MELO3C006945 (gene) Melon (DHL92) v4

Overview
NameMELO3C006945
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionrRNA 2'-O-methyltransferase fibrillarin
Locationchr06: 7544365 .. 7547826 (-)
RNA-Seq ExpressionMELO3C006945
SyntenyMELO3C006945
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGCTAGTTCTCTATTGTTCTAAAACCCTAGCCGGAACTATCCTTCGGCGTTCCCTCTCTCGGTGACTGAAATGAGACCTCCTCGAGGTAGATTCCACAAACTACCAGTTCATGTACTCTTTGCGTTTTCTATTTTTAGGTTTCTGAGAATTATCTGTTGACTATAATGGAGAATGATAGTTCTAGTGCAATGTATTGTTTATCCGCTTGTTTCGATTTCGTGAATGAGTATGATCGTTTCCGTTCTTACTTCCTACTGAATCTCTTTCTATGTAATATCGTTGGACCGGTTGTTTGACAGTTGAGTCATGCTGTTTAGTGTTATCTTTTTCTTCTTTTACTTGTATTGTTTGTTTCATATCGTCTCTTTCTCTTTGTGCGTGTTTGTAATCTGGATAAGTTGGATATGTGCAGGCCGCGGCGGCGGCGGTGGGTTTAGGGGCAGAGGTGATGGAGGAAGGGGTGGTAGAGGAAGAGGTGGCGGTGGAGGTAGAGGCGGTGGTGGTGGTAGAGGTATGCAGAGCCGCGGTGGTGGTCGTGGAGGTGGAAGAGGTCGTGGTGGAGGTAGAGGAGGCGGTATGAAAGGTGGAAGCAAAGTTGTTGTTGAACCTCATAGACATGAGGGTATTTTCATAGCTAAGGGTAAAGAAGATGCTCTTGTCACGAAGAATATGGTCACTGGAGAATCTGTCTACAACGAGAAGAGGATATCCGTACAGGTGATTCTCGTTCAATAGTTATTTTCCAACAGAATGTTTTTTAGGTTTCAAATGACATTTATCAATGGGGGACTGTTATCTTGCGAAATTTTCATGTGTTTTTGATGTATTGTTGTTACCCAAGAGAAATTCTTGTTAGTGTTGATATCTCCAAACAGTTTGGGGTGGTTACGACACAATAGTCGGTGATTGTTATTTTTTGCCACTTGAATGATTTATGTAAGTTCATAGGTAGAGCATCAACACCTGCAATTTTTAGGAGTATACATATCTTTTTGTTTGTTGTATTTTTAAGCTGTCTGCCTAGCTAATTGTTTATATATTATGCCATTCAGAATGAAGATGGAACAAAAATTGAATACAGAGTTTGGAACCCATTTAGGTCTAAGTTGGCTGCTGCTGTTCTTGGTGGTGTTGATGACATATGGATTGTAAGTGCTTTTCACCTCCAATTTGATGTTTTAGTCGTTTAGCTGTTTCACTCTGTAGTTTGTTCCCTTTTTCCTTCCTAATTAGTTTGGTTACGTGTGTATTGTAGAAACCTGGTGCTCGAGTGTTGTATCTTGGTGCTGCTTCAGGAACAACGGTATCTCATGTCTCGGATGTTGTTGGCCCTGTAAGTATTTACCTAAAGAGTATCTTTTGGAGTTCTTGTGACGTGATTGTATGTTTACTTAACGATTGTTGTTGATTTTTTTTTTCAGACCGGAATAGTATATGCTGTTGAATTCTCCCATAGAAGTGGTAGAGATTTAGTCAACATGGCCAAGAAGCGCACAAATGTTATACCCATAATTGAAGATGCTAGACACCCAGCTAAGTATCGAATGTTGGTTGGTATGGTGGATGTGATATTTTCAGATGTTGCTCAGCCAGATCAGGTTCACTCTTTTTCTTTTTAATTTCTCATTTATCCTTATTATTCTTGGATGCGAACACGAATAAAATCGTAGGTCTTGTATTTTGTTTTTCCCCTTAATAACCCTTTTTAAGTTGTATTCGATGTATTTCTTTCCGTCTACTGTTTTCTTCTCTACAATTTTGTATTCATATTCACTTCATCTTTTTAGACACTAAATCCTTTTCTCCCCGGATTATTTAGCATATGACGAATTGCTCGGATTCCCCTTCAAGACTTCTTGAATGATGCACAACCCGAGTTTCTGATGCTGGAAGAAATGCTTTCGAATTGTCTTGATAAATTCTTTCTAAATTCCCTTTTTGTTTGATTCTAGCAGATTTCTTTTTCAAATTCTTTTATTGTTGTGTTTTCCATTTTCCCATTGTCCATCATCCTATTTTATTGTACCTCTTCTACTTGTGATTGAGTTGTCCATTTGGGTATTTTCATTTTACTATTCCTGATGAATTCTTTTGTTATTATTTTTGCACGTCATTGCCTTTTTTTTTTTTTATCTATGCTTTGATACTAATCAACTTGTTTTTTAGCACTTTTAGCAATAATTTGACATTTTATCTAAATTTCTATTTGTTCTCCAAGAAATAGCAAAATATTCCAAGTTAAATCTTGACATTTGCTCACTACGCATGCTTTTCTTTCTGTGTTTAGTAGAAAACTGTAACCTTTACCGATTACTTTAGAGATCAATCACAGAATAGGTCAATTATATTTTGATCTGGATGTTCCATCAAGTAGTCTAGTGGTAGAAAGGGAGACAATAGTCTCAATCCTCCCCCCACAAAAAATAAAGTACATTAACAAATTTTTGTGTACTTGTGTGCTTATGGTAATGATCGATTCTGGTTCTGCAAAAATAAAAAGATGAGATCTACCCTGAATCAGTTCAATTTGGGAGGTTTTAATCTTTCTTCGGGTCTACTTGAACCAGAGTAGAGAAGTGAGAAAATTAAGGAAAGAGAAGAACAATTATGTACATTGTTTAAATCATGTTTAGAAATGGGATTAATGGTATAACTTTGTGAGCCGGAGGTCGGAGGTCTGTCACCACATCCGTTCAGATTATATTATTGTTTGATAATAATTTTATTGTTTTTTAATCGTCCTGCAGTTTTTGAACATAAAGCTATGTAGATATCTTTCTTATCACTATTTTTGCCTTTTAGCTTAGCATGTGATGAGTTACTCGGATTCCCCTTCAAGACATCTTGAATGATGCACAACCCGAGTTTCTGATGCGTCCAGGAATAATATCTCATAACATTGATCAAACCGAACGCTTTCATCCGTCGCTCATTAATGTTTCATTGAACGATGTTTCAATTTCTTACATTTGACATTCTTTATCATCCCTTCAATGCAGGCAAGAATCTTAGCACTTAATGCGTCATACTTTCTCAAAGCCGGTGGCCATTTTGTTATATCTATCAAGGCCAACTGCATTGACTCGACGGTTCCTGCAGAGGCAGTGTTTGCAAGTGAAGTTAATAAGCTCAAAGCAGATCAGTTCAAACCGACTGAGCAGGTGACCCTCGAACCATTTGAGCGAGATCATGCTTGTGTTGTTGGTATCTATAGGGCCCCAAAGAAACAGAAGGCTGCTGCAGCGTAGACAGTTAAACTGTGATCTGTAGTTGATCAATGTTTCTTATCAGTAGCTTGTAGGCGAGGTCTTGACGTTGAAAGATAATCTCGATTGTAAGATTTTTGTCGTTCTCAATTTTGGTGATTATTGAGCAAAGAACTTCTGCTTCTTTTTTATTCTTCTTCTTCTTACTCCATTTATTTCTTATTAAACCAATTTTAGTAATTTATTGATGGTTG

mRNA sequence

GTGCTAGTTCTCTATTGTTCTAAAACCCTAGCCGGAACTATCCTTCGGCGTTCCCTCTCTCGGTGACTGAAATGAGACCTCCTCGAGGCCGCGGCGGCGGCGGTGGGTTTAGGGGCAGAGGTGATGGAGGAAGGGGTGGTAGAGGAAGAGGTGGCGGTGGAGGTAGAGGCGGTGGTGGTGGTAGAGGTATGCAGAGCCGCGGTGGTGGTCGTGGAGGTGGAAGAGGTCGTGGTGGAGGTAGAGGAGGCGGTATGAAAGGTGGAAGCAAAGTTGTTGTTGAACCTCATAGACATGAGGGTATTTTCATAGCTAAGGGTAAAGAAGATGCTCTTGTCACGAAGAATATGGTCACTGGAGAATCTGTCTACAACGAGAAGAGGATATCCGTACAGAATGAAGATGGAACAAAAATTGAATACAGAGTTTGGAACCCATTTAGGTCTAAGTTGGCTGCTGCTGTTCTTGGTGGTGTTGATGACATATGGATTAAACCTGGTGCTCGAGTGTTGTATCTTGGTGCTGCTTCAGGAACAACGGTATCTCATGTCTCGGATGTTGTTGGCCCTACCGGAATAGTATATGCTGTTGAATTCTCCCATAGAAGTGGTAGAGATTTAGTCAACATGGCCAAGAAGCGCACAAATGTTATACCCATAATTGAAGATGCTAGACACCCAGCTAAGTATCGAATGTTGGTTGGTATGGTGGATGTGATATTTTCAGATGTTGCTCAGCCAGATCAGGCAAGAATCTTAGCACTTAATGCGTCATACTTTCTCAAAGCCGGTGGCCATTTTGTTATATCTATCAAGGCCAACTGCATTGACTCGACGGTTCCTGCAGAGGCAGTGTTTGCAAGTGAAGTTAATAAGCTCAAAGCAGATCAGTTCAAACCGACTGAGCAGGTGACCCTCGAACCATTTGAGCGAGATCATGCTTGTGTTGTTGGTATCTATAGGGCCCCAAAGAAACAGAAGGCTGCTGCAGCGTAGACAGTTAAACTGTGATCTGTAGTTGATCAATGTTTCTTATCAGTAGCTTGTAGGCGAGGTCTTGACGTTGAAAGATAATCTCGATTGTAAGATTTTTGTCGTTCTCAATTTTGGTGATTATTGAGCAAAGAACTTCTGCTTCTTTTTTATTCTTCTTCTTCTTACTCCATTTATTTCTTATTAAACCAATTTTAGTAATTTATTGATGGTTG

Coding sequence (CDS)

ATGAGACCTCCTCGAGGCCGCGGCGGCGGCGGTGGGTTTAGGGGCAGAGGTGATGGAGGAAGGGGTGGTAGAGGAAGAGGTGGCGGTGGAGGTAGAGGCGGTGGTGGTGGTAGAGGTATGCAGAGCCGCGGTGGTGGTCGTGGAGGTGGAAGAGGTCGTGGTGGAGGTAGAGGAGGCGGTATGAAAGGTGGAAGCAAAGTTGTTGTTGAACCTCATAGACATGAGGGTATTTTCATAGCTAAGGGTAAAGAAGATGCTCTTGTCACGAAGAATATGGTCACTGGAGAATCTGTCTACAACGAGAAGAGGATATCCGTACAGAATGAAGATGGAACAAAAATTGAATACAGAGTTTGGAACCCATTTAGGTCTAAGTTGGCTGCTGCTGTTCTTGGTGGTGTTGATGACATATGGATTAAACCTGGTGCTCGAGTGTTGTATCTTGGTGCTGCTTCAGGAACAACGGTATCTCATGTCTCGGATGTTGTTGGCCCTACCGGAATAGTATATGCTGTTGAATTCTCCCATAGAAGTGGTAGAGATTTAGTCAACATGGCCAAGAAGCGCACAAATGTTATACCCATAATTGAAGATGCTAGACACCCAGCTAAGTATCGAATGTTGGTTGGTATGGTGGATGTGATATTTTCAGATGTTGCTCAGCCAGATCAGGCAAGAATCTTAGCACTTAATGCGTCATACTTTCTCAAAGCCGGTGGCCATTTTGTTATATCTATCAAGGCCAACTGCATTGACTCGACGGTTCCTGCAGAGGCAGTGTTTGCAAGTGAAGTTAATAAGCTCAAAGCAGATCAGTTCAAACCGACTGAGCAGGTGACCCTCGAACCATTTGAGCGAGATCATGCTTGTGTTGTTGGTATCTATAGGGCCCCAAAGAAACAGAAGGCTGCTGCAGCGTAG

Protein sequence

MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMQSRGGGRGGGRGRGGGRGGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRISVQNEDGTKIEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQKAAAA
Homology
[Close]
BLAST of MELO3C006945 vs. NCBI nr
Match: XP_008439295.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 36a-like [Cucumis melo])

HSP 1 Score: 562.0 bits (1447), Expect = 3.2e-156
Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 0 

Query: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMQSRGGGRGGGRGRGGGRGGG 60
           MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMQSRGGGRGGGRGRGGGRGGG
Sbjct: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMQSRGGGRGGGRGRGGGRGGG 60

Query: 61  MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRISVQNEDGTKIEYRVWN 120
           MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRISVQNEDGTKIEYRVWN
Sbjct: 61  MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRISVQNEDGTKIEYRVWN 120

Query: 121 PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR 180
           PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR
Sbjct: 121 PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR 180

Query: 181 DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG 240
           DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG
Sbjct: 181 DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG 240

Query: 241 HFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK 300
           HFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK
Sbjct: 241 HFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK 300

Query: 301 QKAAAA 307
           QKAAAA
Sbjct: 301 QKAAAA 306

[Close]
BLAST of MELO3C006945 vs. NCBI nr
Match: XP_023552409.1 (mediator of RNA polymerase II transcription subunit 36a-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 556.6 bits (1433), Expect = 1.3e-154
Identity = 302/305 (99.02%), Postives = 304/305 (99.67%), Query Frame = 0 

Query: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMQSRGGGRGGGRGRGGGRGGG 60
           MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGM SRGGGRGGGRGRGGGRGGG
Sbjct: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMASRGGGRGGGRGRGGGRGGG 60

Query: 61  MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRISVQNEDGTKIEYRVWN 120
           MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMV+GESVYNEKRISVQNEDGTK+EYRVWN
Sbjct: 61  MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWN 120

Query: 121 PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR 180
           PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR
Sbjct: 121 PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR 180

Query: 181 DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG 240
           DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG
Sbjct: 181 DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG 240

Query: 241 HFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK 300
           HFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK
Sbjct: 241 HFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK 300

Query: 301 QKAAA 306
           QKAAA
Sbjct: 301 QKAAA 305

[Close]
BLAST of MELO3C006945 vs. NCBI nr
Match: XP_022141240.1 (mediator of RNA polymerase II transcription subunit 36a-like [Momordica charantia])

HSP 1 Score: 554.3 bits (1427), Expect = 6.6e-154
Identity = 300/305 (98.36%), Postives = 303/305 (99.34%), Query Frame = 0 

Query: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMQSRGGGRGGGRGRGGGRGGG 60
           MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGM SRGGGRGGGRGRGGGRGGG
Sbjct: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMASRGGGRGGGRGRGGGRGGG 60

Query: 61  MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRISVQNEDGTKIEYRVWN 120
           MKGGSKVV+EPHRHEGIFIAKGKEDALVTKNMV+GESVYNEKRISVQNEDGTK+EYRVWN
Sbjct: 61  MKGGSKVVIEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWN 120

Query: 121 PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR 180
           PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR
Sbjct: 121 PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR 180

Query: 181 DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG 240
           DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG
Sbjct: 181 DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG 240

Query: 241 HFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK 300
           HFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK
Sbjct: 241 HFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK 300

Query: 301 QKAAA 306
           QK AA
Sbjct: 301 QKPAA 305

[Close]
BLAST of MELO3C006945 vs. NCBI nr
Match: XP_004140765.1 (mediator of RNA polymerase II transcription subunit 36a [Cucumis sativus])

HSP 1 Score: 553.1 bits (1424), Expect = 1.5e-153
Identity = 303/308 (98.38%), Postives = 305/308 (99.03%), Query Frame = 0 

Query: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMQSRGGGR--GGGRGRGGGRG 60
           MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGM SRGGGR  GGGRGRGGGRG
Sbjct: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMSSRGGGRGGGGGRGRGGGRG 60

Query: 61  GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRISVQNEDGTKIEYRV 120
           GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKR+SVQNEDGTKIEYRV
Sbjct: 61  GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRVSVQNEDGTKIEYRV 120

Query: 121 WNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRS 180
           WNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGP+GIVYAVEFSHRS
Sbjct: 121 WNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPSGIVYAVEFSHRS 180

Query: 181 GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKA 240
           GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKA
Sbjct: 181 GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKA 240

Query: 241 GGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAP 300
           GGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAP
Sbjct: 241 GGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAP 300

Query: 301 KKQKAAAA 307
           KKQKAAAA
Sbjct: 301 KKQKAAAA 308

[Close]
BLAST of MELO3C006945 vs. NCBI nr
Match: XP_022984980.1 (probable mediator of RNA polymerase II transcription subunit 36b [Cucurbita maxima] >KAG7014755.1 Mediator of RNA polymerase II transcription subunit 36a [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 552.0 bits (1421), Expect = 3.3e-153
Identity = 302/305 (99.02%), Postives = 304/305 (99.67%), Query Frame = 0 

Query: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMQSRGGGRGGGRGRGGGRGGG 60
           MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGM SRGGGRGGGRGRGGGRGGG
Sbjct: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGM-SRGGGRGGGRGRGGGRGGG 60

Query: 61  MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRISVQNEDGTKIEYRVWN 120
           MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMV+GESVYNEKRISVQNEDGTK+EYRVWN
Sbjct: 61  MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWN 120

Query: 121 PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR 180
           PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR
Sbjct: 121 PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR 180

Query: 181 DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG 240
           DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG
Sbjct: 181 DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG 240

Query: 241 HFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK 300
           HFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK
Sbjct: 241 HFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK 300

Query: 301 QKAAA 306
           QKAAA
Sbjct: 301 QKAAA 304

[Close]
BLAST of MELO3C006945 vs. ExPASy Swiss-Prot
Match: Q94AH9 (rRNA 2'-O-methyltransferase fibrillarin 2 OS=Arabidopsis thaliana OX=3702 GN=FIB2 PE=1 SV=2)

HSP 1 Score: 448.0 bits (1151), Expect = 8.7e-125
Identity = 263/319 (82.45%), Postives = 275/319 (86.21%), Query Frame = 0 

Query: 1   MRPPRGRGGGGGFRGRGDGG-RGGRGRGG-GGGRGG---GGGRGMQSRGG-GRGGGRGRG 60
           MRPP    GGG   GRG GG  GGRG GG  GGRGG   GGGRG   RGG GRG G  RG
Sbjct: 1   MRPPLTGSGGGFSGGRGRGGYSGGRGDGGFSGGRGGGGRGGGRGFSDRGGRGRGRGPPRG 60

Query: 61  GGRG-------GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRISVQ 120
           G RG       GGMKGGSKV+VEPHRH G+FIAKGKEDALVTKN+V GE+VYNEKRISVQ
Sbjct: 61  GARGGRGPAGRGGMKGGSKVIVEPHRHAGVFIAKGKEDALVTKNLVPGEAVYNEKRISVQ 120

Query: 121 NEDGTKIEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTG 180
           NEDGTK EYRVWNPFRSKLAAA+LGGVD+IWIKPGA+VLYLGAASGTTVSHVSD+VGP G
Sbjct: 121 NEDGTKTEYRVWNPFRSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDLVGPEG 180

Query: 181 IVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARI 240
            VYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARI
Sbjct: 181 CVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARI 240

Query: 241 LALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERD 300
           LALNASYFLK+GGHFVISIKANCIDSTVPAEAVF +EV KL+ +QFKP EQVTLEPFERD
Sbjct: 241 LALNASYFLKSGGHFVISIKANCIDSTVPAEAVFQTEVKKLQQEQFKPAEQVTLEPFERD 300

Query: 301 HACVVGIYRAPKKQKAAAA 307
           HACVVG YR PKK KAA A
Sbjct: 301 HACVVGGYRMPKKPKAATA 319

[Close]
BLAST of MELO3C006945 vs. ExPASy Swiss-Prot
Match: Q9FEF8 (rRNA 2'-O-methyltransferase fibrillarin 1 OS=Arabidopsis thaliana OX=3702 GN=FIB1 PE=1 SV=1)

HSP 1 Score: 446.8 bits (1148), Expect = 1.9e-124
Identity = 257/312 (82.37%), Postives = 270/312 (86.54%), Query Frame = 0 

Query: 1   MRPP-RGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRG-----MQSRGGGRGGGRGRG 60
           MRPP  G  GGGGFR    GGR G GRG GGGR  GGGR         RG GRG  RGRG
Sbjct: 1   MRPPVTGGRGGGGFR----GGRDGGGRGFGGGRSFGGGRSGDRGRSGPRGRGRGAPRGRG 60

Query: 61  GGRGGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRISVQNEDGTKI 120
           G   GGMKGGSKV+VEPHRH G+FIAKGKEDALVTKN+V GE+VYNEKRISVQNEDGTK+
Sbjct: 61  GPPRGGMKGGSKVIVEPHRHAGVFIAKGKEDALVTKNLVPGEAVYNEKRISVQNEDGTKV 120

Query: 121 EYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEF 180
           EYRVWNPFRSKLAAA+LGGVD+IWIKPGA+VLYLGAASGTTVSHVSD+VGP G VYAVEF
Sbjct: 121 EYRVWNPFRSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEF 180

Query: 181 SHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASY 240
           SHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNAS+
Sbjct: 181 SHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASF 240

Query: 241 FLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGI 300
           FLK GGHFVISIKANCIDSTV AEAVF SEV KL+ +QFKP EQVTLEPFERDHACVVG 
Sbjct: 241 FLKTGGHFVISIKANCIDSTVAAEAVFQSEVKKLQQEQFKPAEQVTLEPFERDHACVVGG 300

Query: 301 YRAPKKQKAAAA 307
           YR PKKQK  A+
Sbjct: 301 YRMPKKQKTPAS 308

[Close]
BLAST of MELO3C006945 vs. ExPASy Swiss-Prot
Match: Q8I1F4 (rRNA 2'-O-methyltransferase fibrillarin OS=Drosophila erecta OX=7220 GN=Fib PE=3 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 7.9e-110
Identity = 231/307 (75.24%), Postives = 255/307 (83.06%), Query Frame = 0 

Query: 5   RGRGGGGGFRGRG--DGGRGGRGRGGG--------GGRGGGGGRGMQSRGGGRGGGRGRG 64
           RGRGGGG   GRG   GGRGG GRGGG        GGRGGGGGRG   RGGG  GG GRG
Sbjct: 41  RGRGGGGDRGGRGGFGGGRGGGGRGGGGGGGRGGFGGRGGGGGRGGGGRGGGGRGGGGRG 100

Query: 65  GGRGGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRISVQNEDGTKI 124
           GG  GG KGG  V +EPHRHEG+FIA+GKEDALVT+N V G  VY EKRISV+N +G KI
Sbjct: 101 GG-AGGFKGGKTVTIEPHRHEGVFIARGKEDALVTRNFVPGSEVYGEKRISVEN-NGEKI 160

Query: 125 EYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEF 184
           EYRVWNPFRSKLAAAVLGGV+ I + PG++VLYLGAASGTTVSHVSDVVGP G+VYAVEF
Sbjct: 161 EYRVWNPFRSKLAAAVLGGVEQIHMPPGSKVLYLGAASGTTVSHVSDVVGPEGLVYAVEF 220

Query: 185 SHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASY 244
           SHRSGRDL+N+AKKRTN+IPIIEDARHP KYRMLVGMVD IF+DVAQPDQ RI+ALNA +
Sbjct: 221 SHRSGRDLINVAKKRTNIIPIIEDARHPHKYRMLVGMVDTIFADVAQPDQGRIVALNAQH 280

Query: 245 FLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGI 302
           FLK GGHFVISIKA+CIDST   EAVFASEV K++AD+ KP EQ+TLEP+ERDHA VVG+
Sbjct: 281 FLKNGGHFVISIKASCIDSTAQPEAVFASEVKKMQADKLKPQEQLTLEPYERDHAVVVGV 340

[Close]
BLAST of MELO3C006945 vs. ExPASy Swiss-Prot
Match: Q9W1V3 (rRNA 2'-O-methyltransferase fibrillarin OS=Drosophila melanogaster OX=7227 GN=Fib PE=2 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 8.8e-109
Identity = 229/307 (74.59%), Postives = 254/307 (82.74%), Query Frame = 0 

Query: 5   RGRGGGGGFRGRG--DGGRGGRGRGGG--------GGRGGGGGRGMQSRGGGRGGGRGRG 64
           RGRGGGG   GRG   GGRGG GRGGG        GGRGGGGGRG   RGGG  GG GRG
Sbjct: 40  RGRGGGGDRGGRGGFGGGRGGGGRGGGGGGGRGAFGGRGGGGGRGGGGRGGGGRGGGGRG 99

Query: 65  GGRGGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRISVQNEDGTKI 124
           GG  GG KGG  V +EPHRHEG+FIA+GKEDALVT+N V G  VY EKRISV+  +G KI
Sbjct: 100 GG-AGGFKGGKTVTIEPHRHEGVFIARGKEDALVTRNFVPGSEVYGEKRISVET-NGEKI 159

Query: 125 EYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEF 184
           EYRVWNPFRSKLAAAVLGGV+ I + PG++VLYLGAASGTTVSHVSDVVGP G+VYAVEF
Sbjct: 160 EYRVWNPFRSKLAAAVLGGVEQIHMPPGSKVLYLGAASGTTVSHVSDVVGPEGLVYAVEF 219

Query: 185 SHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASY 244
           SHRSGRDL+N+AKKRTN+IPIIEDARHP KYRMLVGMVD IF+DVAQPDQ RI+ALNA +
Sbjct: 220 SHRSGRDLINVAKKRTNIIPIIEDARHPHKYRMLVGMVDTIFADVAQPDQGRIVALNAQH 279

Query: 245 FLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGI 302
           FLK GGHFVISIKA+CIDST   EAVFA+EV K++AD+ KP EQ+TLEP+ERDHA VVG+
Sbjct: 280 FLKNGGHFVISIKASCIDSTAQPEAVFAAEVKKMQADKLKPQEQLTLEPYERDHAVVVGV 339

[Close]
BLAST of MELO3C006945 vs. ExPASy Swiss-Prot
Match: P22509 (rRNA 2'-O-methyltransferase fibrillarin OS=Rattus norvegicus OX=10116 GN=Fbl PE=1 SV=2)

HSP 1 Score: 389.0 bits (998), Expect = 4.8e-107
Identity = 227/304 (74.67%), Postives = 253/304 (83.22%), Query Frame = 0 

Query: 6   GRGGGGGF-RGRGDGGRGGRGRGGGG----GRGGGGGRGMQSRGGGRGGGRGRGGGRGG- 65
           GRGG GGF  GRG  G GGRGRGGGG    GRGGGGGRG    G   GGGRGRGGGRGG 
Sbjct: 27  GRGGRGGFGGGRGGFGGGGRGRGGGGGGFRGRGGGGGRG---GGFQSGGGRGRGGGRGGK 86

Query: 66  -GMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRISVQNEDGTKIEYRV 125
            G + G  V+VEPHRHEG+FI +GKEDALVTKN+V GESVY EKR+S+ +E   KIEYR 
Sbjct: 87  RGNQSGKNVMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSI-SEGDDKIEYRA 146

Query: 126 WNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRS 185
           WNPFRSKLAAA+LGGVD I IKPGA+VLYLGAASGTTVSHVSD+VGP G+VYAVEFSHRS
Sbjct: 147 WNPFRSKLAAAILGGVDQIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRS 206

Query: 186 GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKA 245
           GRDL+N+AKKRTN+IP+IEDARHP KYRML+ MVDVIF+DVAQPDQ RI+ALNA  FL+ 
Sbjct: 207 GRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFADVAQPDQTRIVALNAHTFLRN 266

Query: 246 GGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAP 303
           GGHFVISIKANCIDST  AEAVFASEV K++ +  KP EQ+TLEP+ERDHA VVG+YR P
Sbjct: 267 GGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQEQLTLEPYERDHAVVVGVYRPP 326

[Close]
BLAST of MELO3C006945 vs. ExPASy TrEMBL
Match: A0A1S3AY25 (mediator of RNA polymerase II transcription subunit 36a-like OS=Cucumis melo OX=3656 GN=LOC103484122 PE=3 SV=1)

HSP 1 Score: 562.0 bits (1447), Expect = 1.5e-156
Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 0 

Query: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMQSRGGGRGGGRGRGGGRGGG 60
           MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMQSRGGGRGGGRGRGGGRGGG
Sbjct: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMQSRGGGRGGGRGRGGGRGGG 60

Query: 61  MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRISVQNEDGTKIEYRVWN 120
           MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRISVQNEDGTKIEYRVWN
Sbjct: 61  MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRISVQNEDGTKIEYRVWN 120

Query: 121 PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR 180
           PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR
Sbjct: 121 PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR 180

Query: 181 DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG 240
           DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG
Sbjct: 181 DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG 240

Query: 241 HFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK 300
           HFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK
Sbjct: 241 HFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK 300

Query: 301 QKAAAA 307
           QKAAAA
Sbjct: 301 QKAAAA 306

[Close]
BLAST of MELO3C006945 vs. ExPASy TrEMBL
Match: A0A6J1CHH3 (mediator of RNA polymerase II transcription subunit 36a-like OS=Momordica charantia OX=3673 GN=LOC111011688 PE=3 SV=1)

HSP 1 Score: 554.3 bits (1427), Expect = 3.2e-154
Identity = 300/305 (98.36%), Postives = 303/305 (99.34%), Query Frame = 0 

Query: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMQSRGGGRGGGRGRGGGRGGG 60
           MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGM SRGGGRGGGRGRGGGRGGG
Sbjct: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMASRGGGRGGGRGRGGGRGGG 60

Query: 61  MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRISVQNEDGTKIEYRVWN 120
           MKGGSKVV+EPHRHEGIFIAKGKEDALVTKNMV+GESVYNEKRISVQNEDGTK+EYRVWN
Sbjct: 61  MKGGSKVVIEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWN 120

Query: 121 PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR 180
           PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR
Sbjct: 121 PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR 180

Query: 181 DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG 240
           DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG
Sbjct: 181 DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG 240

Query: 241 HFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK 300
           HFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK
Sbjct: 241 HFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK 300

Query: 301 QKAAA 306
           QK AA
Sbjct: 301 QKPAA 305

[Close]
BLAST of MELO3C006945 vs. ExPASy TrEMBL
Match: A0A0A0L9V7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G183360 PE=3 SV=1)

HSP 1 Score: 553.1 bits (1424), Expect = 7.1e-154
Identity = 303/308 (98.38%), Postives = 305/308 (99.03%), Query Frame = 0 

Query: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMQSRGGGR--GGGRGRGGGRG 60
           MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGM SRGGGR  GGGRGRGGGRG
Sbjct: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMSSRGGGRGGGGGRGRGGGRG 60

Query: 61  GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRISVQNEDGTKIEYRV 120
           GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKR+SVQNEDGTKIEYRV
Sbjct: 61  GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRVSVQNEDGTKIEYRV 120

Query: 121 WNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRS 180
           WNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGP+GIVYAVEFSHRS
Sbjct: 121 WNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPSGIVYAVEFSHRS 180

Query: 181 GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKA 240
           GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKA
Sbjct: 181 GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKA 240

Query: 241 GGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAP 300
           GGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAP
Sbjct: 241 GGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAP 300

Query: 301 KKQKAAAA 307
           KKQKAAAA
Sbjct: 301 KKQKAAAA 308

[Close]
BLAST of MELO3C006945 vs. ExPASy TrEMBL
Match: A0A6J1JA27 (probable mediator of RNA polymerase II transcription subunit 36b OS=Cucurbita maxima OX=3661 GN=LOC111483086 PE=3 SV=1)

HSP 1 Score: 552.0 bits (1421), Expect = 1.6e-153
Identity = 302/305 (99.02%), Postives = 304/305 (99.67%), Query Frame = 0 

Query: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMQSRGGGRGGGRGRGGGRGGG 60
           MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGM SRGGGRGGGRGRGGGRGGG
Sbjct: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGM-SRGGGRGGGRGRGGGRGGG 60

Query: 61  MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRISVQNEDGTKIEYRVWN 120
           MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMV+GESVYNEKRISVQNEDGTK+EYRVWN
Sbjct: 61  MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWN 120

Query: 121 PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR 180
           PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR
Sbjct: 121 PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR 180

Query: 181 DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG 240
           DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG
Sbjct: 181 DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG 240

Query: 241 HFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK 300
           HFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK
Sbjct: 241 HFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK 300

Query: 301 QKAAA 306
           QKAAA
Sbjct: 301 QKAAA 304

[Close]
BLAST of MELO3C006945 vs. ExPASy TrEMBL
Match: A0A6J1E4P7 (probable mediator of RNA polymerase II transcription subunit 36b OS=Cucurbita moschata OX=3662 GN=LOC111430753 PE=3 SV=1)

HSP 1 Score: 550.8 bits (1418), Expect = 3.5e-153
Identity = 301/305 (98.69%), Postives = 304/305 (99.67%), Query Frame = 0 

Query: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMQSRGGGRGGGRGRGGGRGGG 60
           MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGM SRGGGRGGGRGRGGGRGGG
Sbjct: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGM-SRGGGRGGGRGRGGGRGGG 60

Query: 61  MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRISVQNEDGTKIEYRVWN 120
           MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMV+GESVYNEKRI+VQNEDGTK+EYRVWN
Sbjct: 61  MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRIAVQNEDGTKVEYRVWN 120

Query: 121 PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR 180
           PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR
Sbjct: 121 PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR 180

Query: 181 DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG 240
           DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG
Sbjct: 181 DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG 240

Query: 241 HFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK 300
           HFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK
Sbjct: 241 HFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK 300

Query: 301 QKAAA 306
           QKAAA
Sbjct: 301 QKAAA 304

[Close]
BLAST of MELO3C006945 vs. TAIR 10
Match: AT4G25630.1 (fibrillarin 2 )

HSP 1 Score: 448.0 bits (1151), Expect = 6.2e-126
Identity = 263/319 (82.45%), Postives = 275/319 (86.21%), Query Frame = 0 

Query: 1   MRPPRGRGGGGGFRGRGDGG-RGGRGRGG-GGGRGG---GGGRGMQSRGG-GRGGGRGRG 60
           MRPP    GGG   GRG GG  GGRG GG  GGRGG   GGGRG   RGG GRG G  RG
Sbjct: 1   MRPPLTGSGGGFSGGRGRGGYSGGRGDGGFSGGRGGGGRGGGRGFSDRGGRGRGRGPPRG 60

Query: 61  GGRG-------GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRISVQ 120
           G RG       GGMKGGSKV+VEPHRH G+FIAKGKEDALVTKN+V GE+VYNEKRISVQ
Sbjct: 61  GARGGRGPAGRGGMKGGSKVIVEPHRHAGVFIAKGKEDALVTKNLVPGEAVYNEKRISVQ 120

Query: 121 NEDGTKIEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTG 180
           NEDGTK EYRVWNPFRSKLAAA+LGGVD+IWIKPGA+VLYLGAASGTTVSHVSD+VGP G
Sbjct: 121 NEDGTKTEYRVWNPFRSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDLVGPEG 180

Query: 181 IVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARI 240
            VYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARI
Sbjct: 181 CVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARI 240

Query: 241 LALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERD 300
           LALNASYFLK+GGHFVISIKANCIDSTVPAEAVF +EV KL+ +QFKP EQVTLEPFERD
Sbjct: 241 LALNASYFLKSGGHFVISIKANCIDSTVPAEAVFQTEVKKLQQEQFKPAEQVTLEPFERD 300

Query: 301 HACVVGIYRAPKKQKAAAA 307
           HACVVG YR PKK KAA A
Sbjct: 301 HACVVGGYRMPKKPKAATA 319

[Close]
BLAST of MELO3C006945 vs. TAIR 10
Match: AT5G52470.1 (fibrillarin 1 )

HSP 1 Score: 446.8 bits (1148), Expect = 1.4e-125
Identity = 257/312 (82.37%), Postives = 270/312 (86.54%), Query Frame = 0 

Query: 1   MRPP-RGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRG-----MQSRGGGRGGGRGRG 60
           MRPP  G  GGGGFR    GGR G GRG GGGR  GGGR         RG GRG  RGRG
Sbjct: 1   MRPPVTGGRGGGGFR----GGRDGGGRGFGGGRSFGGGRSGDRGRSGPRGRGRGAPRGRG 60

Query: 61  GGRGGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRISVQNEDGTKI 120
           G   GGMKGGSKV+VEPHRH G+FIAKGKEDALVTKN+V GE+VYNEKRISVQNEDGTK+
Sbjct: 61  GPPRGGMKGGSKVIVEPHRHAGVFIAKGKEDALVTKNLVPGEAVYNEKRISVQNEDGTKV 120

Query: 121 EYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEF 180
           EYRVWNPFRSKLAAA+LGGVD+IWIKPGA+VLYLGAASGTTVSHVSD+VGP G VYAVEF
Sbjct: 121 EYRVWNPFRSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEF 180

Query: 181 SHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASY 240
           SHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNAS+
Sbjct: 181 SHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASF 240

Query: 241 FLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGI 300
           FLK GGHFVISIKANCIDSTV AEAVF SEV KL+ +QFKP EQVTLEPFERDHACVVG 
Sbjct: 241 FLKTGGHFVISIKANCIDSTVAAEAVFQSEVKKLQQEQFKPAEQVTLEPFERDHACVVGG 300

Query: 301 YRAPKKQKAAAA 307
           YR PKKQK  A+
Sbjct: 301 YRMPKKQKTPAS 308

[Close]
BLAST of MELO3C006945 vs. TAIR 10
Match: AT5G52490.1 (Fibrillarin family protein )

HSP 1 Score: 344.0 bits (881), Expect = 1.3e-94
Identity = 199/307 (64.82%), Postives = 231/307 (75.24%), Query Frame = 0 

Query: 1   MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMQSRGGGRGG--GRGRGGGR- 60
           M+PP+        RGRG G RGGRG          GG G   RG GRGG  GRGRG GR 
Sbjct: 1   MKPPQ--------RGRGGGVRGGRGL-------ARGGEGSAVRGSGRGGESGRGRGPGRV 60

Query: 61  ----GGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRISVQNEDGTK 120
                GG+KGGSKV+V PHRH G+F+AK K DALVTKN+V GE +YNEKRI VQNED + 
Sbjct: 61  KSESDGGIKGGSKVLVTPHRHAGVFVAKSKADALVTKNLVPGEIIYNEKRIFVQNEDRST 120

Query: 121 IEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVE 180
           +EYRVWNP RSKLA A+  GVD+IWIKPG +VLYLGA+SG TVSHVSD+VGP G VYAVE
Sbjct: 121 VEYRVWNPHRSKLADAITTGVDNIWIKPGVKVLYLGASSGYTVSHVSDIVGPEGCVYAVE 180

Query: 181 FSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNAS 240
            S   G+ L+NMA+KRTNVIPIIEDARHPAKYRMLVGMVD+IFSDV  P+QA IL+LNAS
Sbjct: 181 HSDICGKVLMNMAEKRTNVIPIIEDARHPAKYRMLVGMVDIIFSDVNHPEQANILSLNAS 240

Query: 241 YFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVG 300
           YFLK+GGHF+ISIKAN IDST+ AE V+  EV KL+ ++ +PTE + L+  E  HACV G
Sbjct: 241 YFLKSGGHFMISIKANSIDSTIAAETVYQMEVEKLQMEELRPTEILHLDSCEEKHACVFG 292

[Close]
BLAST of MELO3C006945 vs. TAIR 10
Match: AT5G52470.2 (fibrillarin 1 )

HSP 1 Score: 315.5 bits (807), Expect = 4.8e-86
Identity = 189/230 (82.17%), Postives = 198/230 (86.09%), Query Frame = 0 

Query: 1   MRPP-RGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRG-----MQSRGGGRGGGRGRG 60
           MRPP  G  GGGGFR    GGR G GRG GGGR  GGGR         RG GRG  RGRG
Sbjct: 1   MRPPVTGGRGGGGFR----GGRDGGGRGFGGGRSFGGGRSGDRGRSGPRGRGRGAPRGRG 60

Query: 61  GGRGGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRISVQNEDGTKI 120
           G   GGMKGGSKV+VEPHRH G+FIAKGKEDALVTKN+V GE+VYNEKRISVQNEDGTK+
Sbjct: 61  GPPRGGMKGGSKVIVEPHRHAGVFIAKGKEDALVTKNLVPGEAVYNEKRISVQNEDGTKV 120

Query: 121 EYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEF 180
           EYRVWNPFRSKLAAA+LGGVD+IWIKPGA+VLYLGAASGTTVSHVSD+VGP G VYAVEF
Sbjct: 121 EYRVWNPFRSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEF 180

Query: 181 SHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQ 225
           SHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQ
Sbjct: 181 SHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQ 226

The following BLAST results are available for this feature:
BLAST of MELO3C006945 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008439295.13.2e-156100.00PREDICTED: mediator of RNA polymerase II transcription subunit 36a-like [Cucumis... [more]
XP_023552409.11.3e-15499.02mediator of RNA polymerase II transcription subunit 36a-like [Cucurbita pepo sub... [more]
XP_022141240.16.6e-15498.36mediator of RNA polymerase II transcription subunit 36a-like [Momordica charanti... [more]
XP_004140765.11.5e-15398.38mediator of RNA polymerase II transcription subunit 36a [Cucumis sativus][more]
XP_022984980.13.3e-15399.02probable mediator of RNA polymerase II transcription subunit 36b [Cucurbita maxi... [more]
BLAST of MELO3C006945 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q94AH98.7e-12582.45rRNA 2'-O-methyltransferase fibrillarin 2 OS=Arabidopsis thaliana OX=3702 GN=FIB... [more]
Q9FEF81.9e-12482.37rRNA 2'-O-methyltransferase fibrillarin 1 OS=Arabidopsis thaliana OX=3702 GN=FIB... [more]
Q8I1F47.9e-11075.24rRNA 2'-O-methyltransferase fibrillarin OS=Drosophila erecta OX=7220 GN=Fib PE=3... [more]
Q9W1V38.8e-10974.59rRNA 2'-O-methyltransferase fibrillarin OS=Drosophila melanogaster OX=7227 GN=Fi... [more]
P225094.8e-10774.67rRNA 2'-O-methyltransferase fibrillarin OS=Rattus norvegicus OX=10116 GN=Fbl PE=... [more]
BLAST of MELO3C006945 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3AY251.5e-156100.00mediator of RNA polymerase II transcription subunit 36a-like OS=Cucumis melo OX=... [more]
A0A6J1CHH33.2e-15498.36mediator of RNA polymerase II transcription subunit 36a-like OS=Momordica charan... [more]
A0A0A0L9V77.1e-15498.38Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G183360 PE=3 SV=1[more]
A0A6J1JA271.6e-15399.02probable mediator of RNA polymerase II transcription subunit 36b OS=Cucurbita ma... [more]
A0A6J1E4P73.5e-15398.69probable mediator of RNA polymerase II transcription subunit 36b OS=Cucurbita mo... [more]
BLAST of MELO3C006945 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G25630.16.2e-12682.45fibrillarin 2 [more]
AT5G52470.11.4e-12582.37fibrillarin 1 [more]
AT5G52490.11.3e-9464.82Fibrillarin family protein [more]
AT5G52470.24.8e-8682.17fibrillarin 1 [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000692FibrillarinPRINTSPR00052FIBRILLARINcoord: 192..221
score: 70.24
coord: 222..251
score: 67.62
coord: 115..134
score: 75.71
coord: 142..163
score: 79.22
coord: 87..106
score: 64.29
coord: 274..295
score: 61.36
coord: 167..184
score: 72.22
IPR000692FibrillarinSMARTSM01206Fibrillarin_2coord: 69..297
e-value: 1.3E-172
score: 589.4
IPR000692FibrillarinPIRSFPIRSF006540Nop17pcoord: 19..299
e-value: 3.3E-121
score: 401.3
IPR000692FibrillarinPFAMPF01269Fibrillarincoord: 69..296
e-value: 1.2E-109
score: 364.8
IPR000692FibrillarinHAMAPMF_00351RNA_methyltransf_FlpAcoord: 83..296
score: 36.905724
NoneNo IPR availableGENE3D3.40.50.150Vaccinia Virus protein VP39coord: 120..297
e-value: 1.6E-88
score: 296.9
NoneNo IPR availableGENE3D3.30.200.20Phosphorylase Kinase; domain 1coord: 64..119
e-value: 1.4E-29
score: 103.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..66
NoneNo IPR availablePANTHERPTHR10335RRNA 2-O-METHYLTRANSFERASE FIBRILLARINcoord: 4..304
NoneNo IPR availablePANTHERPTHR10335:SF22FIBRILLARIN, S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATEDcoord: 4..304
IPR020813Fibrillarin, conserved sitePROSITEPS00566FIBRILLARINcoord: 167..181
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 67..295

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C006945.1MELO3C006945.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006364 rRNA processing
molecular_function GO:0008168 methyltransferase activity
molecular_function GO:0003723 RNA binding