Sequences
The following sequences are available for this feature:
Legend: exon CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCACCAATGAATTACTGTATTTGTTTTGGAGCGCAGAAGAAGAAAAAGAGCAATAATCAAACAGATGGGCACAAAGGTGGCCGGAAATTCAGACCGCCGAGAGGACACGGAGGGAGAGCGGCAGGTGGTGGTTCCGGCGCTGGAAATGGTAACTTGGCTGTTCTGACTGATCATGATGGTGGTGTTGCCTTGGCGGCGACGACGCTTGGTTTTGCGGTTGCTGCAGCTGCGTTAGTTGATGCTGGGGAACATGGCGGAAGCTGTGGTGGTGGAGAGTGCGGCGGTGGTGGCTGTGGTGGTGGTTGA
ATGTCACCAATGAATTACTGTATTTGTTTTGGAGCGCAGAAGAAGAAAAAGAGCAATAATCAAACAGATGGGCACAAAGGTGGCCGGAAATTCAGACCGCCGAGAGGACACGGAGGGAGAGCGGCAGGTGGTGGTTCCGGCGCTGGAAATGGTAACTTGGCTGTTCTGACTGATCATGATGGTGGTGTTGCCTTGGCGGCGACGACGCTTGGTTTTGCGGTTGCTGCAGCTGCGTTAGTTGATGCTGGGGAACATGGCGGAAGCTGTGGTGGTGGAGAGTGCGGCGGTGGTGGCTGTGGTGGTGGTTGA
ATGTCACCAATGAATTACTGTATTTGTTTTGGAGCGCAGAAGAAGAAAAAGAGCAATAATCAAACAGATGGGCACAAAGGTGGCCGGAAATTCAGACCGCCGAGAGGACACGGAGGGAGAGCGGCAGGTGGTGGTTCCGGCGCTGGAAATGGTAACTTGGCTGTTCTGACTGATCATGATGGTGGTGTTGCCTTGGCGGCGACGACGCTTGGTTTTGCGGTTGCTGCAGCTGCGTTAGTTGATGCTGGGGAACATGGCGGAAGCTGTGGTGGTGGAGAGTGCGGCGGTGGTGGCTGTGGTGGTGGTTGA
MSPMNYCICFGAQKKKKSNNQTDGHKGGRKFRPPRGHGGRAAGGGSGAGNGNLAVLTDHDGGVALAATTLGFAVAAAALVDAGEHGGSCGGGECGGGGCGGG
Homology
BLAST of MELO3C009228 vs. NCBI nr
Match:
XP_023528737.1 (loricrin-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 123.2 bits (308), Expect = 1.3e-24
Identity = 73/97 (75.26%), Postives = 78/97 (80.41%), Query Frame = 0
BLAST of MELO3C009228 vs. NCBI nr
Match:
KAG6580518.1 (hypothetical protein SDJN03_20520, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 111.7 bits (278), Expect = 3.8e-21
Identity = 67/97 (69.07%), Postives = 74/97 (76.29%), Query Frame = 0
BLAST of MELO3C009228 vs. ExPASy TrEMBL
Match:
A0A0A0LDL8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G733910 PE=4 SV=1)
HSP 1 Score: 143.7 bits (361), Expect = 4.3e-31
Identity = 84/97 (86.60%), Postives = 86/97 (88.66%), Query Frame = 0
The following BLAST results are available for this feature:
Match Name E-value Identity Description
XP_023528737.1 1.3e-24 75.26 loricrin-like [Cucurbita pepo subsp. pepo] [more] KAG6580518.1 3.8e-21 69.07 hypothetical protein SDJN03_20520, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match Name E-value Identity Description
Match Name E-value Identity Description
A0A0A0LDL8 4.3e-31 86.60 Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G733910 PE=4 SV=1 [more]
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
A T G T C A C C A A T G A A T T A C T G T A T T T G T T T T G G A G C G C A G A A G A A G A A A A A G A G C A A T A A T C A A A C A G A T G G G C A C A A A G G T G G C C G G A A A T T C A G A C C G C C G A G A G G A C A C G G A G G G A G A G C G G C A G G T G G T G G T T C C G G C G C T G G A A A T G G T A A C T T G G C T G T T C T G A C T G A T C A T G A T G G T G G T G T T G C C T T G G C G G C G A C G A C G C T T G G T T T T G C G G T T G C T G C A G C T G C G T T A G T T G A T G C T G G G G A A C A T G G C G G A A G C T G T G G T G G T G G A G A G T G C G G C G G T G G T G G C T G T G G T G G T G G T T G A 50 100 150 200 250 300 Score = Sequence mobidb-lite
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 15..50
Relationships
The following mRNA feature(s) are a part of this gene:
