Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAAATTAAAAAAAAAAAAAGAAAAAAAAAAGAAAAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAACCAAAACCAAAAACCTCTGTTTTTCTTCAAAGAAAGCAAAAAGGGAAATGGATGGTTTGATTCCGATGTTTTATAGAGCGATGAAGAAAAATAGAAGGAGAAGGCAATATACAGTGCTTTCCACAAAAGCAGAATCAGAATCAGAAGGGGAAGCAGCTTCTTTATCTTTCAACATTGCTGATTTCTATGTGGATCCGCCTTCTATCAAATCTGAGGGCAGGGGTTACCGGAGATACAACTCATACGGCGGATCTACCCCTCAGGAGTGGCGGAGGAGTGGCGTAGCCGCCGGGAAGTCAAGGAGTCATGGGCAACCACCGGAACAACAGCTTGTTAGGTTCAGAAGCCAGAGGATTCTGTCCTGCTTGACTGGCCATTAAAATTTGTGAGCCCTTATTCTTCCAACTTTAAAATTAATCAATATGTACAGCATAATTATATCTTTCATCTTCAAAACTACTTGATGATGTTGATTCTCTTCAAGGCTTTTGTTTTAATCCAAATTTTGTGCATTTCTTTTTTCTTTTTTCTTTTTTCTTTTTCTTTTTTTTTTTTCTTGGTGGTTGTTGTGTATTGCAAAGTTGGTCAAAATGGAGATTGGTGGACAAGATTATCTTATTTGACTTTTTGTAAATCATGAGTTGTAATAAGAAATCAAATAAATCAACAAACCCATAACACCTACTTTT
mRNA sequence
AAAAAAATTAAAAAAAAAAAAAGAAAAAAAAAAGAAAAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAACCAAAACCAAAAACCTCTGTTTTTCTTCAAAGAAAGCAAAAAGGGAAATGGATGGTTTGATTCCGATGTTTTATAGAGCGATGAAGAAAAATAGAAGGAGAAGGCAATATACAGTGCTTTCCACAAAAGCAGAATCAGAATCAGAAGGGGAAGCAGCTTCTTTATCTTTCAACATTGCTGATTTCTATGTGGATCCGCCTTCTATCAAATCTGAGGGCAGGGGTTACCGGAGATACAACTCATACGGCGGATCTACCCCTCAGGAGTGGCGGAGGAGTGGCGTAGCCGCCGGGAAGTCAAGGAGTCATGGGCAACCACCGGAACAACAGCTTGTTAGGTTCAGAAGCCAGAGGATTCTGTCCTGCTTGACTGGCCATTAAAATTTGTGAGCCCTTATTCTTCCAACTTTAAAATTAATCAATATGTACAGCATAATTATATCTTTCATCTTCAAAACTACTTGATGATGTTGATTCTCTTCAAGGCTTTTGTTTTAATCCAAATTTTGTGCATTTCTTTTTTCTTTTTTCTTTTTTCTTTTTCTTTTTTTTTTTTCTTGGTGGTTGTTGTGTATTGCAAAGTTGGTCAAAATGGAGATTGGTGGACAAGATTATCTTATTTGACTTTTTGTAAATCATGAGTTGTAATAAGAAATCAAATAAATCAACAAACCCATAACACCTACTTTT
Coding sequence (CDS)
ATGGATGGTTTGATTCCGATGTTTTATAGAGCGATGAAGAAAAATAGAAGGAGAAGGCAATATACAGTGCTTTCCACAAAAGCAGAATCAGAATCAGAAGGGGAAGCAGCTTCTTTATCTTTCAACATTGCTGATTTCTATGTGGATCCGCCTTCTATCAAATCTGAGGGCAGGGGTTACCGGAGATACAACTCATACGGCGGATCTACCCCTCAGGAGTGGCGGAGGAGTGGCGTAGCCGCCGGGAAGTCAAGGAGTCATGGGCAACCACCGGAACAACAGCTTGTTAGGTTCAGAAGCCAGAGGATTCTGTCCTGCTTGACTGGCCATTAA
Protein sequence
MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVDPPSIKSEGRGYRRYNSYGGSTPQEWRRSGVAAGKSRSHGQPPEQQLVRFRSQRILSCLTGH
Homology
BLAST of MELO3C008506.jh1 vs. NCBI nr
Match:
XP_008441665.1 (PREDICTED: uncharacterized protein LOC103485749 [Cucumis melo] >KAA0032399.1 uncharacterized protein E6C27_scaffold219G002770 [Cucumis melo var. makuwa] >TYJ96351.1 uncharacterized protein E5676_scaffold1159G00090 [Cucumis melo var. makuwa])
HSP 1 Score: 224 bits (571), Expect = 7.31e-74
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0
Query: 1 MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVDPPSIKSEGRGY 60
MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVDPPSIKSEGRGY
Sbjct: 1 MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVDPPSIKSEGRGY 60
Query: 61 RRYNSYGGSTPQEWRRSGVAAGKSRSHGQPPEQQLVRFRSQRILSCLTGH 110
RRYNSYGGSTPQEWRRSGVAAGKSRSHGQPPEQQLVRFRSQRILSCLTGH
Sbjct: 61 RRYNSYGGSTPQEWRRSGVAAGKSRSHGQPPEQQLVRFRSQRILSCLTGH 110
BLAST of MELO3C008506.jh1 vs. NCBI nr
Match:
XP_004138944.1 (uncharacterized protein LOC101210346 [Cucumis sativus] >KGN61442.1 hypothetical protein Csa_006611 [Cucumis sativus])
HSP 1 Score: 206 bits (525), Expect = 7.62e-67
Identity = 102/110 (92.73%), Postives = 104/110 (94.55%), Query Frame = 0
Query: 1 MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVDPPSIKSEGRGY 60
MDGLIP+FYRAMKKNRRRRQYTVLSTKAESE+E EAASLSFNIADFYVDPPSIKSEGR Y
Sbjct: 1 MDGLIPLFYRAMKKNRRRRQYTVLSTKAESEAETEAASLSFNIADFYVDPPSIKSEGRAY 60
Query: 61 RRYNSYGGSTPQEWRRSGVAAGKSRSHGQPPEQQLVRFRSQRILSCLTGH 110
RRYNSY GST QEWRRSGVAAGKS SHG PPEQQLVRFRSQRILSCLTGH
Sbjct: 61 RRYNSYAGSTTQEWRRSGVAAGKSSSHGPPPEQQLVRFRSQRILSCLTGH 110
BLAST of MELO3C008506.jh1 vs. NCBI nr
Match:
TYK22824.1 (uncharacterized protein E5676_scaffold15341G00010 [Cucumis melo var. makuwa])
HSP 1 Score: 161 bits (407), Expect = 5.68e-49
Identity = 79/80 (98.75%), Postives = 79/80 (98.75%), Query Frame = 0
Query: 1 MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVDPPSIKSEGRGY 60
MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVDPPSIKSEGRGY
Sbjct: 1 MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVDPPSIKSEGRGY 60
Query: 61 RRYNSYGGSTPQEWRRSGVA 80
RRYNSYGGSTPQEWRRSG A
Sbjct: 61 RRYNSYGGSTPQEWRRSGXA 80
BLAST of MELO3C008506.jh1 vs. NCBI nr
Match:
XP_038875434.1 (uncharacterized protein LOC120067892 [Benincasa hispida])
HSP 1 Score: 158 bits (399), Expect = 1.28e-47
Identity = 86/115 (74.78%), Postives = 95/115 (82.61%), Query Frame = 0
Query: 1 MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVDPPSI------K 60
M+GLIPMFYRAMKKNR RRQY+VLS KAE+E+E AS+SFNIADFYVD PS K
Sbjct: 1 MEGLIPMFYRAMKKNRVRRQYSVLSPKAEAEAE---ASVSFNIADFYVDRPSSHVFPHSK 60
Query: 61 SEGRGYRRYNSYGGSTPQEWRRSGVAAGKSRSHGQPPEQQLVRFRSQRILSCLTG 109
S+GR YRRYNSYGGSTPQ+WRR+G A GKS HG PP+QQLVRFRSQRIL CLTG
Sbjct: 61 SDGRAYRRYNSYGGSTPQDWRRTGGAEGKS-GHG-PPQQQLVRFRSQRILCCLTG 110
BLAST of MELO3C008506.jh1 vs. NCBI nr
Match:
KAG7017165.1 (hypothetical protein SDJN02_22277, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 126 bits (317), Expect = 3.94e-35
Identity = 75/119 (63.03%), Postives = 83/119 (69.75%), Query Frame = 0
Query: 1 MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVDPPSI------K 60
M+GLIPMFYRAMKK R R QY+VLS +A + A S SFNIADFYVDPPS K
Sbjct: 1 MEGLIPMFYRAMKKTRIRSQYSVLSPEAAA-----APSPSFNIADFYVDPPSTHVFPTSK 60
Query: 61 SEG----RGYRRYNSYGGSTPQEWRRSGVAAGKSRSHGQPPEQQLVRFRSQRILSCLTG 109
SE R +RRYNS+GGSTP+EWRR+ AA SHG QLVRFRSQRILSCLTG
Sbjct: 61 SEDPGATRAHRRYNSFGGSTPEEWRRTTSAAAAKSSHGP----QLVRFRSQRILSCLTG 110
BLAST of MELO3C008506.jh1 vs. ExPASy TrEMBL
Match:
A0A5A7ST27 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1159G00090 PE=4 SV=1)
HSP 1 Score: 224 bits (571), Expect = 3.54e-74
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0
Query: 1 MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVDPPSIKSEGRGY 60
MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVDPPSIKSEGRGY
Sbjct: 1 MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVDPPSIKSEGRGY 60
Query: 61 RRYNSYGGSTPQEWRRSGVAAGKSRSHGQPPEQQLVRFRSQRILSCLTGH 110
RRYNSYGGSTPQEWRRSGVAAGKSRSHGQPPEQQLVRFRSQRILSCLTGH
Sbjct: 61 RRYNSYGGSTPQEWRRSGVAAGKSRSHGQPPEQQLVRFRSQRILSCLTGH 110
BLAST of MELO3C008506.jh1 vs. ExPASy TrEMBL
Match:
A0A1S3B4K9 (uncharacterized protein LOC103485749 OS=Cucumis melo OX=3656 GN=LOC103485749 PE=4 SV=1)
HSP 1 Score: 224 bits (571), Expect = 3.54e-74
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0
Query: 1 MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVDPPSIKSEGRGY 60
MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVDPPSIKSEGRGY
Sbjct: 1 MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVDPPSIKSEGRGY 60
Query: 61 RRYNSYGGSTPQEWRRSGVAAGKSRSHGQPPEQQLVRFRSQRILSCLTGH 110
RRYNSYGGSTPQEWRRSGVAAGKSRSHGQPPEQQLVRFRSQRILSCLTGH
Sbjct: 61 RRYNSYGGSTPQEWRRSGVAAGKSRSHGQPPEQQLVRFRSQRILSCLTGH 110
BLAST of MELO3C008506.jh1 vs. ExPASy TrEMBL
Match:
A0A0A0LL24 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G123040 PE=4 SV=1)
HSP 1 Score: 206 bits (525), Expect = 3.69e-67
Identity = 102/110 (92.73%), Postives = 104/110 (94.55%), Query Frame = 0
Query: 1 MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVDPPSIKSEGRGY 60
MDGLIP+FYRAMKKNRRRRQYTVLSTKAESE+E EAASLSFNIADFYVDPPSIKSEGR Y
Sbjct: 1 MDGLIPLFYRAMKKNRRRRQYTVLSTKAESEAETEAASLSFNIADFYVDPPSIKSEGRAY 60
Query: 61 RRYNSYGGSTPQEWRRSGVAAGKSRSHGQPPEQQLVRFRSQRILSCLTGH 110
RRYNSY GST QEWRRSGVAAGKS SHG PPEQQLVRFRSQRILSCLTGH
Sbjct: 61 RRYNSYAGSTTQEWRRSGVAAGKSSSHGPPPEQQLVRFRSQRILSCLTGH 110
BLAST of MELO3C008506.jh1 vs. ExPASy TrEMBL
Match:
A0A5D3DGT1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold15341G00010 PE=4 SV=1)
HSP 1 Score: 161 bits (407), Expect = 2.75e-49
Identity = 79/80 (98.75%), Postives = 79/80 (98.75%), Query Frame = 0
Query: 1 MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVDPPSIKSEGRGY 60
MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVDPPSIKSEGRGY
Sbjct: 1 MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVDPPSIKSEGRGY 60
Query: 61 RRYNSYGGSTPQEWRRSGVA 80
RRYNSYGGSTPQEWRRSG A
Sbjct: 61 RRYNSYGGSTPQEWRRSGXA 80
BLAST of MELO3C008506.jh1 vs. ExPASy TrEMBL
Match:
A0A6J1I2E5 (uncharacterized protein LOC111468990 OS=Cucurbita maxima OX=3661 GN=LOC111468990 PE=4 SV=1)
HSP 1 Score: 125 bits (314), Expect = 5.79e-35
Identity = 75/119 (63.03%), Postives = 83/119 (69.75%), Query Frame = 0
Query: 1 MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVDPPSI------K 60
M+GLIPMFYRAMKK R R QY+VLS +A + + A S SFNIADFYVDPPS K
Sbjct: 1 MEGLIPMFYRAMKKTRIRSQYSVLSPEAAAAA---APSPSFNIADFYVDPPSTHVFPTSK 60
Query: 61 SEG----RGYRRYNSYGGSTPQEWRRSGVAAGKSRSHGQPPEQQLVRFRSQRILSCLTG 109
SE R RRYNS+GGSTP+EWRR+ AA SHG QLVRFRSQRILSCLTG
Sbjct: 61 SEDPGAPRARRRYNSFGGSTPEEWRRTTSAAAGKSSHGP----QLVRFRSQRILSCLTG 112
BLAST of MELO3C008506.jh1 vs. TAIR 10
Match:
AT2G44010.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G59880.1); Has 18 Blast hits to 18 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 58.2 bits (139), Expect = 5.0e-09
Identity = 46/114 (40.35%), Postives = 62/114 (54.39%), Query Frame = 0
Query: 1 MDGLIPMFYRAMKKNRRRRQYTVLSTKAES-ESEGEAASLSFNIADFYVDPPSIKSEGRG 60
MDGLIPM +A+KKN RR+Y LS A + ES A+ + N+ +GR
Sbjct: 1 MDGLIPMALKAVKKNLTRRRYERLSYSATTRESYDFASDIEMNV------------DGRH 60
Query: 61 YRRYNSYGG----STPQEWRRSGVAAGKSRSHGQPPEQQLVRFRSQRILSCLTG 110
+RR S G S+ + R GVA KS + P E QLVRF+S R+ SC++G
Sbjct: 61 HRRGWSVGDFSSLSSRETKRNGGVAPEKSLT--PPREGQLVRFKSHRLFSCISG 100
BLAST of MELO3C008506.jh1 vs. TAIR 10
Match:
AT3G59880.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G44010.1); Has 20 Blast hits to 20 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 50.1 bits (118), Expect = 1.4e-06
Identity = 40/133 (30.08%), Postives = 68/133 (51.13%), Query Frame = 0
Query: 1 MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFY------------- 60
MDGLIPM ++AM+KNR R++Y LS+ A + + S++ +DF+
Sbjct: 1 MDGLIPMAFKAMRKNRTRKRYECLSSSAGTTKD------SYDDSDFFPFAAKSDHSVVSR 60
Query: 61 -------VDPPSIKSEGRGYRRYN--SYGGSTPQEWRRSGVAAGKSRSHGQPPEQ--QLV 110
++ ++ + R +R ++ + + +E +RSGV G G P + QLV
Sbjct: 61 PSSSFDHIEMNNVDVQQRHHRGWSVGDFSSMSCREGKRSGVDGG---DIGFSPSRRGQLV 120
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_008441665.1 | 7.31e-74 | 100.00 | PREDICTED: uncharacterized protein LOC103485749 [Cucumis melo] >KAA0032399.1 unc... | [more] |
XP_004138944.1 | 7.62e-67 | 92.73 | uncharacterized protein LOC101210346 [Cucumis sativus] >KGN61442.1 hypothetical ... | [more] |
TYK22824.1 | 5.68e-49 | 98.75 | uncharacterized protein E5676_scaffold15341G00010 [Cucumis melo var. makuwa] | [more] |
XP_038875434.1 | 1.28e-47 | 74.78 | uncharacterized protein LOC120067892 [Benincasa hispida] | [more] |
KAG7017165.1 | 3.94e-35 | 63.03 | hypothetical protein SDJN02_22277, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7ST27 | 3.54e-74 | 100.00 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A1S3B4K9 | 3.54e-74 | 100.00 | uncharacterized protein LOC103485749 OS=Cucumis melo OX=3656 GN=LOC103485749 PE=... | [more] |
A0A0A0LL24 | 3.69e-67 | 92.73 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G123040 PE=4 SV=1 | [more] |
A0A5D3DGT1 | 2.75e-49 | 98.75 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A6J1I2E5 | 5.79e-35 | 63.03 | uncharacterized protein LOC111468990 OS=Cucurbita maxima OX=3661 GN=LOC111468990... | [more] |
Match Name | E-value | Identity | Description | |
AT2G44010.1 | 5.0e-09 | 40.35 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |
AT3G59880.1 | 1.4e-06 | 30.08 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |