MELO3C006881 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTGCGGATCATACATCCTAAGCCTCGAGATACGAAAAGATTTTTACGAACTTATGCTTATTTCTTGATGATTGTGTCCAGTTCAATAAGCGTTATATTTTACTGAACGACTTTATGTTAAGTTGGTTTCGCTTATTGTTGGCAATTACACGTTTTCTTCATTAGTTAAAAAGGAACTCTGCTAACCTTCATCTTTATTATGAATTACTGTGTCTGAAAATTAAACATTGTGTGTTGAGGGATTTCTAAAAAGCTTTCCCGTTAGTAGTTTATTTAATCTGGGTACCCCTCTTGCTGTATATGTATCTTTAGATCCTCGTTAGCAACATCCAAAACTTACTTATTATTATCAGTTCTTCAAAGTTCAAAGTACTAAGTAGCCTTTTATTCACTTTGTACCCTGTTTCAGATGCCCTTTGTTAATTTGCATGAAGGACTCTGCCCTACTTCTAGTATACAGTTAGTTCATCAGTTTCTGTATCAACTTTATTTTAATTTTAATTTTTTAAAATTATCTGTTAGTTTGAATTTTGACTGTTTATAGTGTTTTGCATTACATTTTCCAAGTTCTTCCTTATTTGGGTTAATAATAAGTCTTGTTAGTTATGCAAAATATACACAATGAAAGCAGATAAATGGAGTATGGTTGTAAAAGTCTATACATGAGGACTTGAAACCCAACTCTTGGATCCACTCATAACAGTTTGTTATTTGAAGTAAATATACTAAAATTGCATTCTTAACTGTAGTTTGACCACACTGGTATTTATATTGTTTTGTGAAAGGTCTTCATATTTTCATTTTGGAATATTGGATGGTTCCAATATTTTTCCGCTCCTACGTTTATAAGTGATCTTATTCTGCAGATATGAAGATGAGCCACCAGAACCTGAGATTGAGGTAAGAAAAAATTAGTTCAATTTCATTTGAAAGAAAGTATTTTCTTTTTTAAGTTGATTGATCATAGTGACACTGAGAAGTGAGAATCATATACAGGAAGGTGCTGAAGAAGAATTGGATAATACTAACAATGATGATATTACTGGTGAACCTGTTGAAGCTGAGGAAAAGGAAGATGAAGAACCTGTTGAACGTGCGCGTAAAACCTCAAAATTTATGACAAAATATGAACGTGCTAGGATTTTGGGTACACGTGCCCTCCAAATCAGGTTCCCTTTTTAAAATTGGCCACATCCATTATGTGCGCCTAGTTGATAAATAATATGATGATTGTTTTTTCTTTTGGGCAGCATGAATGCTCCTGTGATGGTCGAGTTGGAGGGTGAGACTGATCCACTTGAGGTTAGATACTCAATTATTAAGCTAAAACCTTTGAAAGTTCTCTTTGTTTTTAGCATTCAGCTGAATGTATTTTTGTTTGTGCATGATAGTTAGAATGCCTGCTCGATATAAATATGGTTAAATTTATATCGTATAAGAGTACCCTCAAACTTTGAGGTCGGGGGTGAAATTAAAGGCTTTCAAACAATACAGTGTAATTGAAACTGACGTCAAAGCTTATGAAATTCGTATGATGATTGTCTACGCTTTCACCTGCCATTCATATTCATGGGTTTGTAATAGCTTCCGCTTTTATAAGGAATGAAGATGTATGCTTGTCTGCCTGGGTGCTTTGCATTCTTTTGGTTGGCTGTAGCATTGTTCTCTGGCATCTTATCTAATCTTGTACTGTCTTAGATTGCAATGAAGGAACTTCGTGAGCGGAAGATACCCTTCACCATTCGTCGCTACCTGCCAGATGGAAGGTTGAGCCTCTTAGATCTTATTCTTTCATATTTAACATTCGGATTGACCCGCCGGCAGAAACGTGTAGAAAACTGACAATATGCGAAGCAGTCGGTTTGGTGCTTTATGTATATGTATAGGTTTAGAGATATCAACTATACTGAGTATAGTTGGTCGTCTTAGTCTTAGAGTGTGTTTGAATTATCTATGAAATAAAATGTTTTTCAAAAATAAATTTTCTTTTGAACACTTTCTTTAAAATGAGTTTAAAATTTAAACACTTACACGTTTGATTAAATCTTTTTATAATTGTTTATATACATAATTTTGTTTAAAAAACTATTTTCTCAAAATTTGGTTCTTAGTGTTGTCTTTAAAGTGCATTATTTTTTAAAATGCATTTTGAAGAGTTACCAAACATCTCAAATTTTTTAAAAATAATTTTCTTTAAAATTTAAACAAGGTATTAGAGTTAGAGAAAAATAAGTATGAGGTTTTGGAAGCAACTTTTCTAGTTCTCTGTAGCGTTAAATTATTGAAACTCTGTTGGTTTTCGGCAGTTATGAAGACTGGGGCGTCGATGAACTGATAGTGGAAGACTCTTGGAAGAGGCAAGTTGGCGGCGCTTGATTAATCTGTGTTTGTTGTTACCAAATGTGAAATACTAGCGATTGGAACAAGAAGTTCCCATTTATGCAGTAGTGAAAAGGAAAACAGGACTACTGTTGTTTGTACTCATAATTCTCCTCTGTGATATATTGGAAAGGAACCTCTGTTAATGTATTGACTGGCGTTATTTTAACGACATTAAATATAAATACTAGAACGGATCTAATGAAAATAGAGTTGAATTTTGTGTTT CTTGCGGATCATACATCCTAAGCCTCGAGATACGAAAAGATTTTTACGAACTTATGCTTATTTCTTGATGATTGTGTCCAGTTCAATAAGCGTTATATTTTACTGAACGACTTTATGTTAAGTTGGTTTCGCTTATTGTTGGCAATTACACGTTTTCTTCATTAGTTAAAAAGGAACTCTGCTAACCTTCATCTTTATTATGAATTACTGTGTCTGAAAATTAAACATTGTGTGTTGAGGGATTTCTAAAAAGCTTTCCCGTTAGTAGTTTATTTAATCTGGGTACCCCTCTTGCTGTATATGTATCTTTAGATCCTCGTTAGCAACATCCAAAACTTACTTATTATTATCAGTTCTTCAAAGTTCAAAGTACTAAGTAGCCTTTTATTCACTTTGTACCCTGTTTCAGATGCCCTTTGTTAATTTGCATGAAGGACTCTGCCCTACTTCTAGTATACAATATGAAGATGAGCCACCAGAACCTGAGATTGAGGAAGGTGCTGAAGAAGAATTGGATAATACTAACAATGATGATATTACTGGTGAACCTGTTGAAGCTGAGGAAAAGGAAGATGAAGAACCTGTTGAACGTGCGCGTAAAACCTCAAAATTTATGACAAAATATGAACGTGCTAGGATTTTGGGTACACGTGCCCTCCAAATCAGCATGAATGCTCCTGTGATGGTCGAGTTGGAGGGTGAGACTGATCCACTTGAGATTGCAATGAAGGAACTTCGTGAGCGGAAGATACCCTTCACCATTCGTCGCTACCTGCCAGATGGAAGTTATGAAGACTGGGGCGTCGATGAACTGATAGTGGAAGACTCTTGGAAGAGGCAAGTTGGCGGCGCTTGATTAATCTGTGTTTGTTGTTACCAAATGTGAAATACTAGCGATTGGAACAAGAAGTTCCCATTTATGCAGTAGTGAAAAGGAAAACAGGACTACTGTTGTTTGTACTCATAATTCTCCTCTGTGATATATTGGAAAGGAACCTCTGTTAATGTATTGACTGGCGTTATTTTAACGACATTAAATATAAATACTAGAACGGATCTAATGAAAATAGAGTTGAATTTTGTGTTT ATGCCCTTTGTTAATTTGCATGAAGGACTCTGCCCTACTTCTAGTATACAATATGAAGATGAGCCACCAGAACCTGAGATTGAGGAAGGTGCTGAAGAAGAATTGGATAATACTAACAATGATGATATTACTGGTGAACCTGTTGAAGCTGAGGAAAAGGAAGATGAAGAACCTGTTGAACGTGCGCGTAAAACCTCAAAATTTATGACAAAATATGAACGTGCTAGGATTTTGGGTACACGTGCCCTCCAAATCAGCATGAATGCTCCTGTGATGGTCGAGTTGGAGGGTGAGACTGATCCACTTGAGATTGCAATGAAGGAACTTCGTGAGCGGAAGATACCCTTCACCATTCGTCGCTACCTGCCAGATGGAAGTTATGAAGACTGGGGCGTCGATGAACTGATAGTGGAAGACTCTTGGAAGAGGCAAGTTGGCGGCGCTTGA MPFVNLHEGLCPTSSIQYEDEPPEPEIEEGAEEELDNTNNDDITGEPVEAEEKEDEEPVERARKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGA Homology
BLAST of MELO3C006881 vs. NCBI nr
Match: KAA0033618.1 (DNA-directed RNA polymerases II, IV and V subunit 6A [Cucumis melo var. makuwa]) HSP 1 Score: 294.7 bits (753), Expect = 4.6e-76 Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0
BLAST of MELO3C006881 vs. NCBI nr
Match: TYK22284.1 (DNA-directed RNA polymerases II, IV and V subunit 6A [Cucumis melo var. makuwa]) HSP 1 Score: 290.0 bits (741), Expect = 1.1e-74 Identity = 145/148 (97.97%), Postives = 146/148 (98.65%), Query Frame = 0
BLAST of MELO3C006881 vs. NCBI nr
Match: XP_008439178.1 (PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 6A [Cucumis melo]) HSP 1 Score: 257.3 bits (656), Expect = 8.1e-65 Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0
BLAST of MELO3C006881 vs. NCBI nr
Match: XP_022141284.1 (DNA-directed RNA polymerases II, IV and V subunit 6A [Momordica charantia]) HSP 1 Score: 250.0 bits (637), Expect = 1.3e-62 Identity = 126/131 (96.18%), Postives = 128/131 (97.71%), Query Frame = 0
BLAST of MELO3C006881 vs. NCBI nr
Match: XP_022923151.1 (DNA-directed RNA polymerases II, IV and V subunit 6A-like [Cucurbita moschata] >XP_022984652.1 DNA-directed RNA polymerases II, IV and V subunit 6A-like [Cucurbita maxima] >XP_022984654.1 DNA-directed RNA polymerases II, IV and V subunit 6A-like [Cucurbita maxima] >XP_023551729.1 DNA-directed RNA polymerases II, IV and V subunit 6A-like [Cucurbita pepo subsp. pepo] >KAG6576740.1 DNA-directed RNA polymerases II, IV and V subunit 6A, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014784.1 DNA-directed RNA polymerases II, IV and V subunit 6A [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 249.2 bits (635), Expect = 2.2e-62 Identity = 125/131 (95.42%), Postives = 128/131 (97.71%), Query Frame = 0
BLAST of MELO3C006881 vs. ExPASy Swiss-Prot
Match: Q9FJ98 (DNA-directed RNA polymerases II, IV and V subunit 6A OS=Arabidopsis thaliana OX=3702 GN=NRPB6A PE=1 SV=1) HSP 1 Score: 221.9 bits (564), Expect = 4.9e-57 Identity = 110/130 (84.62%), Postives = 121/130 (93.08%), Query Frame = 0
BLAST of MELO3C006881 vs. ExPASy Swiss-Prot
Match: Q9SJ96 (DNA-directed RNA polymerases II and V subunit 6B OS=Arabidopsis thaliana OX=3702 GN=NRPB6B PE=1 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 1.8e-54 Identity = 108/130 (83.08%), Postives = 117/130 (90.00%), Query Frame = 0
BLAST of MELO3C006881 vs. ExPASy Swiss-Prot
Match: P61219 (DNA-directed RNA polymerases I, II, and III subunit RPABC2 OS=Mus musculus OX=10090 GN=Polr2f PE=2 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 1.3e-28 Identity = 73/115 (63.48%), Postives = 86/115 (74.78%), Query Frame = 0
BLAST of MELO3C006881 vs. ExPASy Swiss-Prot
Match: O88828 (DNA-directed RNA polymerases I, II, and III subunit RPABC2 OS=Rattus norvegicus OX=10116 GN=Polr2f PE=1 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 1.3e-28 Identity = 73/115 (63.48%), Postives = 86/115 (74.78%), Query Frame = 0
BLAST of MELO3C006881 vs. ExPASy Swiss-Prot
Match: P61217 (DNA-directed RNA polymerases I, II, and III subunit RPABC2 OS=Cricetulus griseus OX=10029 GN=POLR2F PE=2 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 1.7e-28 Identity = 73/115 (63.48%), Postives = 86/115 (74.78%), Query Frame = 0
BLAST of MELO3C006881 vs. ExPASy TrEMBL
Match: A0A5A7SSQ6 (DNA-directed RNA polymerases II, IV and V subunit 6A OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold239G00540 PE=3 SV=1) HSP 1 Score: 294.7 bits (753), Expect = 2.2e-76 Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0
BLAST of MELO3C006881 vs. ExPASy TrEMBL
Match: A0A5D3DFB9 (DNA-directed RNA polymerases II, IV and V subunit 6A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold440G00400 PE=3 SV=1) HSP 1 Score: 290.0 bits (741), Expect = 5.4e-75 Identity = 145/148 (97.97%), Postives = 146/148 (98.65%), Query Frame = 0
BLAST of MELO3C006881 vs. ExPASy TrEMBL
Match: A0A1S3AXR1 (DNA-directed RNA polymerases II, IV and V subunit 6A OS=Cucumis melo OX=3656 GN=LOC103484050 PE=3 SV=1) HSP 1 Score: 257.3 bits (656), Expect = 3.9e-65 Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0
BLAST of MELO3C006881 vs. ExPASy TrEMBL
Match: A0A6J1CI61 (DNA-directed RNA polymerases II, IV and V subunit 6A OS=Momordica charantia OX=3673 GN=LOC111011721 PE=3 SV=1) HSP 1 Score: 250.0 bits (637), Expect = 6.2e-63 Identity = 126/131 (96.18%), Postives = 128/131 (97.71%), Query Frame = 0
BLAST of MELO3C006881 vs. ExPASy TrEMBL
Match: A0A6J1J2R7 (DNA-directed RNA polymerases II, IV and V subunit 6A-like OS=Cucurbita maxima OX=3661 GN=LOC111482872 PE=3 SV=1) HSP 1 Score: 249.2 bits (635), Expect = 1.1e-62 Identity = 125/131 (95.42%), Postives = 128/131 (97.71%), Query Frame = 0
BLAST of MELO3C006881 vs. TAIR 10
Match: AT5G51940.1 (RNA polymerase Rpb6 ) HSP 1 Score: 221.9 bits (564), Expect = 3.5e-58 Identity = 110/130 (84.62%), Postives = 121/130 (93.08%), Query Frame = 0
BLAST of MELO3C006881 vs. TAIR 10
Match: AT2G04630.1 (RNA polymerase Rpb6 ) HSP 1 Score: 213.4 bits (542), Expect = 1.2e-55 Identity = 108/130 (83.08%), Postives = 117/130 (90.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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