MELO3C008506.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C008506.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr05: 12695915 .. 12696671 (+)
RNA-Seq ExpressionMELO3C008506.jh1
SyntenyMELO3C008506.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAAATTAAAAAAAAAAAAAGAAAAAAAAAAGAAAAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAACCAAAACCAAAAACCTCTGTTTTTCTTCAAAGAAAGCAAAAAGGGAAATGGATGGTTTGATTCCGATGTTTTATAGAGCGATGAAGAAAAATAGAAGGAGAAGGCAATATACAGTGCTTTCCACAAAAGCAGAATCAGAATCAGAAGGGGAAGCAGCTTCTTTATCTTTCAACATTGCTGATTTCTATGTGGATCCGCCTTCTATCAAATCTGAGGGCAGGGGTTACCGGAGATACAACTCATACGGCGGATCTACCCCTCAGGAGTGGCGGAGGAGTGGCGTAGCCGCCGGGAAGTCAAGGAGTCATGGGCAACCACCGGAACAACAGCTTGTTAGGTTCAGAAGCCAGAGGATTCTGTCCTGCTTGACTGGCCATTAAAATTTGTGAGCCCTTATTCTTCCAACTTTAAAATTAATCAATATGTACAGCATAATTATATCTTTCATCTTCAAAACTACTTGATGATGTTGATTCTCTTCAAGGCTTTTGTTTTAATCCAAATTTTGTGCATTTCTTTTTTCTTTTTTCTTTTTTCTTTTTCTTTTTTTTTTTTCTTGGTGGTTGTTGTGTATTGCAAAGTTGGTCAAAATGGAGATTGGTGGACAAGATTATCTTATTTGACTTTTTGTAAATCATGAGTTGTAATAAGAAATCAAATAAATCAACAAACCCATAACACCTACTTTT

mRNA sequence

AAAAAAATTAAAAAAAAAAAAAGAAAAAAAAAAGAAAAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAACCAAAACCAAAAACCTCTGTTTTTCTTCAAAGAAAGCAAAAAGGGAAATGGATGGTTTGATTCCGATGTTTTATAGAGCGATGAAGAAAAATAGAAGGAGAAGGCAATATACAGTGCTTTCCACAAAAGCAGAATCAGAATCAGAAGGGGAAGCAGCTTCTTTATCTTTCAACATTGCTGATTTCTATGTGGATCCGCCTTCTATCAAATCTGAGGGCAGGGGTTACCGGAGATACAACTCATACGGCGGATCTACCCCTCAGGAGTGGCGGAGGAGTGGCGTAGCCGCCGGGAAGTCAAGGAGTCATGGGCAACCACCGGAACAACAGCTTGTTAGGTTCAGAAGCCAGAGGATTCTGTCCTGCTTGACTGGCCATTAAAATTTGTGAGCCCTTATTCTTCCAACTTTAAAATTAATCAATATGTACAGCATAATTATATCTTTCATCTTCAAAACTACTTGATGATGTTGATTCTCTTCAAGGCTTTTGTTTTAATCCAAATTTTGTGCATTTCTTTTTTCTTTTTTCTTTTTTCTTTTTCTTTTTTTTTTTTCTTGGTGGTTGTTGTGTATTGCAAAGTTGGTCAAAATGGAGATTGGTGGACAAGATTATCTTATTTGACTTTTTGTAAATCATGAGTTGTAATAAGAAATCAAATAAATCAACAAACCCATAACACCTACTTTT

Coding sequence (CDS)

ATGGATGGTTTGATTCCGATGTTTTATAGAGCGATGAAGAAAAATAGAAGGAGAAGGCAATATACAGTGCTTTCCACAAAAGCAGAATCAGAATCAGAAGGGGAAGCAGCTTCTTTATCTTTCAACATTGCTGATTTCTATGTGGATCCGCCTTCTATCAAATCTGAGGGCAGGGGTTACCGGAGATACAACTCATACGGCGGATCTACCCCTCAGGAGTGGCGGAGGAGTGGCGTAGCCGCCGGGAAGTCAAGGAGTCATGGGCAACCACCGGAACAACAGCTTGTTAGGTTCAGAAGCCAGAGGATTCTGTCCTGCTTGACTGGCCATTAA

Protein sequence

MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVDPPSIKSEGRGYRRYNSYGGSTPQEWRRSGVAAGKSRSHGQPPEQQLVRFRSQRILSCLTGH
Homology
BLAST of MELO3C008506.jh1 vs. NCBI nr
Match: XP_008441665.1 (PREDICTED: uncharacterized protein LOC103485749 [Cucumis melo] >KAA0032399.1 uncharacterized protein E6C27_scaffold219G002770 [Cucumis melo var. makuwa] >TYJ96351.1 uncharacterized protein E5676_scaffold1159G00090 [Cucumis melo var. makuwa])

HSP 1 Score: 224 bits (571), Expect = 7.31e-74
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0

Query: 1   MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVDPPSIKSEGRGY 60
           MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVDPPSIKSEGRGY
Sbjct: 1   MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVDPPSIKSEGRGY 60

Query: 61  RRYNSYGGSTPQEWRRSGVAAGKSRSHGQPPEQQLVRFRSQRILSCLTGH 110
           RRYNSYGGSTPQEWRRSGVAAGKSRSHGQPPEQQLVRFRSQRILSCLTGH
Sbjct: 61  RRYNSYGGSTPQEWRRSGVAAGKSRSHGQPPEQQLVRFRSQRILSCLTGH 110

BLAST of MELO3C008506.jh1 vs. NCBI nr
Match: XP_004138944.1 (uncharacterized protein LOC101210346 [Cucumis sativus] >KGN61442.1 hypothetical protein Csa_006611 [Cucumis sativus])

HSP 1 Score: 206 bits (525), Expect = 7.62e-67
Identity = 102/110 (92.73%), Postives = 104/110 (94.55%), Query Frame = 0

Query: 1   MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVDPPSIKSEGRGY 60
           MDGLIP+FYRAMKKNRRRRQYTVLSTKAESE+E EAASLSFNIADFYVDPPSIKSEGR Y
Sbjct: 1   MDGLIPLFYRAMKKNRRRRQYTVLSTKAESEAETEAASLSFNIADFYVDPPSIKSEGRAY 60

Query: 61  RRYNSYGGSTPQEWRRSGVAAGKSRSHGQPPEQQLVRFRSQRILSCLTGH 110
           RRYNSY GST QEWRRSGVAAGKS SHG PPEQQLVRFRSQRILSCLTGH
Sbjct: 61  RRYNSYAGSTTQEWRRSGVAAGKSSSHGPPPEQQLVRFRSQRILSCLTGH 110

BLAST of MELO3C008506.jh1 vs. NCBI nr
Match: TYK22824.1 (uncharacterized protein E5676_scaffold15341G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 161 bits (407), Expect = 5.68e-49
Identity = 79/80 (98.75%), Postives = 79/80 (98.75%), Query Frame = 0

Query: 1  MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVDPPSIKSEGRGY 60
          MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVDPPSIKSEGRGY
Sbjct: 1  MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVDPPSIKSEGRGY 60

Query: 61 RRYNSYGGSTPQEWRRSGVA 80
          RRYNSYGGSTPQEWRRSG A
Sbjct: 61 RRYNSYGGSTPQEWRRSGXA 80

BLAST of MELO3C008506.jh1 vs. NCBI nr
Match: XP_038875434.1 (uncharacterized protein LOC120067892 [Benincasa hispida])

HSP 1 Score: 158 bits (399), Expect = 1.28e-47
Identity = 86/115 (74.78%), Postives = 95/115 (82.61%), Query Frame = 0

Query: 1   MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVDPPSI------K 60
           M+GLIPMFYRAMKKNR RRQY+VLS KAE+E+E   AS+SFNIADFYVD PS       K
Sbjct: 1   MEGLIPMFYRAMKKNRVRRQYSVLSPKAEAEAE---ASVSFNIADFYVDRPSSHVFPHSK 60

Query: 61  SEGRGYRRYNSYGGSTPQEWRRSGVAAGKSRSHGQPPEQQLVRFRSQRILSCLTG 109
           S+GR YRRYNSYGGSTPQ+WRR+G A GKS  HG PP+QQLVRFRSQRIL CLTG
Sbjct: 61  SDGRAYRRYNSYGGSTPQDWRRTGGAEGKS-GHG-PPQQQLVRFRSQRILCCLTG 110

BLAST of MELO3C008506.jh1 vs. NCBI nr
Match: KAG7017165.1 (hypothetical protein SDJN02_22277, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 126 bits (317), Expect = 3.94e-35
Identity = 75/119 (63.03%), Postives = 83/119 (69.75%), Query Frame = 0

Query: 1   MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVDPPSI------K 60
           M+GLIPMFYRAMKK R R QY+VLS +A +     A S SFNIADFYVDPPS       K
Sbjct: 1   MEGLIPMFYRAMKKTRIRSQYSVLSPEAAA-----APSPSFNIADFYVDPPSTHVFPTSK 60

Query: 61  SEG----RGYRRYNSYGGSTPQEWRRSGVAAGKSRSHGQPPEQQLVRFRSQRILSCLTG 109
           SE     R +RRYNS+GGSTP+EWRR+  AA    SHG     QLVRFRSQRILSCLTG
Sbjct: 61  SEDPGATRAHRRYNSFGGSTPEEWRRTTSAAAAKSSHGP----QLVRFRSQRILSCLTG 110

BLAST of MELO3C008506.jh1 vs. ExPASy TrEMBL
Match: A0A5A7ST27 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1159G00090 PE=4 SV=1)

HSP 1 Score: 224 bits (571), Expect = 3.54e-74
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0

Query: 1   MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVDPPSIKSEGRGY 60
           MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVDPPSIKSEGRGY
Sbjct: 1   MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVDPPSIKSEGRGY 60

Query: 61  RRYNSYGGSTPQEWRRSGVAAGKSRSHGQPPEQQLVRFRSQRILSCLTGH 110
           RRYNSYGGSTPQEWRRSGVAAGKSRSHGQPPEQQLVRFRSQRILSCLTGH
Sbjct: 61  RRYNSYGGSTPQEWRRSGVAAGKSRSHGQPPEQQLVRFRSQRILSCLTGH 110

BLAST of MELO3C008506.jh1 vs. ExPASy TrEMBL
Match: A0A1S3B4K9 (uncharacterized protein LOC103485749 OS=Cucumis melo OX=3656 GN=LOC103485749 PE=4 SV=1)

HSP 1 Score: 224 bits (571), Expect = 3.54e-74
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0

Query: 1   MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVDPPSIKSEGRGY 60
           MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVDPPSIKSEGRGY
Sbjct: 1   MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVDPPSIKSEGRGY 60

Query: 61  RRYNSYGGSTPQEWRRSGVAAGKSRSHGQPPEQQLVRFRSQRILSCLTGH 110
           RRYNSYGGSTPQEWRRSGVAAGKSRSHGQPPEQQLVRFRSQRILSCLTGH
Sbjct: 61  RRYNSYGGSTPQEWRRSGVAAGKSRSHGQPPEQQLVRFRSQRILSCLTGH 110

BLAST of MELO3C008506.jh1 vs. ExPASy TrEMBL
Match: A0A0A0LL24 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G123040 PE=4 SV=1)

HSP 1 Score: 206 bits (525), Expect = 3.69e-67
Identity = 102/110 (92.73%), Postives = 104/110 (94.55%), Query Frame = 0

Query: 1   MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVDPPSIKSEGRGY 60
           MDGLIP+FYRAMKKNRRRRQYTVLSTKAESE+E EAASLSFNIADFYVDPPSIKSEGR Y
Sbjct: 1   MDGLIPLFYRAMKKNRRRRQYTVLSTKAESEAETEAASLSFNIADFYVDPPSIKSEGRAY 60

Query: 61  RRYNSYGGSTPQEWRRSGVAAGKSRSHGQPPEQQLVRFRSQRILSCLTGH 110
           RRYNSY GST QEWRRSGVAAGKS SHG PPEQQLVRFRSQRILSCLTGH
Sbjct: 61  RRYNSYAGSTTQEWRRSGVAAGKSSSHGPPPEQQLVRFRSQRILSCLTGH 110

BLAST of MELO3C008506.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DGT1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold15341G00010 PE=4 SV=1)

HSP 1 Score: 161 bits (407), Expect = 2.75e-49
Identity = 79/80 (98.75%), Postives = 79/80 (98.75%), Query Frame = 0

Query: 1  MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVDPPSIKSEGRGY 60
          MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVDPPSIKSEGRGY
Sbjct: 1  MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVDPPSIKSEGRGY 60

Query: 61 RRYNSYGGSTPQEWRRSGVA 80
          RRYNSYGGSTPQEWRRSG A
Sbjct: 61 RRYNSYGGSTPQEWRRSGXA 80

BLAST of MELO3C008506.jh1 vs. ExPASy TrEMBL
Match: A0A6J1I2E5 (uncharacterized protein LOC111468990 OS=Cucurbita maxima OX=3661 GN=LOC111468990 PE=4 SV=1)

HSP 1 Score: 125 bits (314), Expect = 5.79e-35
Identity = 75/119 (63.03%), Postives = 83/119 (69.75%), Query Frame = 0

Query: 1   MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVDPPSI------K 60
           M+GLIPMFYRAMKK R R QY+VLS +A + +   A S SFNIADFYVDPPS       K
Sbjct: 1   MEGLIPMFYRAMKKTRIRSQYSVLSPEAAAAA---APSPSFNIADFYVDPPSTHVFPTSK 60

Query: 61  SEG----RGYRRYNSYGGSTPQEWRRSGVAAGKSRSHGQPPEQQLVRFRSQRILSCLTG 109
           SE     R  RRYNS+GGSTP+EWRR+  AA    SHG     QLVRFRSQRILSCLTG
Sbjct: 61  SEDPGAPRARRRYNSFGGSTPEEWRRTTSAAAGKSSHGP----QLVRFRSQRILSCLTG 112

BLAST of MELO3C008506.jh1 vs. TAIR 10
Match: AT2G44010.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G59880.1); Has 18 Blast hits to 18 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 58.2 bits (139), Expect = 5.0e-09
Identity = 46/114 (40.35%), Postives = 62/114 (54.39%), Query Frame = 0

Query: 1   MDGLIPMFYRAMKKNRRRRQYTVLSTKAES-ESEGEAASLSFNIADFYVDPPSIKSEGRG 60
           MDGLIPM  +A+KKN  RR+Y  LS  A + ES   A+ +  N+            +GR 
Sbjct: 1   MDGLIPMALKAVKKNLTRRRYERLSYSATTRESYDFASDIEMNV------------DGRH 60

Query: 61  YRRYNSYGG----STPQEWRRSGVAAGKSRSHGQPPEQQLVRFRSQRILSCLTG 110
           +RR  S G     S+ +  R  GVA  KS +   P E QLVRF+S R+ SC++G
Sbjct: 61  HRRGWSVGDFSSLSSRETKRNGGVAPEKSLT--PPREGQLVRFKSHRLFSCISG 100

BLAST of MELO3C008506.jh1 vs. TAIR 10
Match: AT3G59880.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G44010.1); Has 20 Blast hits to 20 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 50.1 bits (118), Expect = 1.4e-06
Identity = 40/133 (30.08%), Postives = 68/133 (51.13%), Query Frame = 0

Query: 1   MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFY------------- 60
           MDGLIPM ++AM+KNR R++Y  LS+ A +  +      S++ +DF+             
Sbjct: 1   MDGLIPMAFKAMRKNRTRKRYECLSSSAGTTKD------SYDDSDFFPFAAKSDHSVVSR 60

Query: 61  -------VDPPSIKSEGRGYRRYN--SYGGSTPQEWRRSGVAAGKSRSHGQPPEQ--QLV 110
                  ++  ++  + R +R ++   +   + +E +RSGV  G     G  P +  QLV
Sbjct: 61  PSSSFDHIEMNNVDVQQRHHRGWSVGDFSSMSCREGKRSGVDGG---DIGFSPSRRGQLV 120

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008441665.17.31e-74100.00PREDICTED: uncharacterized protein LOC103485749 [Cucumis melo] >KAA0032399.1 unc... [more]
XP_004138944.17.62e-6792.73uncharacterized protein LOC101210346 [Cucumis sativus] >KGN61442.1 hypothetical ... [more]
TYK22824.15.68e-4998.75uncharacterized protein E5676_scaffold15341G00010 [Cucumis melo var. makuwa][more]
XP_038875434.11.28e-4774.78uncharacterized protein LOC120067892 [Benincasa hispida][more]
KAG7017165.13.94e-3563.03hypothetical protein SDJN02_22277, partial [Cucurbita argyrosperma subsp. argyro... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7ST273.54e-74100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3B4K93.54e-74100.00uncharacterized protein LOC103485749 OS=Cucumis melo OX=3656 GN=LOC103485749 PE=... [more]
A0A0A0LL243.69e-6792.73Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G123040 PE=4 SV=1[more]
A0A5D3DGT12.75e-4998.75Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1I2E55.79e-3563.03uncharacterized protein LOC111468990 OS=Cucurbita maxima OX=3661 GN=LOC111468990... [more]
Match NameE-valueIdentityDescription
AT2G44010.15.0e-0940.35unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G59880.11.4e-0630.08unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..95
NoneNo IPR availablePANTHERPTHR35485OS01G0888900 PROTEINcoord: 1..109
NoneNo IPR availablePANTHERPTHR35485:SF4OS01G0888900 PROTEINcoord: 1..109

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C008506.jh1.t1MELO3C008506.jh1.t1mRNA