaca OX=36596 PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 1.6e-08
Identity = 28/69 (40.58%), Postives = 43/69 (62.32%), Query Frame = 0

Query: 31 VECIPQELTPCIDAIKSSSVAPSSICCMKMEEQAPCLCQYAKIPSFKPLI--AGGQRVAA 90
          V C P +L+PC+  I S + +P++ CC K+ EQ PCLC Y K PS +  +     +++A+
Sbjct: 1  VTCSPVQLSPCLGPINSGAPSPTT-CCQKLREQRPCLCGYLKNPSLRQYVNSPNARKLAS 60

Query: 91 VCGVTLPVC 98
           CGV +P C
Sbjct: 61 NCGVPVPQC 68

BLAST of MELO3C010391 vs. ExPASy TrEMBL
Match: A0A0A0L0Z5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G135200 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 2.0e-41
Identity = 92/97 (94.85%), Postives = 94/97 (96.91%), Query Frame = 0

Query: 1  MMRLSITSLCVLVAVVETMALLSGAPSVNAVECIPQELTPCIDAIKSSSVAPSSICCMKM 60
          MMRLSITSLCVLVAVVE MALL+GA SV+AVECIPQELTPCIDAIKSSSV PSSICCMKM
Sbjct: 1  MMRLSITSLCVLVAVVEMMALLTGARSVDAVECIPQELTPCIDAIKSSSVVPSSICCMKM 60

Query: 61 EEQAPCLCQYAKIPSFKPLIAGGQRVAAVCGVTLPVC 98
          EEQAPCLCQYAKIPSFKPLIAGGQRVAAVCGVTLPVC
Sbjct: 61 EEQAPCLCQYAKIPSFKPLIAGGQRVAAVCGVTLPVC 97

BLAST of MELO3C010391 vs. ExPASy TrEMBL
Match: A0A5A7VA95 (Non-specific lipid-transfer protein 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3068G00070 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 3.3e-36
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0

Query: 19 MALLSGAPSVNAVECIPQELTPCIDAIKSSSVAPSSICCMKMEEQAPCLCQYAKIPSFKP 78
          MALLSGAPSVNAVECIPQELTPCIDAIKSSSVAPSSICCMKMEEQAPCLCQYAKIPSFKP
Sbjct: 1  MALLSGAPSVNAVECIPQELTPCIDAIKSSSVAPSSICCMKMEEQAPCLCQYAKIPSFKP 60

Query: 79 LIAGGQRVAAVCGVTLPVC 98
          LIAGGQRVAAVCGVTLPVC
Sbjct: 61 LIAGGQRVAAVCGVTLPVC 79

BLAST of MELO3C010391 vs. ExPASy TrEMBL
Match: A0A6J1GV37 (non-specific lipid-transfer protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111457740 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 2.2e-24
Identity = 62/97 (63.92%), Postives = 74/97 (76.29%), Query Frame = 0

Query: 1  MMRLSITSLCVLVAVVETMALLSGAPSVNAVECIPQELTPCIDAIKSSSVAPSSICCMKM 60
          M RLSI+SLCVLVA V TMALL+GAP  +AV+C P EL+PC+ AI +SS  P+S CC KM
Sbjct: 1  MKRLSISSLCVLVAAVATMALLTGAPVADAVDCNPSELSPCLPAI-TSSTPPTSSCCQKM 60

Query: 61 EEQAPCLCQYAKIPSFKPLIAGGQRVAAVCGVTLPVC 98
           EQ PCLC Y K P FKP + GG+RVAA CG+T+P C
Sbjct: 61 VEQTPCLCGYFKNPEFKPYVTGGKRVAAACGLTVPEC 96

BLAST of MELO3C010391 vs. ExPASy TrEMBL
Match: A0A6J1E135 (non-specific lipid-transfer protein 2-like OS=Momordica charantia OX=3673 GN=LOC111024980 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.9e-15
Identity = 49/99 (49.49%), Postives = 68/99 (68.69%), Query Frame = 0

Query: 1  MMRLSITSLCVLVAVVETMALLSGAPSVNAVECIPQELTPCIDAIKSSSVAPSSICCMKM 60
          M +  + SLC+LVAVV T+ALLSGA SV A  C P EL+PC+ AI +SS  PS++CC K+
Sbjct: 1  MKKFQVPSLCLLVAVVATVALLSGARSVEAA-CNPMELSPCLGAI-TSSAPPSTVCCQKL 60

Query: 61 EEQAPCLCQYAKIPSFKPLIAG--GQRVAAVCGVTLPVC 98
          ++Q PC C+YAK P  KP +     + VA++C + +P C
Sbjct: 61 KQQQPCFCEYAKDPRMKPYVESPRAKAVASICRIAVPRC 97

BLAST of MELO3C010391 vs. ExPASy TrEMBL
Match: A0A426YY11 (AAI domain-containing protein OS=Ensete ventricosum OX=4639 GN=B296_00031417 PE=3 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 1.2e-14
Identity = 49/97 (50.52%), Postives = 64/97 (65.98%), Query Frame = 0

Query: 2  MRLSITSLCVLVAVVETMALLSGAP-SVNAVECIPQELTPCIDAIKSSSVAPSSICCMKM 61
          M+ S+   CV+ A+     LL GAP +V+A  C P ELTPC  AI +SS  PSS+CC ++
Sbjct: 1  MKSSVVFFCVIAAL-----LLLGAPTAVDAATCDPSELTPCAAAILNSS-PPSSLCCSRL 60

Query: 62 EEQAPCLCQYAKIPSFKPLIAGGQRVAAVCGVTLPVC 98
          + QAPC CQY K PS    I+GG++VAA CGV +P C
Sbjct: 61 KSQAPCFCQYQKNPSLSKYISGGRKVAAACGVPIPSC 91

BLAST of MELO3C010391 vs. TAIR 10
Match: AT3G18280.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 67.0 bits (162), Expect = 9.5e-12
Identity = 39/99 (39.39%), Postives = 61/99 (61.62%), Query Frame = 0

Query: 1  MMRLSITSLCVLVAVVETMALLSGAPSVNAVECIPQELTPCIDAIKSSSVAPSSICCMKM 60
          M++ ++ SL  L AV+    L+  AP+  AV C P +L+PC  AI SSS  PS++CC K+
Sbjct: 3  MIKTTMVSLFALAAVL----LMILAPAAEAVTCSPMQLSPCATAITSSS-PPSALCCAKL 62

Query: 61 EEQAPCLCQYAKIPSFKPLIA--GGQRVAAVCGVTLPVC 98
          +EQ PCLC Y + PS +  ++    ++V+  C + +P C
Sbjct: 63 KEQRPCLCGYMRNPSLRRFVSTPNARKVSKSCKLPIPRC 96

BLAST of MELO3C010391 vs. TAIR 10
Match: AT2G14846.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 58.2 bits (139), Expect = 4.4e-09
Identity = 33/89 (37.08%), Postives = 49/89 (55.06%), Query Frame = 0

Query: 11 VLVAVVETMALLSGAPSVNAVECIPQELTPCIDAIKSSSVAPSSICCMKMEEQAPCLCQY 70
          VL ++  T A++        V CI  +L  C+ A+++ S  PS  CC K++EQ  CLC Y
Sbjct: 12 VLSSLAPTKAVVVRVEEEEKVVCIVTDLRVCLPAVEAGS-QPSVQCCGKLKEQLSCLCGY 71

Query: 71 AKIPSFKPLIAGG--QRVAAVCGVTLPVC 98
           KIPSF   ++ G  Q+V   C + +P C
Sbjct: 72 LKIPSFTQYVSSGKAQKVLTACAIPIPKC 99

BLAST of MELO3C010391 vs. TAIR 10
Match: AT1G43667.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 52.4 bits (124), Expect = 2.4e-07
Identity = 24/67 (35.82%), Postives = 35/67 (52.24%), Query Frame = 0

Query: 31 VECIPQELTPCIDAIKSSSVAPSSICCMKMEEQAPCLCQYAKIPSFKPLIAGGQRVAAVC 90
          V C   EL PC+ ++   S  PS+ CC K++EQ  C C Y + P F   I   +++ A C
Sbjct: 33 VACTVTELQPCLPSVIDGS-QPSTQCCEKLKEQNSCFCDYLQNPQFSQYITAAKQILAAC 92

Query: 91 GVTLPVC 98
           +  P C
Sbjct: 93 KIPYPNC 98

BLAST of MELO3C010391 vs. TAIR 10
Match: AT1G66850.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 52.0 bits (123), Expect = 3.1e-07
Identity = 27/69 (39.13%), Postives = 36/69 (52.17%), Query Frame = 0

Query: 31  VECIPQELTPCIDAIKSSSVAPSSICCMKMEEQAPCLCQYAKIPSFKPLIA--GGQRVAA 90
           V C  ++L PC+ AI      PS  CC K+ EQ  CLC +AK P+F   I+    ++V  
Sbjct: 35  VTCDARQLQPCLAAITGGG-QPSGACCAKLTEQQSCLCGFAKNPAFAQYISSPNARKVLL 94

Query: 91  VCGVTLPVC 98
            C V  P C
Sbjct: 95  ACNVAYPTC 102

BLAST of MELO3C010391 vs. TAIR 10
Match: AT1G73780.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 50.4 bits (119), Expect = 9.2e-07
Identity = 32/99 (32.32%), Postives = 51/99 (51.52%), Query Frame = 0

Query: 2  MRLSITSLCVLVAVVETMALLSGAPSVNAVE-CIPQELTPCIDAIKSSSVAPSSICCMKM 61
          M+ S T        +  + +++    V AV+ C P +L+PC++ I   S  PS +CC K+
Sbjct: 1  MKGSCTKPVFFTCTILLILIVAQENRVAAVDPCNPAQLSPCLETIMKGS-EPSDLCCSKV 60

Query: 62 EEQAPCLCQYAKIPSFKPLI--AGGQRVAAVCGVTLPVC 98
          +EQ  C+CQY K P+FK  +     + +A  C    P C
Sbjct: 61 KEQQHCICQYLKNPNFKSFLNSPNAKIIATDCHCPYPKC 98

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0064150.16.7e-36100.00non-specific lipid-transfer protein 2-like [Cucumis melo var. makuwa] >TYK16011.... [more]
KAE8648023.13.5e-2492.06hypothetical protein Csa_005844, partial [Cucumis sativus][more]
XP_022955891.14.5e-2463.92non-specific lipid-transfer protein 2-like [Cucurbita moschata][more]
KAG6581743.11.7e-2362.89hypothetical protein SDJN03_21745, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023527040.13.8e-2361.86non-specific lipid-transfer protein 2-like [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Q436812.7e-1140.82Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata OX=3917 ... [more]
P823531.6e-0840.58Non-specific lipid-transfer protein 2 OS=Prunus armeniaca OX=36596 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0L0Z52.0e-4194.85Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G135200 PE=4 SV=1[more]
A0A5A7VA953.3e-36100.00Non-specific lipid-transfer protein 2-like OS=Cucumis melo var. makuwa OX=119469... [more]
A0A6J1GV372.2e-2463.92non-specific lipid-transfer protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC1... [more]
A0A6J1E1351.9e-1549.49non-specific lipid-transfer protein 2-like OS=Momordica charantia OX=3673 GN=LOC... [more]
A0A426YY111.2e-1450.52AAI domain-containing protein OS=Ensete ventricosum OX=4639 GN=B296_00031417 PE=... [more]
Match NameE-valueIdentityDescription
AT3G18280.19.5e-1239.39Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
AT2G14846.14.4e-0937.08Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
AT1G43667.12.4e-0735.82Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
AT1G66850.13.1e-0739.13Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
AT1G73780.19.2e-0732.32Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036312Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamilyGENE3D1.10.110.10coord: 31..97
e-value: 5.1E-15
score: 57.5
IPR036312Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamilySUPERFAMILY47699Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumincoord: 33..97
NoneNo IPR availablePANTHERPTHR33214:SF44LIPID TRANSFER PROTEIN FAMILY PROTEIN-RELATEDcoord: 7..97
IPR033872Non-specific lipid-transfer protein type 2PANTHERPTHR33214BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEINcoord: 7..97

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C010391.1MELO3C010391.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006869 lipid transport