MELO3C006519.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C006519.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Non-specific lipid-transfer protein-like protein
Location	chr06: 4302665 .. 4304115 (+)
RNA-Seq Expression	MELO3C006519.jh1
Synteny	MELO3C006519.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ACAAATCAAACTCTCTTACCTTCTGAGTTCTCATCAAATAAACTAACTCTCCTCTTTACCATTCCCAGAAGTTTTTGTATTAGTCCTCTATAGCAGAATGGAATACACAAGGATGGTGGCGGGTCTAGTTGCGGTTATCGTTGCTGTGCACTGGGCAGGAGCAGCTGCACAGTCCGACTGTACAAATGTGCTGATCAGTATGGCACCTTGCCTGAATTATATTACAGGGAACTCCTCTACCCCATCACAATCATGCTGCACACAGCTTTCAAGTGTTGTCCGTTCACAGCCACAGTGCTTGTGCCAGGTCCTGAATGGTGGTGGAGCGTCGCTTGGGGTGAATATCAACCAAACGCAGGCCCTAGCTCTGCCCCAAGCTTGCAACGTTCAGACTCCATCTGTCAGCAGCTGCAATGGTAAACATACCAATCTCTATCACCAGCTGCATGTTATTTATTAATAAATAATGAAGATATGAACCAATATCAATCTCTTTCTAAAGTGCTAACTTGTGATACCTGAAAAATTGCCAGTTGATTCTCCCGCCGGCTCTCCAGCAGGAGCACCAGACTCTTCAAACAATGTTCCTTCAGGTATGAACATAAAAAAAGATACTTTTAATTGTATGCTTGGTCAGTTCGTTCACACGGTCAATTAAAGTACCTAACTGCTTGTGCAGGAACTGGATCTAAGACTGTTCCATCAACAGACAATGGCTCATCAGACGGAAGCTCCATCCATTTGTCAAAACCTCTACTATTCTCCATCTTGTTGGCTTCTATATATGCTTCAGCTTTCAAGTTGTACTGATCTTCTTATCAGTAGCCTCTTTTCTACAAGTTTGGTTTATTGCTGGTCATTTATTGCATTTAGATATTTTTTGGAGTGTCCATTATTTTAAGCATCCCTTTTGTTTAGGGTGTTTTATTCTATCTTCATATTCTCCTCATCTGGCATTTGTTTCCATGAACTTTGTATTGTATCAGAGATTCTTTTGAATAAAATACATGATCGTGTGCTTGTGAGTAAATGGAATGAATGTCTACAGTAAAATACATGATTAAGTAACATGAATAAATGGAATGAATGTCTAAAATAGTTATGAATATTCACTTCCATCAGTGATTACAAACAGAAGGTATACAAAAACATTAAGCAGAGAAAAGAACCACAAATGAATTTGAATAAAGTTACAAATTATCTTCATTTTTTAATAACCATTGACATAATAAAATCCTGCTCGTGTAATACAACTATTTCTAATAAATTCTTACTTGGAGCAAACTCATCATCCCGTGGCAGTATGGTTAAAATTTTCCCCCCATCAACATTGCCAATTAGAAAAAAAAACTGTCAGCCTCAAATCAAAAGAATGAAAGCGAAAAAACTTGTTGGAATAATATTTAAGGTTGAAACCAAAGAAAGAAGAAACAAATTGCTTAAAATTGATG

mRNA sequence

ACAAATCAAACTCTCTTACCTTCTGAGTTCTCATCAAATAAACTAACTCTCCTCTTTACCATTCCCAGAAGTTTTTGTATTAGTCCTCTATAGCAGAATGGAATACACAAGGATGGTGGCGGGTCTAGTTGCGGTTATCGTTGCTGTGCACTGGGCAGGAGCAGCTGCACAGTCCGACTGTACAAATGTGCTGATCAGTATGGCACCTTGCCTGAATTATATTACAGGGAACTCCTCTACCCCATCACAATCATGCTGCACACAGCTTTCAAGTGTTGTCCGTTCACAGCCACAGTGCTTGTGCCAGGTCCTGAATGGTGGTGGAGCGTCGCTTGGGGTGAATATCAACCAAACGCAGGCCCTAGCTCTGCCCCAAGCTTGCAACGTTCAGACTCCATCTGTCAGCAGCTGCAATGTTGATTCTCCCGCCGGCTCTCCAGCAGGAGCACCAGACTCTTCAAACAATGTTCCTTCAGGAACTGGATCTAAGACTGTTCCATCAACAGACAATGGCTCATCAGACGGAAGCTCCATCCATTTGTCAAAACCTCTACTATTCTCCATCTTGTTGGCTTCTATATATGCTTCAGCTTTCAAGTTGTACTGATCTTCTTATCAGTAGCCTCTTTTCTACAAGTTTGGTTTATTGCTGGTCATTTATTGCATTTAGATATTTTTTGGAGTGTCCATTATTTTAAGCATCCCTTTTGTTTAGGGTGTTTTATTCTATCTTCATATTCTCCTCATCTGGCATTTGTTTCCATGAACTTTGTATTGTATCAGAGATTCTTTTGAATAAAATACATGATCGTGTGCTTGTGAGTAAATGGAATGAATGTCTACAGTAAAATACATGATTAAGTAACATGAATAAATGGAATGAATGTCTAAAATAGTTATGAATATTCACTTCCATCAGTGATTACAAACAGAAGGTATACAAAAACATTAAGCAGAGAAAAGAACCACAAATGAATTTGAATAAAGTTACAAATTATCTTCATTTTTTAATAACCATTGACATAATAAAATCCTGCTCGTGTAATACAACTATTTCTAATAAATTCTTACTTGGAGCAAACTCATCATCCCGTGGCAGTATGGTTAAAATTTTCCCCCCATCAACATTGCCAATTAGAAAAAAAAACTGTCAGCCTCAAATCAAAAGAATGAAAGCGAAAAAACTTGTTGGAATAATATTTAAGGTTGAAACCAAAGAAAGAAGAAACAAATTGCTTAAAATTGATG

Coding sequence (CDS)

ATGGAATACACAAGGATGGTGGCGGGTCTAGTTGCGGTTATCGTTGCTGTGCACTGGGCAGGAGCAGCTGCACAGTCCGACTGTACAAATGTGCTGATCAGTATGGCACCTTGCCTGAATTATATTACAGGGAACTCCTCTACCCCATCACAATCATGCTGCACACAGCTTTCAAGTGTTGTCCGTTCACAGCCACAGTGCTTGTGCCAGGTCCTGAATGGTGGTGGAGCGTCGCTTGGGGTGAATATCAACCAAACGCAGGCCCTAGCTCTGCCCCAAGCTTGCAACGTTCAGACTCCATCTGTCAGCAGCTGCAATGTTGATTCTCCCGCCGGCTCTCCAGCAGGAGCACCAGACTCTTCAAACAATGTTCCTTCAGGAACTGGATCTAAGACTGTTCCATCAACAGACAATGGCTCATCAGACGGAAGCTCCATCCATTTGTCAAAACCTCTACTATTCTCCATCTTGTTGGCTTCTATATATGCTTCAGCTTTCAAGTTGTACTGA

Protein sequence

MEYTRMVAGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSSVVRSQPQCLCQVLNGGGASLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDSSNNVPSGTGSKTVPSTDNGSSDGSSIHLSKPLLFSILLASIYASAFKLY

Homology

[Close]

BLAST of MELO3C006519.jh1 vs. NCBI nr
Match: XP_008438652.1 (PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Cucumis melo] >KAA0049348.1 non-specific lipid-transfer protein-like protein [Cucumis melo var. makuwa] >TYK17210.1 non-specific lipid-transfer protein-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 320 bits (819), Expect = 9.05e-110
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0


Query: 1   MEYTRMVAGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSSV 60
           MEYTRMVAGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSSV
Sbjct: 1   MEYTRMVAGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSSV 60

Query: 61  VRSQPQCLCQVLNGGGASLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS 120
           VRSQPQCLCQVLNGGGASLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS
Sbjct: 61  VRSQPQCLCQVLNGGGASLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS 120

Query: 121 SNNVPSGTGSKTVPSTDNGSSDGSSIHLSKPLLFSILLASIYASAFKLY 169
           SNNVPSGTGSKTVPSTDNGSSDGSSIHLSKPLLFSILLASIYASAFKLY
Sbjct: 121 SNNVPSGTGSKTVPSTDNGSSDGSSIHLSKPLLFSILLASIYASAFKLY 169

[Close]

BLAST of MELO3C006519.jh1 vs. NCBI nr
Match: XP_004134131.1 (non-specific lipid-transfer protein-like protein At2g13820 [Cucumis sativus] >KGN56963.1 hypothetical protein Csa_011105 [Cucumis sativus])

HSP 1 Score: 313 bits (802), Expect = 3.54e-107
Identity = 164/169 (97.04%), Postives = 167/169 (98.82%), Query Frame = 0


Query: 1   MEYTRMVAGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSSV 60
           MEYTRMV GLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLS+V
Sbjct: 1   MEYTRMVVGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSNV 60

Query: 61  VRSQPQCLCQVLNGGGASLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS 120
           VRS PQCLCQVLNGGG+SLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS
Sbjct: 61  VRSNPQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS 120

Query: 121 SNNVPSGTGSKTVPSTDNGSSDGSSIHLSKPLLFSILLASIYASAFKLY 169
           SNNVPSGTGSKTVPSTDNGSSDGSSIH+SKPLLFSILLASIYASAFKLY
Sbjct: 121 SNNVPSGTGSKTVPSTDNGSSDGSSIHMSKPLLFSILLASIYASAFKLY 169

[Close]

BLAST of MELO3C006519.jh1 vs. NCBI nr
Match: XP_038902233.1 (non-specific lipid transfer protein GPI-anchored 19 [Benincasa hispida])

HSP 1 Score: 291 bits (744), Expect = 2.46e-98
Identity = 151/169 (89.35%), Postives = 160/169 (94.67%), Query Frame = 0


Query: 1   MEYTRMVAGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSSV 60
           ME+TRMV GLV V VAVHWAG AAQSDCTNVLIS++PCLNYITGNSSTPSQ+CCTQL+SV
Sbjct: 1   MEHTRMVMGLVVVFVAVHWAGVAAQSDCTNVLISLSPCLNYITGNSSTPSQTCCTQLASV 60

Query: 61  VRSQPQCLCQVLNGGGASLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS 120
           VRSQPQCLCQVLNGGG+SLGVNINQTQALALP+ACNVQTPS+SSCNVDSP  SPAGAPDS
Sbjct: 61  VRSQPQCLCQVLNGGGSSLGVNINQTQALALPRACNVQTPSISSCNVDSPTSSPAGAPDS 120

Query: 121 SNNVPSGTGSKTVPSTDNGSSDGSSIHLSKPLLFSILLASIYASAFKLY 169
           SNNVPSGTGSKTVPSTDN +SDGSSI LSKPLLFSILLAS YASAFKLY
Sbjct: 121 SNNVPSGTGSKTVPSTDNDASDGSSIQLSKPLLFSILLASTYASAFKLY 169

[Close]

BLAST of MELO3C006519.jh1 vs. NCBI nr
Match: XP_022974389.1 (non-specific lipid-transfer protein-like protein At2g13820 [Cucurbita maxima] >XP_022975120.1 non-specific lipid-transfer protein-like protein At2g13820 [Cucurbita maxima] >XP_022975476.1 non-specific lipid-transfer protein-like protein At2g13820 isoform X1 [Cucurbita maxima])

HSP 1 Score: 283 bits (725), Expect = 1.93e-95
Identity = 148/169 (87.57%), Postives = 158/169 (93.49%), Query Frame = 0


Query: 1   MEYTRMVAGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSSV 60
           M   +MV  L+AVIVAVHWAGAAAQSDCTNVLIS++PCLNYITGNSSTPSQ CCTQL++V
Sbjct: 1   MAQGKMVMALLAVIVAVHWAGAAAQSDCTNVLISLSPCLNYITGNSSTPSQGCCTQLATV 60

Query: 61  VRSQPQCLCQVLNGGGASLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS 120
           VRSQPQCLCQVLNGGG+SLGVNINQTQALALPQACNVQTPS+SSCNV SP GSPAG+P+S
Sbjct: 61  VRSQPQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSISSCNVASPTGSPAGSPES 120

Query: 121 SNNVPSGTGSKTVPSTDNGSSDGSSIHLSKPLLFSILLASIYASAFKLY 169
           SNNVPSGTGSKTVPS DN SSDGSSIHLSKPLLFSILLAS YASAFKLY
Sbjct: 121 SNNVPSGTGSKTVPSPDNNSSDGSSIHLSKPLLFSILLASTYASAFKLY 169

[Close]

BLAST of MELO3C006519.jh1 vs. NCBI nr
Match: XP_022934392.1 (non-specific lipid-transfer protein-like protein At2g13820 [Cucurbita moschata] >XP_023539478.1 non-specific lipid-transfer protein-like protein At2g13820 [Cucurbita pepo subsp. pepo] >KAG7028894.1 Non-specific lipid-transfer protein-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 283 bits (723), Expect = 3.90e-95
Identity = 148/169 (87.57%), Postives = 158/169 (93.49%), Query Frame = 0


Query: 1   MEYTRMVAGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSSV 60
           M   +MV  L+AVIVAVHWAGAAAQSDCTNVLIS++PCLNYITGNSSTPSQ CCTQL++V
Sbjct: 1   MAQGKMVMTLLAVIVAVHWAGAAAQSDCTNVLISLSPCLNYITGNSSTPSQGCCTQLATV 60

Query: 61  VRSQPQCLCQVLNGGGASLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS 120
           VRSQPQCLCQVLNGGG+SLGVNINQTQALALPQACNVQTPS+SSCNV SP GSPAG+P+S
Sbjct: 61  VRSQPQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSISSCNVASPTGSPAGSPES 120

Query: 121 SNNVPSGTGSKTVPSTDNGSSDGSSIHLSKPLLFSILLASIYASAFKLY 169
           SNNVPSGTGSKTVPS DN SSDGSSIHLSKPLLFSILLAS YASAFKLY
Sbjct: 121 SNNVPSGTGSKTVPSPDNNSSDGSSIHLSKPLLFSILLASTYASAFKLY 169

[Close]

BLAST of MELO3C006519.jh1 vs. ExPASy Swiss-Prot
Match: Q9LJ86 (Non-specific lipid transfer protein GPI-anchored 5 OS=Arabidopsis thaliana OX=3702 GN=LTPG5 PE=2 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 8.5e-37
Identity = 87/139 (62.59%), Postives = 101/139 (72.66%), Query Frame = 0


Query: 23  AAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSSVVRSQPQCLCQVLNGGGASLGVN 82
           +AQS CTN LISM+PCLNYITGNS++P+Q CC QLS VV+S P CLCQVLNGGG+ LG+N
Sbjct: 23  SAQSSCTNALISMSPCLNYITGNSTSPNQQCCNQLSRVVQSSPDCLCQVLNGGGSQLGIN 82

Query: 83  INQTQALALPQACNVQTPSVSSCNVDSPAG-----SPAGAPDSSNNVPSGTGSKTVPSTD 142
           +NQTQAL LP+ACNVQTP VS CN     G     SPA +P+SS     G GSKTVP  +
Sbjct: 83  VNQTQALGLPRACNVQTPPVSRCNTGGGGGGSTSDSPAESPNSSG---PGNGSKTVPVGE 142

Query: 143 NG---SSDGSSIHLSKPLL 154
                SSDGSSI  S PL+
Sbjct: 143 GDGPPSSDGSSIKFSFPLI 158

[Close]

BLAST of MELO3C006519.jh1 vs. ExPASy Swiss-Prot
Match: Q2PE59 (Non-specific lipid transfer protein GPI-anchored 26 OS=Arabidopsis thaliana OX=3702 GN=LTPG26 PE=2 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.0e-29
Identity = 78/147 (53.06%), Postives = 97/147 (65.99%), Query Frame = 0


Query: 23  AAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSSVVRSQPQCLCQVLNGGGASLGVN 82
           +AQS CTNVLISMAPCL++IT N+S PSQ CC QL+ VVR   +CLCQVL+GGG+ LG+N
Sbjct: 21  SAQSSCTNVLISMAPCLSFITQNTSLPSQQCCNQLAHVVRYSSECLCQVLDGGGSQLGIN 80

Query: 83  INQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDSSNNVPSGTGSKTVPSTDNGSSD 142
           +N+TQALALP+AC+V+TP  S C+  S   S         +   G GSKTVP  +  SSD
Sbjct: 81  VNETQALALPKACHVETPPASRCHSGSSVNS---------HSEHGNGSKTVP-REKSSSD 140

Query: 143 GSSIHLSKPLLFSILLASIYASAFKLY 170
           G SI  S PLL  +  AS     +  Y
Sbjct: 141 G-SIKFSFPLLAILFTASYITLIYAKY 156

[Close]

BLAST of MELO3C006519.jh1 vs. ExPASy Swiss-Prot
Match: Q7EB72 (Non-specific lipid transfer protein GPI-anchored 15 OS=Arabidopsis thaliana OX=3702 GN=LTPG15 PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.0e-25
Identity = 73/179 (40.78%), Postives = 102/179 (56.98%), Query Frame = 0


Query: 1   MEYTRMVAGLVAVIVAVHWAGAAAQ--SDCTNVLISMAPCLNYITGNSSTPSQSCCTQLS 60
           M Y R  A     +VA  W+   AQ  S C + L +++PCL+YITGNS+TPSQ CC++L 
Sbjct: 1   MGYRRSYAITFVALVAALWSVTKAQPSSSCVSTLTTLSPCLSYITGNSTTPSQPCCSRLD 60

Query: 61  SVVRSQPQCLCQVLNGGGASLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAP 120
           SV++S PQC+C  +N    ++G+NIN+TQAL LP ACN+QTP ++ CN  +   +   AP
Sbjct: 61  SVIKSSPQCICSAVNSPIPNIGLNINRTQALQLPNACNIQTPPLTQCNAATGPTAQPPAP 120

Query: 121 DSSNNVPS---------------GTGSKTVPSTDNGSS----DGSSIHLSKPLLFSILL 159
             +   P                G GSKTVPS   GSS    D   +H    L+F++L+
Sbjct: 121 SPTEKTPDVTLTPTSLPGARSGVGGGSKTVPSVGTGSSSRNVDPLPLHF---LMFAVLV 176

[Close]

BLAST of MELO3C006519.jh1 vs. ExPASy Swiss-Prot
Match: F4HZB9 (Non-specific lipid transfer protein GPI-anchored 19 OS=Arabidopsis thaliana OX=3702 GN=LTPG19 PE=3 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.2e-21
Identity = 70/161 (43.48%), Postives = 95/161 (59.01%), Query Frame = 0


Query: 6   MVAGLVAVIVAVHWAGAA--AQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSSVVRS 65
           M+  ++A+++A    G A   Q+ C + L S++PCL Y+ G SS+PS SCC Q S+VV+S
Sbjct: 1   MILAILALVIATFLYGGATTVQAGCRDTLTSLSPCLYYLNGGSSSPSWSCCRQFSTVVQS 60

Query: 66  QPQCLCQVLNGGGASL-GVNINQTQALALPQACNVQTPSVSSCNVDS------PAGSPAG 125
            P+CLC V+N   +S  G   N+T AL LP ACNVQTPS S CN         PA +P G
Sbjct: 61  SPECLCSVVNSNESSFYGFKFNRTLALNLPTACNVQTPSPSLCNTGGNVPTTLPANTPVG 120

Query: 126 APDSSNNVPSGT--------GSKTVPSTDNGSSDGSSIHLS 150
           +P S+ + PSGT        GSK  P ++  SS  + I LS
Sbjct: 121 SPRSAPS-PSGTTSPANTPSGSKKFPLSNESSSKSNVIILS 160

[Close]

BLAST of MELO3C006519.jh1 vs. ExPASy Swiss-Prot
Match: Q9ZQI8 (Non-specific lipid transfer protein GPI-anchored 11 OS=Arabidopsis thaliana OX=3702 GN=LTPG11 PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.6e-11
Identity = 50/162 (30.86%), Postives = 89/162 (54.94%), Query Frame = 0


Query: 10  LVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSST--PSQSCCTQLSSVVRSQPQC 69
           + +V+  +    A A  DC++++++MA CL+++T  S+   P  +CC+ L +VVR+ P+C
Sbjct: 9   IFSVVALMSGERAHAAVDCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRTGPEC 68

Query: 70  LCQVLNGGGASLGVNINQTQALALPQACNVQTPSVSSCNV----DSPAGSPAGAPDSSNN 129
           LC+     G SLG+ ++ ++A +LP  C V  P  + C +    D PA +P  +P +   
Sbjct: 69  LCEAFKNSG-SLGLTLDLSKAASLPSVCKVAAPPSARCGLSVSGDPPATAPGLSPTAGAG 128

Query: 130 VP--SGTGSKTVPSTDNGSSDGSSIHLSKP-LLFSILLASIY 163
            P  S   +   P +   SSD S + +S   ++F  L++S Y
Sbjct: 129 APALSSGANAATPVSSPRSSDASLLSVSFAFVIFMALISSFY 169

[Close]

BLAST of MELO3C006519.jh1 vs. ExPASy TrEMBL
Match: A0A5D3D0R3 (Non-specific lipid-transfer protein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00570 PE=3 SV=1)

HSP 1 Score: 320 bits (819), Expect = 4.38e-110
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0


Query: 1   MEYTRMVAGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSSV 60
           MEYTRMVAGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSSV
Sbjct: 1   MEYTRMVAGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSSV 60

Query: 61  VRSQPQCLCQVLNGGGASLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS 120
           VRSQPQCLCQVLNGGGASLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS
Sbjct: 61  VRSQPQCLCQVLNGGGASLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS 120

Query: 121 SNNVPSGTGSKTVPSTDNGSSDGSSIHLSKPLLFSILLASIYASAFKLY 169
           SNNVPSGTGSKTVPSTDNGSSDGSSIHLSKPLLFSILLASIYASAFKLY
Sbjct: 121 SNNVPSGTGSKTVPSTDNGSSDGSSIHLSKPLLFSILLASIYASAFKLY 169

[Close]

BLAST of MELO3C006519.jh1 vs. ExPASy TrEMBL
Match: A0A1S3AX08 (non-specific lipid-transfer protein-like protein At2g13820 OS=Cucumis melo OX=3656 GN=LOC103483695 PE=3 SV=1)

HSP 1 Score: 320 bits (819), Expect = 4.38e-110
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0


Query: 1   MEYTRMVAGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSSV 60
           MEYTRMVAGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSSV
Sbjct: 1   MEYTRMVAGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSSV 60

Query: 61  VRSQPQCLCQVLNGGGASLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS 120
           VRSQPQCLCQVLNGGGASLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS
Sbjct: 61  VRSQPQCLCQVLNGGGASLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS 120

Query: 121 SNNVPSGTGSKTVPSTDNGSSDGSSIHLSKPLLFSILLASIYASAFKLY 169
           SNNVPSGTGSKTVPSTDNGSSDGSSIHLSKPLLFSILLASIYASAFKLY
Sbjct: 121 SNNVPSGTGSKTVPSTDNGSSDGSSIHLSKPLLFSILLASIYASAFKLY 169

[Close]

BLAST of MELO3C006519.jh1 vs. ExPASy TrEMBL
Match: A0A0A0L5G6 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G146490 PE=3 SV=1)

HSP 1 Score: 313 bits (802), Expect = 1.71e-107
Identity = 164/169 (97.04%), Postives = 167/169 (98.82%), Query Frame = 0


Query: 1   MEYTRMVAGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSSV 60
           MEYTRMV GLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLS+V
Sbjct: 1   MEYTRMVVGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSNV 60

Query: 61  VRSQPQCLCQVLNGGGASLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS 120
           VRS PQCLCQVLNGGG+SLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS
Sbjct: 61  VRSNPQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS 120

Query: 121 SNNVPSGTGSKTVPSTDNGSSDGSSIHLSKPLLFSILLASIYASAFKLY 169
           SNNVPSGTGSKTVPSTDNGSSDGSSIH+SKPLLFSILLASIYASAFKLY
Sbjct: 121 SNNVPSGTGSKTVPSTDNGSSDGSSIHMSKPLLFSILLASIYASAFKLY 169

[Close]

BLAST of MELO3C006519.jh1 vs. ExPASy TrEMBL
Match: A0A6J1IEC3 (non-specific lipid-transfer protein-like protein At2g13820 OS=Cucurbita maxima OX=3661 GN=LOC111474858 PE=3 SV=1)

HSP 1 Score: 283 bits (725), Expect = 9.36e-96
Identity = 148/169 (87.57%), Postives = 158/169 (93.49%), Query Frame = 0


Query: 1   MEYTRMVAGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSSV 60
           M   +MV  L+AVIVAVHWAGAAAQSDCTNVLIS++PCLNYITGNSSTPSQ CCTQL++V
Sbjct: 1   MAQGKMVMALLAVIVAVHWAGAAAQSDCTNVLISLSPCLNYITGNSSTPSQGCCTQLATV 60

Query: 61  VRSQPQCLCQVLNGGGASLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS 120
           VRSQPQCLCQVLNGGG+SLGVNINQTQALALPQACNVQTPS+SSCNV SP GSPAG+P+S
Sbjct: 61  VRSQPQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSISSCNVASPTGSPAGSPES 120

Query: 121 SNNVPSGTGSKTVPSTDNGSSDGSSIHLSKPLLFSILLASIYASAFKLY 169
           SNNVPSGTGSKTVPS DN SSDGSSIHLSKPLLFSILLAS YASAFKLY
Sbjct: 121 SNNVPSGTGSKTVPSPDNNSSDGSSIHLSKPLLFSILLASTYASAFKLY 169

[Close]

BLAST of MELO3C006519.jh1 vs. ExPASy TrEMBL
Match: A0A6J1F2M0 (non-specific lipid-transfer protein-like protein At2g13820 OS=Cucurbita moschata OX=3662 GN=LOC111441577 PE=3 SV=1)

HSP 1 Score: 283 bits (723), Expect = 1.89e-95
Identity = 148/169 (87.57%), Postives = 158/169 (93.49%), Query Frame = 0


Query: 1   MEYTRMVAGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSSV 60
           M   +MV  L+AVIVAVHWAGAAAQSDCTNVLIS++PCLNYITGNSSTPSQ CCTQL++V
Sbjct: 1   MAQGKMVMTLLAVIVAVHWAGAAAQSDCTNVLISLSPCLNYITGNSSTPSQGCCTQLATV 60

Query: 61  VRSQPQCLCQVLNGGGASLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS 120
           VRSQPQCLCQVLNGGG+SLGVNINQTQALALPQACNVQTPS+SSCNV SP GSPAG+P+S
Sbjct: 61  VRSQPQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSISSCNVASPTGSPAGSPES 120

Query: 121 SNNVPSGTGSKTVPSTDNGSSDGSSIHLSKPLLFSILLASIYASAFKLY 169
           SNNVPSGTGSKTVPS DN SSDGSSIHLSKPLLFSILLAS YASAFKLY
Sbjct: 121 SNNVPSGTGSKTVPSPDNNSSDGSSIHLSKPLLFSILLASTYASAFKLY 169

[Close]

BLAST of MELO3C006519.jh1 vs. TAIR 10
Match: AT3G22600.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 154.8 bits (390), Expect = 6.0e-38
Identity = 87/139 (62.59%), Postives = 101/139 (72.66%), Query Frame = 0


Query: 23  AAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSSVVRSQPQCLCQVLNGGGASLGVN 82
           +AQS CTN LISM+PCLNYITGNS++P+Q CC QLS VV+S P CLCQVLNGGG+ LG+N
Sbjct: 23  SAQSSCTNALISMSPCLNYITGNSTSPNQQCCNQLSRVVQSSPDCLCQVLNGGGSQLGIN 82

Query: 83  INQTQALALPQACNVQTPSVSSCNVDSPAG-----SPAGAPDSSNNVPSGTGSKTVPSTD 142
           +NQTQAL LP+ACNVQTP VS CN     G     SPA +P+SS     G GSKTVP  +
Sbjct: 83  VNQTQALGLPRACNVQTPPVSRCNTGGGGGGSTSDSPAESPNSSG---PGNGSKTVPVGE 142

Query: 143 NG---SSDGSSIHLSKPLL 154
                SSDGSSI  S PL+
Sbjct: 143 GDGPPSSDGSSIKFSFPLI 158

[Close]

BLAST of MELO3C006519.jh1 vs. TAIR 10
Match: AT4G14815.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 131.3 bits (329), Expect = 7.1e-31
Identity = 78/147 (53.06%), Postives = 97/147 (65.99%), Query Frame = 0


Query: 23  AAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSSVVRSQPQCLCQVLNGGGASLGVN 82
           +AQS CTNVLISMAPCL++IT N+S PSQ CC QL+ VVR   +CLCQVL+GGG+ LG+N
Sbjct: 21  SAQSSCTNVLISMAPCLSFITQNTSLPSQQCCNQLAHVVRYSSECLCQVLDGGGSQLGIN 80

Query: 83  INQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDSSNNVPSGTGSKTVPSTDNGSSD 142
           +N+TQALALP+AC+V+TP  S C+  S   S         +   G GSKTVP  +  SSD
Sbjct: 81  VNETQALALPKACHVETPPASRCHSGSSVNS---------HSEHGNGSKTVP-REKSSSD 140

Query: 143 GSSIHLSKPLLFSILLASIYASAFKLY 170
           G SI  S PLL  +  AS     +  Y
Sbjct: 141 G-SIKFSFPLLAILFTASYITLIYAKY 156

[Close]

BLAST of MELO3C006519.jh1 vs. TAIR 10
Match: AT2G48130.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 117.1 bits (292), Expect = 1.4e-26
Identity = 73/179 (40.78%), Postives = 102/179 (56.98%), Query Frame = 0


Query: 1   MEYTRMVAGLVAVIVAVHWAGAAAQ--SDCTNVLISMAPCLNYITGNSSTPSQSCCTQLS 60
           M Y R  A     +VA  W+   AQ  S C + L +++PCL+YITGNS+TPSQ CC++L 
Sbjct: 1   MGYRRSYAITFVALVAALWSVTKAQPSSSCVSTLTTLSPCLSYITGNSTTPSQPCCSRLD 60

Query: 61  SVVRSQPQCLCQVLNGGGASLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAP 120
           SV++S PQC+C  +N    ++G+NIN+TQAL LP ACN+QTP ++ CN  +   +   AP
Sbjct: 61  SVIKSSPQCICSAVNSPIPNIGLNINRTQALQLPNACNIQTPPLTQCNAATGPTAQPPAP 120

Query: 121 DSSNNVPS---------------GTGSKTVPSTDNGSS----DGSSIHLSKPLLFSILL 159
             +   P                G GSKTVPS   GSS    D   +H    L+F++L+
Sbjct: 121 SPTEKTPDVTLTPTSLPGARSGVGGGSKTVPSVGTGSSSRNVDPLPLHF---LMFAVLV 176

[Close]

BLAST of MELO3C006519.jh1 vs. TAIR 10
Match: AT1G03103.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 103.6 bits (257), Expect = 1.6e-22
Identity = 70/161 (43.48%), Postives = 95/161 (59.01%), Query Frame = 0


Query: 6   MVAGLVAVIVAVHWAGAA--AQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSSVVRS 65
           M+  ++A+++A    G A   Q+ C + L S++PCL Y+ G SS+PS SCC Q S+VV+S
Sbjct: 1   MILAILALVIATFLYGGATTVQAGCRDTLTSLSPCLYYLNGGSSSPSWSCCRQFSTVVQS 60

Query: 66  QPQCLCQVLNGGGASL-GVNINQTQALALPQACNVQTPSVSSCNVDS------PAGSPAG 125
            P+CLC V+N   +S  G   N+T AL LP ACNVQTPS S CN         PA +P G
Sbjct: 61  SPECLCSVVNSNESSFYGFKFNRTLALNLPTACNVQTPSPSLCNTGGNVPTTLPANTPVG 120

Query: 126 APDSSNNVPSGT--------GSKTVPSTDNGSSDGSSIHLS 150
           +P S+ + PSGT        GSK  P ++  SS  + I LS
Sbjct: 121 SPRSAPS-PSGTTSPANTPSGSKKFPLSNESSSKSNVIILS 160

[Close]

BLAST of MELO3C006519.jh1 vs. TAIR 10
Match: AT2G13820.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 70.9 bits (172), Expect = 1.1e-12
Identity = 50/162 (30.86%), Postives = 89/162 (54.94%), Query Frame = 0


Query: 10  LVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSST--PSQSCCTQLSSVVRSQPQC 69
           + +V+  +    A A  DC++++++MA CL+++T  S+   P  +CC+ L +VVR+ P+C
Sbjct: 9   IFSVVALMSGERAHAAVDCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRTGPEC 68

Query: 70  LCQVLNGGGASLGVNINQTQALALPQACNVQTPSVSSCNV----DSPAGSPAGAPDSSNN 129
           LC+     G SLG+ ++ ++A +LP  C V  P  + C +    D PA +P  +P +   
Sbjct: 69  LCEAFKNSG-SLGLTLDLSKAASLPSVCKVAAPPSARCGLSVSGDPPATAPGLSPTAGAG 128

Query: 130 VP--SGTGSKTVPSTDNGSSDGSSIHLSKP-LLFSILLASIY 163
            P  S   +   P +   SSD S + +S   ++F  L++S Y
Sbjct: 129 APALSSGANAATPVSSPRSSDASLLSVSFAFVIFMALISSFY 169

The following BLAST results are available for this feature:

BLAST of MELO3C006519.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008438652.1	9.05e-110	100.00	PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Cucumis m...	[more]
XP_004134131.1	3.54e-107	97.04	non-specific lipid-transfer protein-like protein At2g13820 [Cucumis sativus] >KG...	[more]
XP_038902233.1	2.46e-98	89.35	non-specific lipid transfer protein GPI-anchored 19 [Benincasa hispida]	[more]
XP_022974389.1	1.93e-95	87.57	non-specific lipid-transfer protein-like protein At2g13820 [Cucurbita maxima] >X...	[more]
XP_022934392.1	3.90e-95	87.57	non-specific lipid-transfer protein-like protein At2g13820 [Cucurbita moschata] ...	[more]

BLAST of MELO3C006519.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LJ86	8.5e-37	62.59	Non-specific lipid transfer protein GPI-anchored 5 OS=Arabidopsis thaliana OX=37...	[more]
Q2PE59	1.0e-29	53.06	Non-specific lipid transfer protein GPI-anchored 26 OS=Arabidopsis thaliana OX=3...	[more]
Q7EB72	2.0e-25	40.78	Non-specific lipid transfer protein GPI-anchored 15 OS=Arabidopsis thaliana OX=3...	[more]
F4HZB9	2.2e-21	43.48	Non-specific lipid transfer protein GPI-anchored 19 OS=Arabidopsis thaliana OX=3...	[more]
Q9ZQI8	1.6e-11	30.86	Non-specific lipid transfer protein GPI-anchored 11 OS=Arabidopsis thaliana OX=3...	[more]

BLAST of MELO3C006519.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D0R3	4.38e-110	100.00	Non-specific lipid-transfer protein-like protein OS=Cucumis melo var. makuwa OX=...	[more]
A0A1S3AX08	4.38e-110	100.00	non-specific lipid-transfer protein-like protein At2g13820 OS=Cucumis melo OX=36...	[more]
A0A0A0L5G6	1.71e-107	97.04	AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G146490 PE=3 SV...	[more]
A0A6J1IEC3	9.36e-96	87.57	non-specific lipid-transfer protein-like protein At2g13820 OS=Cucurbita maxima O...	[more]
A0A6J1F2M0	1.89e-95	87.57	non-specific lipid-transfer protein-like protein At2g13820 OS=Cucurbita moschata...	[more]

BLAST of MELO3C006519.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G22600.1	6.0e-38	62.59	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT4G14815.1	7.1e-31	53.06	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G48130.1	1.4e-26	40.78	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G03103.1	1.6e-22	43.48	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G13820.1	1.1e-12	30.86	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000528	Plant non-specific lipid-transfer protein/Par allergen	PRINTS	PR00382	LIPIDTRNSFER	coord: 27..43 score: 36.02 coord: 82..99 score: 32.14 coord: 48..62 score: 25.64
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 28..105 e-value: 5.0E-9 score: 46.0
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 12..105 e-value: 5.8E-18 score: 64.8
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 25..107 e-value: 2.1E-18 score: 67.9
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 27..108
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..142
None	No IPR available	PANTHER	PTHR33044:SF180	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN	coord: 7..163
None	No IPR available	CDD	cd00010	AAI_LTSS	coord: 35..97 e-value: 2.80367E-24 score: 87.8674
IPR043325	Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein	PANTHER	PTHR33044	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED	coord: 7..163

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C006519.jh1.t1	MELO3C006519.jh1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport
molecular_function	GO:0008289	lipid binding