Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ACTCTTCAAATCAAATTCGGGAGTTTCGTTTGATTCTTGTTCGATTTTCTTCATCCTTTCCCTCTTTTTCCATACTCAAGCTCGTCACAAGCCACCAAGAGGAGCCGCCGGAGGAGGTAATAGATCTTTTATCTTGAATCCTTTTCATACTTAGTCACATATTCCGCTTCTTCGTGGACGAACTTCCCACGAGAAAGAGAACGATAAACCTGAAGGAACAGAAGGCAGAGATTAATGAGAATAATTAGAATAGACCCATTATGGCTGTATGAAATGGAATGATTGGGTGTGGGAGTCTTTAGTTGATCCAGCTTGAATTTATTAGTAACTTTCAATTTTATGTTTCAGCCGTAATAACTGTTTTCTTCCGTTTGATCCTTGTCTTTTTGACTCTTTGGTAGTTTCTCGTTGTAGCGAACTAATCATTTTAATGAATACAGAAGGTGTGTTAGTGAAACGGGCGGAAATGCCATCTCTACAGACTGCTCTACCTCCTGAGCTTGCTAATAATGTCATTAGGGTTGGTCCCCCTCCTATCCATTTTTTGCAATACAATTTTCTCCTCAAATTTTCTTAACTTTACATGTTTTATCATTGCAGCTTTACCGCGAGTGCCTTCGAAGGGCCAAGTTTGTTGGTCATCGGGTATGGATGTTCCCTTTGTTTTTTATTTTATCTAATCCAATGGCCCCATTCGAGTAATTTTGCATTTGAATAATTTAAAAAGGTTACTGATTCAATGAGAAGTGAAAAGTTAAAGTTTAATACTCCAGGTTAATTGCAATTATCCAATCAATGAGTTCATTCGTTTATTTCTTTATTTGCCATTTGGGTACTGTGCTGCATCAAGCCTATAGTTGAATTCGTGCAGGACATAACCTTACTGCAAAGCTATGTTCTCACTATTCATATCAATCAGTCAAAATATGACTATAGGAATTGAACAATCCACCGAAACATAGTATTTTGTATGTAAAAGCGCCTTTGCTACCTGCCTCCCATGATCATGTTTTAAGTATTTCCAGTGGCTAGGTTGTTGCGCTGGATGTAGAATGATTGCAGACTTGTTAATGGCAATGGAGTTTTAGATATTGGTACAACGAAAGACTATAGAGTTATTCTAAGAAGTTCATGTTTTGTTTCTACTAACGTCAAGATTTACTAGTCAAGAAATATACATTACAAGTAGATATTTCTTCACCTTATTTAATGCTAATAATGCTTATAAGTCAAGGACGCAGTTGTACAACCTATAGAATAGATCTTGTTCAAGTAAGGTCATTAATGCTAATAATTTTCTGTATAAAGTTCACAATATTAGGTGTAAAATGGAAATCCCTATTCATTTCACCCGCACTTCAAAGTTAGAAATGATTTGAAAATTAATTGACGCACTCCATCTTGTTGACTGTGATATTAGGTTTCCTCTTTCCTTGACTGTATCCTCTCTTTTTTGCTGAATTAGGTTATAGTTCTTATCTGTTTTGACTTAAAAAATTGTGCTCACATTTCAAATTAGTTGTACCCAGTTACAGGAAGGTGTAGAGGATTCGACATTGGTTCTTTGACACTTGTTAAACTTGAATCCTATCAACTTCTTGCAGCAACATAACACCGAGCTTATTGTCGATATGGTGAGGCAACAATTCAAAAAGAACATGCATGAGACTGACCCAGAGAAGATTCAGAAGATGAAAGATGAGTATGTCTTATGATTGCCTTTTTTCCCTTGTTTCGTTCCTTCTCTTTTTCCACACTCTCTTTCGCAGCCGGAAGTCATACTAAAAAGAAATTTGTAGAAGAATACAAGTAGGAAAGGCATCCGATCAAACCCAAAGTGAAGAGACCACATTTATATTTTCTGATTAGAACTTGTGTGGGTATGGCCCTCACATTTCTGTGTATATAATTGTTTGTTTGCAGGGCTGCTAGGGGACTTATAAACCATATGCTATACGAACATGAGAGAATGTCAGGTCAAAAATTGAGCCAAAGTTCTTGATGTTATATCGAAAATGACATTGAGTGAAAGTTCACCATTGGAACTTCAGTCAGACATTGTAGGAATAAGATGGCTAATGATGAAAGTACTCCTCGGAGGTTGTTTTTGCGTTTCCTTGTTTATTTCTACTATTTGTTCGAAGAAATCGTCAAATTCTACGGTAGTTGGTGAACGTTTTTCCATCTACAATCTACATTTTATTGCGGAAAGTGGATGTCCAAGGAAGATATGGCATATTGCACATCTCTGATGTCGGGTTCTCTTTTTTAGTGTCTGTTGGTTTCGTGCACTTTGACTATTTTCGTGGAATTTTTTACTACACTCACCTAGTTGTTAAGGTAACTTAGACTATTATATCTTGTATGGATGGTTACTATGGTTTAAACTCGTTGTTTTTTAAGTTTTGTATGATTGGTATTTTTTTTTTTTATGAGATTTATTATGGTAATTGTTAATGGAAATCCAAGGAGAAGAATTGTCGCCTTT
mRNA sequence
ACTCTTCAAATCAAATTCGGGAGTTTCGTTTGATTCTTGTTCGATTTTCTTCATCCTTTCCCTCTTTTTCCATACTCAAGCTCGTCACAAGCCACCAAGAGGAGCCGCCGGAGGAGAAGGTGTGTTAGTGAAACGGGCGGAAATGCCATCTCTACAGACTGCTCTACCTCCTGAGCTTGCTAATAATGTCATTAGGCTTTACCGCGAGTGCCTTCGAAGGGCCAAGTTTGTTGGTCATCGGCAACATAACACCGAGCTTATTGTCGATATGGTGAGGCAACAATTCAAAAAGAACATGCATGAGACTGACCCAGAGAAGATTCAGAAGATGAAAGATGAGGCTGCTAGGGGACTTATAAACCATATGCTATACGAACATGAGAGAATGTCAGGTCAAAAATTGAGCCAAAGTTCTTGATGTTATATCGAAAATGACATTGAGTGAAAGTTCACCATTGGAACTTCAGTCAGACATTGTAGGAATAAGATGGCTAATGATGAAAGTACTCCTCGGAGGTTGTTTTTGCGTTTCCTTGTTTATTTCTACTATTTGTTCGAAGAAATCGTCAAATTCTACGGTAGTTGGTGAACGTTTTTCCATCTACAATCTACATTTTATTGCGGAAAGTGGATGTCCAAGGAAGATATGGCATATTGCACATCTCTGATGTCGGGTTCTCTTTTTTAGTGTCTGTTGGTTTCGTGCACTTTGACTATTTTCGTGGAATTTTTTACTACACTCACCTAGTTGTTAAGGTAACTTAGACTATTATATCTTGTATGGATGGTTACTATGGTTTAAACTCGTTGTTTTTTAAGTTTTGTATGATTGGTATTTTTTTTTTTTATGAGATTTATTATGGTAATTGTTAATGGAAATCCAAGGAGAAGAATTGTCGCCTTT
Coding sequence (CDS)
ATGCCATCTCTACAGACTGCTCTACCTCCTGAGCTTGCTAATAATGTCATTAGGCTTTACCGCGAGTGCCTTCGAAGGGCCAAGTTTGTTGGTCATCGGCAACATAACACCGAGCTTATTGTCGATATGGTGAGGCAACAATTCAAAAAGAACATGCATGAGACTGACCCAGAGAAGATTCAGAAGATGAAAGATGAGGCTGCTAGGGGACTTATAAACCATATGCTATACGAACATGAGAGAATGTCAGGTCAAAAATTGAGCCAAAGTTCTTGA
Protein sequence
MPSLQTALPPELANNVIRLYRECLRRAKFVGHRQHNTELIVDMVRQQFKKNMHETDPEKIQKMKDEAARGLINHMLYEHERMSGQKLSQSS
Homology
BLAST of MELO3C006742.jh1 vs. NCBI nr
Match:
XP_008438986.1 (PREDICTED: uncharacterized protein LOC103483919 [Cucumis melo] >XP_008438987.1 PREDICTED: uncharacterized protein LOC103483919 [Cucumis melo] >KAA0052166.1 Complex1_LYR domain-containing protein [Cucumis melo var. makuwa] >TYK05131.1 Complex1_LYR domain-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 180 bits (456), Expect = 6.42e-57
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0
Query: 1 MPSLQTALPPELANNVIRLYRECLRRAKFVGHRQHNTELIVDMVRQQFKKNMHETDPEKI 60
MPSLQTALPPELANNVIRLYRECLRRAKFVGHRQHNTELIVDMVRQQFKKNMHETDPEKI
Sbjct: 1 MPSLQTALPPELANNVIRLYRECLRRAKFVGHRQHNTELIVDMVRQQFKKNMHETDPEKI 60
Query: 61 QKMKDEAARGLINHMLYEHERMSGQKLSQSS 91
QKMKDEAARGLINHMLYEHERMSGQKLSQSS
Sbjct: 61 QKMKDEAARGLINHMLYEHERMSGQKLSQSS 91
BLAST of MELO3C006742.jh1 vs. NCBI nr
Match:
XP_004147626.1 (uncharacterized protein LOC101203751 [Cucumis sativus] >XP_011651093.1 uncharacterized protein LOC101203751 [Cucumis sativus] >KAE8650410.1 hypothetical protein Csa_010313 [Cucumis sativus])
HSP 1 Score: 174 bits (442), Expect = 8.79e-55
Identity = 87/91 (95.60%), Postives = 90/91 (98.90%), Query Frame = 0
Query: 1 MPSLQTALPPELANNVIRLYRECLRRAKFVGHRQHNTELIVDMVRQQFKKNMHETDPEKI 60
MPSLQTALPPELANNVIRLYRECLRRAKF+GHRQHNTELIVDMVRQQFKKNMHETDPEKI
Sbjct: 1 MPSLQTALPPELANNVIRLYRECLRRAKFLGHRQHNTELIVDMVRQQFKKNMHETDPEKI 60
Query: 61 QKMKDEAARGLINHMLYEHERMSGQKLSQSS 91
QKMKD+AARGLINHMLYEHERMSG+K SQSS
Sbjct: 61 QKMKDDAARGLINHMLYEHERMSGKKFSQSS 91
BLAST of MELO3C006742.jh1 vs. NCBI nr
Match:
XP_031490696.1 (uncharacterized protein LOC116257839 isoform X2 [Nymphaea colorata])
HSP 1 Score: 163 bits (412), Expect = 3.22e-50
Identity = 80/90 (88.89%), Postives = 87/90 (96.67%), Query Frame = 0
Query: 1 MPSLQTALPPELANNVIRLYRECLRRAKFVGHRQHNTELIVDMVRQQFKKNMHETDPEKI 60
MPSLQTALPP+LANNVIRLYRECLRRAKFVGHRQHN EL+VDMVRQQFKKNMHETDPEKI
Sbjct: 1 MPSLQTALPPDLANNVIRLYRECLRRAKFVGHRQHNVELVVDMVRQQFKKNMHETDPEKI 60
Query: 61 QKMKDEAARGLINHMLYEHERMSGQKLSQS 90
QKMKD+AARGLINHML+E ER+SG+K S+S
Sbjct: 61 QKMKDDAARGLINHMLFESERLSGRKFSKS 90
BLAST of MELO3C006742.jh1 vs. NCBI nr
Match:
XP_010270901.1 (PREDICTED: uncharacterized protein LOC104607091 isoform X2 [Nelumbo nucifera] >DAD38383.1 TPA_asm: hypothetical protein HUJ06_009024 [Nelumbo nucifera])
HSP 1 Score: 162 bits (411), Expect = 4.72e-50
Identity = 79/91 (86.81%), Postives = 88/91 (96.70%), Query Frame = 0
Query: 1 MPSLQTALPPELANNVIRLYRECLRRAKFVGHRQHNTELIVDMVRQQFKKNMHETDPEKI 60
MPSLQTALPPELANNVIRLYRECLRRA+F+GHRQHNTEL+VDMVRQQFKK+MHETDPEKI
Sbjct: 1 MPSLQTALPPELANNVIRLYRECLRRARFIGHRQHNTELVVDMVRQQFKKHMHETDPEKI 60
Query: 61 QKMKDEAARGLINHMLYEHERMSGQKLSQSS 91
QK+KD+AARGLINH+LYE E+MSG+K S SS
Sbjct: 61 QKLKDDAARGLINHILYESEKMSGRKFSSSS 91
BLAST of MELO3C006742.jh1 vs. NCBI nr
Match:
XP_022964695.1 (uncharacterized protein LOC111464671 [Cucurbita moschata])
HSP 1 Score: 162 bits (410), Expect = 6.71e-50
Identity = 78/91 (85.71%), Postives = 89/91 (97.80%), Query Frame = 0
Query: 1 MPSLQTALPPELANNVIRLYRECLRRAKFVGHRQHNTELIVDMVRQQFKKNMHETDPEKI 60
MPSLQTALPPELANNVIRLYRECLRRAKF+GHRQHNT+L+V MV+QQF+KNMHETDPEKI
Sbjct: 1 MPSLQTALPPELANNVIRLYRECLRRAKFIGHRQHNTDLVVSMVKQQFRKNMHETDPEKI 60
Query: 61 QKMKDEAARGLINHMLYEHERMSGQKLSQSS 91
QK+KD+AARGLINH+LYE ER++G+KLSQSS
Sbjct: 61 QKLKDDAARGLINHILYESERLTGRKLSQSS 91
BLAST of MELO3C006742.jh1 vs. ExPASy TrEMBL
Match:
A0A1S3AYB1 (uncharacterized protein LOC103483919 OS=Cucumis melo OX=3656 GN=LOC103483919 PE=4 SV=1)
HSP 1 Score: 180 bits (456), Expect = 3.11e-57
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0
Query: 1 MPSLQTALPPELANNVIRLYRECLRRAKFVGHRQHNTELIVDMVRQQFKKNMHETDPEKI 60
MPSLQTALPPELANNVIRLYRECLRRAKFVGHRQHNTELIVDMVRQQFKKNMHETDPEKI
Sbjct: 1 MPSLQTALPPELANNVIRLYRECLRRAKFVGHRQHNTELIVDMVRQQFKKNMHETDPEKI 60
Query: 61 QKMKDEAARGLINHMLYEHERMSGQKLSQSS 91
QKMKDEAARGLINHMLYEHERMSGQKLSQSS
Sbjct: 61 QKMKDEAARGLINHMLYEHERMSGQKLSQSS 91
BLAST of MELO3C006742.jh1 vs. ExPASy TrEMBL
Match:
A0A5A7UD86 (Complex1_LYR domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1769G00350 PE=4 SV=1)
HSP 1 Score: 180 bits (456), Expect = 3.11e-57
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0
Query: 1 MPSLQTALPPELANNVIRLYRECLRRAKFVGHRQHNTELIVDMVRQQFKKNMHETDPEKI 60
MPSLQTALPPELANNVIRLYRECLRRAKFVGHRQHNTELIVDMVRQQFKKNMHETDPEKI
Sbjct: 1 MPSLQTALPPELANNVIRLYRECLRRAKFVGHRQHNTELIVDMVRQQFKKNMHETDPEKI 60
Query: 61 QKMKDEAARGLINHMLYEHERMSGQKLSQSS 91
QKMKDEAARGLINHMLYEHERMSGQKLSQSS
Sbjct: 61 QKMKDEAARGLINHMLYEHERMSGQKLSQSS 91
BLAST of MELO3C006742.jh1 vs. ExPASy TrEMBL
Match:
A0A0A0L5F6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G171030 PE=4 SV=1)
HSP 1 Score: 166 bits (421), Expect = 8.88e-51
Identity = 83/90 (92.22%), Postives = 87/90 (96.67%), Query Frame = 0
Query: 2 PSLQTALPPELANNVIRLYRECLRRAKFVGHRQHNTELIVDMVRQQFKKNMHETDPEKIQ 61
P +TALPPELANNVIRLYRECLRRAKF+GHRQHNTELIVDMVRQQFKKNMHETDPEKIQ
Sbjct: 84 PREKTALPPELANNVIRLYRECLRRAKFLGHRQHNTELIVDMVRQQFKKNMHETDPEKIQ 143
Query: 62 KMKDEAARGLINHMLYEHERMSGQKLSQSS 91
KMKD+AARGLINHMLYEHERMSG+K SQSS
Sbjct: 144 KMKDDAARGLINHMLYEHERMSGKKFSQSS 173
BLAST of MELO3C006742.jh1 vs. ExPASy TrEMBL
Match:
A0A1U8AWB6 (uncharacterized protein LOC104607091 isoform X2 OS=Nelumbo nucifera OX=4432 GN=LOC104607091 PE=4 SV=1)
HSP 1 Score: 162 bits (411), Expect = 2.29e-50
Identity = 79/91 (86.81%), Postives = 88/91 (96.70%), Query Frame = 0
Query: 1 MPSLQTALPPELANNVIRLYRECLRRAKFVGHRQHNTELIVDMVRQQFKKNMHETDPEKI 60
MPSLQTALPPELANNVIRLYRECLRRA+F+GHRQHNTEL+VDMVRQQFKK+MHETDPEKI
Sbjct: 1 MPSLQTALPPELANNVIRLYRECLRRARFIGHRQHNTELVVDMVRQQFKKHMHETDPEKI 60
Query: 61 QKMKDEAARGLINHMLYEHERMSGQKLSQSS 91
QK+KD+AARGLINH+LYE E+MSG+K S SS
Sbjct: 61 QKLKDDAARGLINHILYESEKMSGRKFSSSS 91
BLAST of MELO3C006742.jh1 vs. ExPASy TrEMBL
Match:
A0A6J1HLJ6 (uncharacterized protein LOC111464671 OS=Cucurbita moschata OX=3662 GN=LOC111464671 PE=4 SV=1)
HSP 1 Score: 162 bits (410), Expect = 3.25e-50
Identity = 78/91 (85.71%), Postives = 89/91 (97.80%), Query Frame = 0
Query: 1 MPSLQTALPPELANNVIRLYRECLRRAKFVGHRQHNTELIVDMVRQQFKKNMHETDPEKI 60
MPSLQTALPPELANNVIRLYRECLRRAKF+GHRQHNT+L+V MV+QQF+KNMHETDPEKI
Sbjct: 1 MPSLQTALPPELANNVIRLYRECLRRAKFIGHRQHNTDLVVSMVKQQFRKNMHETDPEKI 60
Query: 61 QKMKDEAARGLINHMLYEHERMSGQKLSQSS 91
QK+KD+AARGLINH+LYE ER++G+KLSQSS
Sbjct: 61 QKLKDDAARGLINHILYESERLTGRKLSQSS 91
BLAST of MELO3C006742.jh1 vs. TAIR 10
Match:
AT3G17300.1 (unknown protein; Has 48 Blast hits to 48 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). )
HSP 1 Score: 149.1 bits (375), Expect = 1.8e-36
Identity = 71/91 (78.02%), Postives = 85/91 (93.41%), Query Frame = 0
Query: 1 MPSLQTALPPELANNVIRLYRECLRRAKFVGHRQHNTELIVDMVRQQFKKNMHETDPEKI 60
MPSLQT+LPPELANNV+RLYRECLRRAKF+G +QHNTEL+V MVRQQFKK+M+ETDPEKI
Sbjct: 1 MPSLQTSLPPELANNVVRLYRECLRRAKFIGKQQHNTELVVGMVRQQFKKHMNETDPEKI 60
Query: 61 QKMKDEAARGLINHMLYEHERMSGQKLSQSS 92
QK+KD+AARGLINHML+E +++G K+SQ S
Sbjct: 61 QKLKDDAARGLINHMLFESAKLTGGKVSQRS 91
BLAST of MELO3C006742.jh1 vs. TAIR 10
Match:
AT3G17300.2 (unknown protein; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35 Blast hits to 35 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )
HSP 1 Score: 90.1 bits (222), Expect = 9.8e-19
Identity = 43/58 (74.14%), Postives = 53/58 (91.38%), Query Frame = 0
Query: 34 QHNTELIVDMVRQQFKKNMHETDPEKIQKMKDEAARGLINHMLYEHERMSGQKLSQSS 92
QHNTEL+V MVRQQFKK+M+ETDPEKIQK+KD+AARGLINHML+E +++G K+SQ S
Sbjct: 17 QHNTELVVGMVRQQFKKHMNETDPEKIQKLKDDAARGLINHMLFESAKLTGGKVSQRS 74
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_008438986.1 | 6.42e-57 | 100.00 | PREDICTED: uncharacterized protein LOC103483919 [Cucumis melo] >XP_008438987.1 P... | [more] |
XP_004147626.1 | 8.79e-55 | 95.60 | uncharacterized protein LOC101203751 [Cucumis sativus] >XP_011651093.1 uncharact... | [more] |
XP_031490696.1 | 3.22e-50 | 88.89 | uncharacterized protein LOC116257839 isoform X2 [Nymphaea colorata] | [more] |
XP_010270901.1 | 4.72e-50 | 86.81 | PREDICTED: uncharacterized protein LOC104607091 isoform X2 [Nelumbo nucifera] >D... | [more] |
XP_022964695.1 | 6.71e-50 | 85.71 | uncharacterized protein LOC111464671 [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A1S3AYB1 | 3.11e-57 | 100.00 | uncharacterized protein LOC103483919 OS=Cucumis melo OX=3656 GN=LOC103483919 PE=... | [more] |
A0A5A7UD86 | 3.11e-57 | 100.00 | Complex1_LYR domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN... | [more] |
A0A0A0L5F6 | 8.88e-51 | 92.22 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G171030 PE=4 SV=1 | [more] |
A0A1U8AWB6 | 2.29e-50 | 86.81 | uncharacterized protein LOC104607091 isoform X2 OS=Nelumbo nucifera OX=4432 GN=L... | [more] |
A0A6J1HLJ6 | 3.25e-50 | 85.71 | uncharacterized protein LOC111464671 OS=Cucurbita moschata OX=3662 GN=LOC1114646... | [more] |
Match Name | E-value | Identity | Description | |
AT3G17300.1 | 1.8e-36 | 78.02 | unknown protein; Has 48 Blast hits to 48 proteins in 21 species: Archae - 0; Bac... | [more] |
AT3G17300.2 | 9.8e-19 | 74.14 | unknown protein; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth ... | [more] |