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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. GAAGTTTGGATAAAATCACAACTGATTGGACAAATAAACGAAGATTCGTAAAAAGAAAATCCAACCGTAAAGCCTTAAATTAGTTATCTAATATTCATTGATCTAAAGTACAGAGACCAAAAACAATAAGGATGAAGAATGACAGCGTTTAAACCTGTATTTCATCAGTTCTTCAACCAGTAATCTGAATGAAATTCTATCAGCGAAGAAAATCGAGAACACAGCTAAAGCACACACAGGTTTGGAAATCAGTTGAAATTCTATGACTATTTTTTCTTTCGATAATTGTTTCACCAAAAGAAAGAAAAAAGAGAATCGAAATGAAAATTTTCATCAGTGAAAAAAAAAATATCAAGAACGCAGTTGAATTAAAAATTGAAAACGAAATTACAGGAAATTGAAATATCATTAGCCAAGAATACGAGACGATGCTTTTTCTCCTTTCGATAATTCCATCATTAAATCCAAAAACAGAAAATCGGAACGAAATTAAAGCGCGTTGGAAAACAGATTGAAATCATCAGAAAACGAAGGACCAGAGCAAGAATAGAAAACAGAATCAGGCCTCAGACAGAGTGTTCTCAGTCATAAAATTATCAGACAATGTAGGCAAATCAAAATATCAATCATCACCGGCCTGATTCAGCAAGAAGAAAGAGAAATGAAAACAAAGAGAAAAGAGAAAAATGGCGAGTGAAGAGATGGCTCAGTTCAGCGGGGTAGTCGACATGCAAAGACGTTTCACTCATTCAAGGAAGAAAGAGGAAATTACTCTGCAATCCGGTCTGTTGAGCTTGAATTTTACTGAGTCGTCACAGCGATCTTCTTCACTCGCAAGAAAATACAAAATCAAAAGCTTACATAAAAAAGAAGAAAAAAAAGTTGAAAGAGGAAACAGCTTCGGCAACGAAGGCGCTGTGTGATTGA mRNA sequence GAAGTTTGGATAAAATCACAACTGATTGGACAAATAAACGAAGATTCGTAAAAAGAAAATCCAACCGTAAAGCCTTAAATTAGTTATCTAATATTCATTGATCTAAAGTACAGAGACCAAAAACAATAAGGATGAAGAATGACAGCGTTTAAACCTGTATTTCATCAGTTCTTCAACCAGTAATCTGAATGAAATTCTATCAGCGAAGAAAATCGAGAACACAGCTAAAGCACACACAGGTTTGGAAATCAGTTGAAATTCTATGACTATTTTTTCTTTCGATAATTGTTTCACCAAAAGAAAGAAAAAAGAGAATCGAAATGAAAATTTTCATCAGTGAAAAAAAAAATATCAAGAACGCAGTTGAATTAAAAATTGAAAACGAAATTACAGGAAATTGAAATATCATTAGCCAAGAATACGAGACGATGCTTTTTCTCCTTTCGATAATTCCATCATTAAATCCAAAAACAGAAAATCGGAACGAAATTAAAGCGCGTTGGAAAACAGATTGAAATCATCAGAAAACGAAGGACCAGAGCAAGAATAGAAAACAGAATCAGGCCTCAGACAGAGTGTTCTCAGTCATAAAATTATCAGACAATGTAGGCAAATCAAAATATCAATCATCACCGGCCTGATTCAGCAAGAAGAAAGAGAAATGAAAACAAAGAGAAAAGAGAAAAATGGCGAGTGAAGAGATGGCTCAGTTCAGCGGGGTAGTCGACATGCAAAGACGTTTCACTCATTCAAGGAAGAAAGAGGAAATTACTCTGCAATCCGGTCTGTTGAGCTTGAATTTTACTGAGTCGTCACAGCGATCTTCTTCACTCGCAAGAAAATACAAAATCAAAAGCTTACATAAAAAAGAAGAAAAAAAAGTTGAAAGAGGAAACAGCTTCGGCAACGAAGGCGCTGTGTGATTGA Coding sequence (CDS) ATGGCGAGTGAAGAGATGGCTCAGTTCAGCGGGGTAGTCGACATGCAAAGACGTTTCACTCATTCAAGGAAGAAAGAGGAAATTACTCTGCAATCCGGTCTGTTGAGCTTGAATTTTACTGAGTCGTCACAGCGATCTTCTTCACTCGCAAGAAAATACAAAATCAAAAGCTTACATAAAAAAGAAGAAAAAAAAGTTGAAAGAGGAAACAGCTTCGGCAACGAAGGCGCTGTGTGA Protein sequence MASEEMAQFSGVVDMQRRFTHSRKKEEITLQSGLLSLNFTESSQRSSSLARKYKIKSLHKKEEKKVERGNSFGNEGAV
Homology
BLAST of MELO3C005460.jh1 vs. NCBI nr
Match: KGN50326.1 (hypothetical protein Csa_000200 [Cucumis sativus]) HSP 1 Score: 107 bits (267), Expect = 1.52e-28 Identity = 56/63 (88.89%), Postives = 62/63 (98.41%), Query Frame = 0 Query: 1 MASEEMAQFSGVVDMQRRFTHSRKKEEITLQSGLLSLNFTESSQRSSSLARKYKIKSLHK 60 MASEEMAQFSGVVDMQRRFTHSRKKEEITLQSGLLSLNFTESS+RS+SLARKYK+KS+ + Sbjct: 1 MASEEMAQFSGVVDMQRRFTHSRKKEEITLQSGLLSLNFTESSRRSTSLARKYKMKSIKE 60
Query: 61 KEE 63 +EE Sbjct: 61 EEE 63
BLAST of MELO3C005460.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KRH6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G167180 PE=4 SV=1) HSP 1 Score: 107 bits (267), Expect = 7.34e-29 Identity = 56/63 (88.89%), Postives = 62/63 (98.41%), Query Frame = 0 Query: 1 MASEEMAQFSGVVDMQRRFTHSRKKEEITLQSGLLSLNFTESSQRSSSLARKYKIKSLHK 60 MASEEMAQFSGVVDMQRRFTHSRKKEEITLQSGLLSLNFTESS+RS+SLARKYK+KS+ + Sbjct: 1 MASEEMAQFSGVVDMQRRFTHSRKKEEITLQSGLLSLNFTESSRRSTSLARKYKMKSIKE 60
Query: 61 KEE 63 +EE Sbjct: 61 EEE 63
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KGN50326.1 | 1.52e-28 | 88.89 | hypothetical protein Csa_000200 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0KRH6 | 7.34e-29 | 88.89 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G167180 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 59..78 |
Relationships
The following mRNA feature(s) are a part of this gene:
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