MELO3C008506.jh1 (gene) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonstart_codonCDSpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAATTAAAAAAAAAAAAAGAAAAAAAAAAGAAAAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAACCAAAACCAAAAACCTCTGTTTTTCTTCAAAGAAAGCAAAAAGGGAAATGGATGGTTTGATTCCGATGTTTTATAGAGCGATGAAGAAAAATAGAAGGAGAAGGCAATATACAGTGCTTTCCACAAAAGCAGAATCAGAATCAGAAGGGGAAGCAGCTTCTTTATCTTTCAACATTGCTGATTTCTATGTGGATCCGCCTTCTATCAAATCTGAGGGCAGGGGTTACCGGAGATACAACTCATACGGCGGATCTACCCCTCAGGAGTGGCGGAGGAGTGGCGTAGCCGCCGGGAAGTCAAGGAGTCATGGGCAACCACCGGAACAACAGCTTGTTAGGTTCAGAAGCCAGAGGATTCTGTCCTGCTTGACTGGCCATTAAAATTTGTGAGCCCTTATTCTTCCAACTTTAAAATTAATCAATATGTACAGCATAATTATATCTTTCATCTTCAAAACTACTTGATGATGTTGATTCTCTTCAAGGCTTTTGTTTTAATCCAAATTTTGTGCATTTCTTTTTTCTTTTTTCTTTTTTCTTTTTCTTTTTTTTTTTTCTTGGTGGTTGTTGTGTATTGCAAAGTTGGTCAAAATGGAGATTGGTGGACAAGATTATCTTATTTGACTTTTTGTAAATCATGAGTTGTAATAAGAAATCAAATAAATCAACAAACCCATAACACCTACTTTT AAAAAAATTAAAAAAAAAAAAAGAAAAAAAAAAGAAAAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAACCAAAACCAAAAACCTCTGTTTTTCTTCAAAGAAAGCAAAAAGGGAAATGGATGGTTTGATTCCGATGTTTTATAGAGCGATGAAGAAAAATAGAAGGAGAAGGCAATATACAGTGCTTTCCACAAAAGCAGAATCAGAATCAGAAGGGGAAGCAGCTTCTTTATCTTTCAACATTGCTGATTTCTATGTGGATCCGCCTTCTATCAAATCTGAGGGCAGGGGTTACCGGAGATACAACTCATACGGCGGATCTACCCCTCAGGAGTGGCGGAGGAGTGGCGTAGCCGCCGGGAAGTCAAGGAGTCATGGGCAACCACCGGAACAACAGCTTGTTAGGTTCAGAAGCCAGAGGATTCTGTCCTGCTTGACTGGCCATTAAAATTTGTGAGCCCTTATTCTTCCAACTTTAAAATTAATCAATATGTACAGCATAATTATATCTTTCATCTTCAAAACTACTTGATGATGTTGATTCTCTTCAAGGCTTTTGTTTTAATCCAAATTTTGTGCATTTCTTTTTTCTTTTTTCTTTTTTCTTTTTCTTTTTTTTTTTTCTTGGTGGTTGTTGTGTATTGCAAAGTTGGTCAAAATGGAGATTGGTGGACAAGATTATCTTATTTGACTTTTTGTAAATCATGAGTTGTAATAAGAAATCAAATAAATCAACAAACCCATAACACCTACTTTT ATGGATGGTTTGATTCCGATGTTTTATAGAGCGATGAAGAAAAATAGAAGGAGAAGGCAATATACAGTGCTTTCCACAAAAGCAGAATCAGAATCAGAAGGGGAAGCAGCTTCTTTATCTTTCAACATTGCTGATTTCTATGTGGATCCGCCTTCTATCAAATCTGAGGGCAGGGGTTACCGGAGATACAACTCATACGGCGGATCTACCCCTCAGGAGTGGCGGAGGAGTGGCGTAGCCGCCGGGAAGTCAAGGAGTCATGGGCAACCACCGGAACAACAGCTTGTTAGGTTCAGAAGCCAGAGGATTCTGTCCTGCTTGACTGGCCATTAA MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVDPPSIKSEGRGYRRYNSYGGSTPQEWRRSGVAAGKSRSHGQPPEQQLVRFRSQRILSCLTGH Homology
BLAST of MELO3C008506.jh1 vs. NCBI nr
Match: XP_008441665.1 (PREDICTED: uncharacterized protein LOC103485749 [Cucumis melo] >KAA0032399.1 uncharacterized protein E6C27_scaffold219G002770 [Cucumis melo var. makuwa] >TYJ96351.1 uncharacterized protein E5676_scaffold1159G00090 [Cucumis melo var. makuwa]) HSP 1 Score: 224 bits (571), Expect = 7.31e-74 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0
BLAST of MELO3C008506.jh1 vs. NCBI nr
Match: XP_004138944.1 (uncharacterized protein LOC101210346 [Cucumis sativus] >KGN61442.1 hypothetical protein Csa_006611 [Cucumis sativus]) HSP 1 Score: 206 bits (525), Expect = 7.62e-67 Identity = 102/110 (92.73%), Postives = 104/110 (94.55%), Query Frame = 0
BLAST of MELO3C008506.jh1 vs. NCBI nr
Match: TYK22824.1 (uncharacterized protein E5676_scaffold15341G00010 [Cucumis melo var. makuwa]) HSP 1 Score: 161 bits (407), Expect = 5.68e-49 Identity = 79/80 (98.75%), Postives = 79/80 (98.75%), Query Frame = 0
BLAST of MELO3C008506.jh1 vs. NCBI nr
Match: XP_038875434.1 (uncharacterized protein LOC120067892 [Benincasa hispida]) HSP 1 Score: 158 bits (399), Expect = 1.28e-47 Identity = 86/115 (74.78%), Postives = 95/115 (82.61%), Query Frame = 0
BLAST of MELO3C008506.jh1 vs. NCBI nr
Match: KAG7017165.1 (hypothetical protein SDJN02_22277, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 126 bits (317), Expect = 3.94e-35 Identity = 75/119 (63.03%), Postives = 83/119 (69.75%), Query Frame = 0
BLAST of MELO3C008506.jh1 vs. ExPASy TrEMBL
Match: A0A5A7ST27 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1159G00090 PE=4 SV=1) HSP 1 Score: 224 bits (571), Expect = 3.54e-74 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0
BLAST of MELO3C008506.jh1 vs. ExPASy TrEMBL
Match: A0A1S3B4K9 (uncharacterized protein LOC103485749 OS=Cucumis melo OX=3656 GN=LOC103485749 PE=4 SV=1) HSP 1 Score: 224 bits (571), Expect = 3.54e-74 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0
BLAST of MELO3C008506.jh1 vs. ExPASy TrEMBL
Match: A0A0A0LL24 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G123040 PE=4 SV=1) HSP 1 Score: 206 bits (525), Expect = 3.69e-67 Identity = 102/110 (92.73%), Postives = 104/110 (94.55%), Query Frame = 0
BLAST of MELO3C008506.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DGT1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold15341G00010 PE=4 SV=1) HSP 1 Score: 161 bits (407), Expect = 2.75e-49 Identity = 79/80 (98.75%), Postives = 79/80 (98.75%), Query Frame = 0
BLAST of MELO3C008506.jh1 vs. ExPASy TrEMBL
Match: A0A6J1I2E5 (uncharacterized protein LOC111468990 OS=Cucurbita maxima OX=3661 GN=LOC111468990 PE=4 SV=1) HSP 1 Score: 125 bits (314), Expect = 5.79e-35 Identity = 75/119 (63.03%), Postives = 83/119 (69.75%), Query Frame = 0
BLAST of MELO3C008506.jh1 vs. TAIR 10
Match: AT2G44010.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G59880.1); Has 18 Blast hits to 18 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 58.2 bits (139), Expect = 5.0e-09 Identity = 46/114 (40.35%), Postives = 62/114 (54.39%), Query Frame = 0
BLAST of MELO3C008506.jh1 vs. TAIR 10
Match: AT3G59880.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G44010.1); Has 20 Blast hits to 20 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 50.1 bits (118), Expect = 1.4e-06 Identity = 40/133 (30.08%), Postives = 68/133 (51.13%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|