MELO3C003298.jh1 (gene) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDSstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATTCATCATATATTCTTCCTCTTTTATTTGTTTATTTATTAAAATACCGGTCACTGGCTATTGCCAGTAAGAGGTCGCTCTTCCGGGGCTCTCGTGTGGCGGTAACAGTTGCATGTGTTACAGGTCGTTCCGGTTACTCTAAATCAATTCCCTTCTCTCCCTGGGTTGTTTCTTTTGAATTCTTTTCTCTTCTTCTATTCTCTCTCTCTCTCTCTCTCAGTCTTTGAAAAATCTCTGGTATTGATTCTCTTCTTTCCTTTCCGATTCCTTTTGGATCGGACGGCTTGCTTCATCTAAGGTAATCGATTCTCTCCTTTCCAGATCTCTTCTCGTCTTTGTTCGTTCTAATTTTAATCTGATTCTGTTTGTTTTTCCTGTATAATTATCGTCTGTTCTACCTAATTTCTTGCGTTTTTAAGGTCTTGTTGCGTTTTTCCTTCTAATTCTGTGGAGAATGATCGTTTTTTGAGCTATTTGTGCCGTTTTATTTATTTATTTATTATCTTAATAATTTATGCTGGAGTTGTTTTGAGTGAAGTGAAGAAACAAGTAGCAGTACGAGTTCAAGAGTTGAAGTTGTGGTAATTAATTACATTTTAGGTTTATTTTTCAGTTTAATGCTCTGTTAGCGATTTAACACAGGTGATTTTTCTTATGCGATAGACTTGGAGTCGACAGAATCTAGTTTTGCTTTATTGTATGTAGTTTTCTACTGTGAATTATCTGTAGCTGGCTGATTGTTAGTTTGTCGATTCTACAGATAGCTTTTAAAATTGAAATTTAGGGATTCTGGTCTCATTAAGGTCAAATATGTTCAAGAACATGTATAGTATTACTATTTACTTTTGTTTGCTTCTGGATGTCTGGATGTTCATGTTCGGCAGTCATTACGTATCATATAGACTTCGTGTTCCTTTGACTTTTGTGAAAACAGTTTCTAGAGGTTGCTTTCACTGCATTTGTGCACGTTGGCATGTACTTTTATGTTAGAAATTGTCTTTATTGTTTCCTGTACTGTTTGAGGTACTGCTCCTTAGTTTGGCTCAAATTGTTCTTGTCCTGATTTTCGTGCATGTAGGTTGTTGTTTCTTAAACTATAGGAGTTGTACTAACTTGCTGTATTGTTATACTGCTGCTCAACGAGTAGTTATTTTGTACAGGTCTTTGCCTTTCATAATGAAGGGGTCCAAGGGTAAGGGAACATCAAGGGTCTCCAAAGAAGCTTTGAAGCCAGTCGATGATAGGTAGTTTTTTGCCTATTGTTCCACTACATGTCTCTTATGTTATTGGTCTGATGAAAGTTCCGTAAATTGTTCAGTTATGCCTGTCTGTGATCCATTGTTGGCATCTTTTTTTTTGAGTATCGAATTTCCAGCAAGTTTTTGACTTCCATTGATGTCTAATATTCACATACTTGGTTATGTGTATACAGTGTTTACAGGAATTTTGTAGTGACGGATCATAAATATCTCATTTCTTTTCAGAAAGGTTGGGAAGCGAAAGGCTGTTGTTAAAGCTGACAAGGGTACCAAACGACCAACAAAGAAAGATTTGAAAGCCAAGAAAGATCCCAACAAACCAAAGAGGCCTCCGAGTGCTTTCTTTGTTTTCCTGTTCGTATTTGTTCTCTGCCGTTTTGTCTTCATTTGTTTGATTTCCTTAAGAAGAAAAATTCTCTTATTTGGTTATATTTATATAACAGTGAGGAGTTCAGAAAGGAGTACAAAAGGGAAAATCCTAATGTGAAGGCAGTATCTGCAGTATGTGATCTGTGAAACTGATCTAATGATTCACATAATTCCCAATTGGTGATGCAAATATAGAGTAACTTACTAACATTTTCTCCACTCCTGCAGGTCGGAAAAGCTGGAGGAGAGAAGTGGAAATCCTTAAGTCACGCTGTAAGTATTATTGTGCATTACATAAAAATGAAAGCATGCTTAATCCTTGAGTCTTTTCCCTTTTTACTGCATGCATTTATGTATGATGATGAATGAAACACTGTTTATAGAGCTGTGGTATTCGTGTTGCTGCCAAATCTTGAAACCAGCGTCACTTTCAGCAATCTTGTATTGAATATCAAGTTGATACGTGTGTGCATGCTTTTTTTTCTTTGCCTTTTTCATTTTGTTGTGTTTTAATAATTTTTTTATGAGAAATCATAACTTTCATTGAGAAGAAAATGAAATAATATAAGAGCATACAAAAAAACCAATCCACAAAAAACAACTCAACTGAAGGAAGGGAGACCATCTGAAGGCAATGAAAGAATCACAACTTAATAGTTTTTCTGCCTCTGTATTGATATTTTCTTACATTTGGGCATTTACACTTTTATTCTCTCAACAGTATTTTACATTTTGCGTTTCTTTATATAATAACTTCTTAATGGTTTAAAAGGAAAAAGCACCATATGAAGCCAAGGCAGCTAAGAGGAAGGCTGAATATGAAAAGCTTATGAGGGCATATGACAGCAAGAAGGTAGTTGTGCTCTGTTTTTTTGTGTATTAATTAAATTTACAAGACATGACTCCAAACTTAAAGTGCTCATACACCTTTTTTCGGGAATATAGGCCAGCGCAGCAGATGACGAAGAATCAGAGAGGTCAAAATCTGAAGTGAATGACGAGGATGAGGCCAGTGAGGAGGTATTTTTTTAATACATAAGAAGGAAATGCTACAATGCTTGTTTTTAGAGCGTGTCTATGCATTTCAGTTCATAGTAAGCCAATTAAGATCCCTCTCTGCTGTTATTTATTTTTTTTTTTTGAAGTTGAAAGTAACAAAAATTTATAGATCAGAGAACACTTTTGGATTAGTTGGTAATAATTTCATTTTCGCACCTTTAAATTTGTAACCATTTGGTTTATGGTCTTTAATAAGTAACAAATCTGATCTCCTTGCTTTATAATTTGTAAGAGTCTATTTCCTATCGTGAAAGCATCTAATCTTCAACGGTATATCAATAAAATTTCATTAAATCATGTCATTCTAAACTCTAGAGAGTAAATTGGTTCTTATTAAGGTTCAAGGACAATTAGTATTGTAACTCCCTCGCAGCCAACGCCAATAACAAGAATGCAATAGAAAGGGCATGGATTTGGTAAAAGTAGAATTAGGGTTTCATAAAATTTGACTATTAAACCACTTGCAGGAGCATCAAGAAGAGGATGATGAGGACGAGGAAGATGATGAAGATGATGACTAAATTGAAAGCCAACTTGTTTGTATCGGCCAACCCAGCTGGTAGAGGGAGGAAGGTGATGTATGTTCATATATCTTTGCATGCTTTCTGTTCATTTTGTATTTGTGTGCAACATGATAACGTGTCAGAATATCTTTACTTGTTTTAATGGTCTCCTTCACTTTACATCCCCTTTGTCATATTACATTGTTAAAATCTTGGGGGTATTTTGGCCTTTCTTTTGATAACCAATATGAAATTATCAAATACATCTTTTGGAAGCTGTACTTCAA ATTCATCATATATTCTTCCTCTTTTATTTGTTTATTTATTAAAATACCGGTCACTGGCTATTGCCAGTAAGAGGTCGCTCTTCCGGGGCTCTCGTGTGGCGGTAACAGTTGCATGTGTTACAGGTCGTTCCGGTTACTCTAAATCAATTCCCTTCTCTCCCTGGGTTGTTTCTTTTGAATTCTTTTCTCTTCTTCTATTCTCTCTCTCTCTCTCTCTCAGTCTTTGAAAAATCTCTGGTATTGATTCTCTTCTTTCCTTTCCGATTCCTTTTGGATCGGACGGCTTGCTTCATCTAAGTTATTTTGTACAGGTCTTTGCCTTTCATAATGAAGGGGTCCAAGGGTAAGGGAACATCAAGGGTCTCCAAAGAAGCTTTGAAGCCAGTCGATGATAGAAAGGTTGGGAAGCGAAAGGCTGTTGTTAAAGCTGACAAGGGTACCAAACGACCAACAAAGAAAGATTTGAAAGCCAAGAAAGATCCCAACAAACCAAAGAGGCCTCCGAGTGCTTTCTTTGTTTTCCTTGAGGAGTTCAGAAAGGAGTACAAAAGGGAAAATCCTAATGTGAAGGCAGTATCTGCAGTCGGAAAAGCTGGAGGAGAGAAGTGGAAATCCTTAAGTCACGCTGAAAAAGCACCATATGAAGCCAAGGCAGCTAAGAGGAAGGCTGAATATGAAAAGCTTATGAGGGCATATGACAGCAAGAAGGCCAGCGCAGCAGATGACGAAGAATCAGAGAGGTCAAAATCTGAAGTGAATGACGAGGATGAGGCCAGTGAGGAGGAGCATCAAGAAGAGGATGATGAGGACGAGGAAGATGATGAAGATGATGACTAAATTGAAAGCCAACTTGTTTGTATCGGCCAACCCAGCTGGTAGAGGGAGGAAGGTGATGTATGTTCATATATCTTTGCATGCTTTCTGTTCATTTTGTATTTGTGTGCAACATGATAACGTGTCAGAATATCTTTACTTGTTTTAATGGTCTCCTTCACTTTACATCCCCTTTGTCATATTACATTGTTAAAATCTTGGGGGTATTTTGGCCTTTCTTTTGATAACCAATATGAAATTATCAAATACATCTTTTGGAAGCTGTACTTCAA ATGAAGGGGTCCAAGGGTAAGGGAACATCAAGGGTCTCCAAAGAAGCTTTGAAGCCAGTCGATGATAGAAAGGTTGGGAAGCGAAAGGCTGTTGTTAAAGCTGACAAGGGTACCAAACGACCAACAAAGAAAGATTTGAAAGCCAAGAAAGATCCCAACAAACCAAAGAGGCCTCCGAGTGCTTTCTTTGTTTTCCTTGAGGAGTTCAGAAAGGAGTACAAAAGGGAAAATCCTAATGTGAAGGCAGTATCTGCAGTCGGAAAAGCTGGAGGAGAGAAGTGGAAATCCTTAAGTCACGCTGAAAAAGCACCATATGAAGCCAAGGCAGCTAAGAGGAAGGCTGAATATGAAAAGCTTATGAGGGCATATGACAGCAAGAAGGCCAGCGCAGCAGATGACGAAGAATCAGAGAGGTCAAAATCTGAAGTGAATGACGAGGATGAGGCCAGTGAGGAGGAGCATCAAGAAGAGGATGATGAGGACGAGGAAGATGATGAAGATGATGACTAA MKGSKGKGTSRVSKEALKPVDDRKVGKRKAVVKADKGTKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEYKRENPNVKAVSAVGKAGGEKWKSLSHAEKAPYEAKAAKRKAEYEKLMRAYDSKKASAADDEESERSKSEVNDEDEASEEEHQEEDDEDEEDDEDDD Homology
BLAST of MELO3C003298.jh1 vs. NCBI nr
Match: XP_008449957.1 (PREDICTED: high mobility group B protein 1 [Cucumis melo] >XP_008449965.1 PREDICTED: high mobility group B protein 1 [Cucumis melo]) HSP 1 Score: 278 bits (711), Expect = 2.72e-93 Identity = 169/170 (99.41%), Postives = 169/170 (99.41%), Query Frame = 0
BLAST of MELO3C003298.jh1 vs. NCBI nr
Match: XP_011653690.1 (high mobility group B protein 1 [Cucumis sativus] >XP_011653691.1 high mobility group B protein 1 [Cucumis sativus] >XP_031740703.1 high mobility group B protein 1 [Cucumis sativus] >KGN54377.1 hypothetical protein Csa_017866 [Cucumis sativus]) HSP 1 Score: 275 bits (703), Expect = 4.36e-92 Identity = 164/169 (97.04%), Postives = 168/169 (99.41%), Query Frame = 0
BLAST of MELO3C003298.jh1 vs. NCBI nr
Match: XP_038883904.1 (high mobility group B protein 1 [Benincasa hispida] >XP_038883905.1 high mobility group B protein 1 [Benincasa hispida] >XP_038883906.1 high mobility group B protein 1 [Benincasa hispida]) HSP 1 Score: 268 bits (686), Expect = 1.82e-89 Identity = 158/167 (94.61%), Postives = 164/167 (98.20%), Query Frame = 0
BLAST of MELO3C003298.jh1 vs. NCBI nr
Match: KAA0031875.1 (high mobility group B protein 1 [Cucumis melo var. makuwa] >TYK09515.1 high mobility group B protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 267 bits (682), Expect = 4.29e-89 Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0
BLAST of MELO3C003298.jh1 vs. NCBI nr
Match: XP_022151579.1 (high mobility group B protein 1 [Momordica charantia] >XP_022151580.1 high mobility group B protein 1 [Momordica charantia]) HSP 1 Score: 253 bits (647), Expect = 1.59e-83 Identity = 153/168 (91.07%), Postives = 162/168 (96.43%), Query Frame = 0
BLAST of MELO3C003298.jh1 vs. ExPASy Swiss-Prot
Match: O49595 (High mobility group B protein 1 OS=Arabidopsis thaliana OX=3702 GN=HMGB1 PE=1 SV=1) HSP 1 Score: 176.4 bits (446), Expect = 2.7e-43 Identity = 119/177 (67.23%), Postives = 140/177 (79.10%), Query Frame = 0
BLAST of MELO3C003298.jh1 vs. ExPASy Swiss-Prot
Match: P26585 (HMG1/2-like protein OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 5.5e-28 Identity = 92/163 (56.44%), Postives = 112/163 (68.71%), Query Frame = 0
BLAST of MELO3C003298.jh1 vs. ExPASy Swiss-Prot
Match: P93047 (High mobility group B protein 3 OS=Arabidopsis thaliana OX=3702 GN=HMGB3 PE=1 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 2.1e-27 Identity = 84/140 (60.00%), Postives = 103/140 (73.57%), Query Frame = 0
BLAST of MELO3C003298.jh1 vs. ExPASy Swiss-Prot
Match: P40620 (HMG1/2-like protein OS=Vicia faba OX=3906 PE=2 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 1.8e-26 Identity = 87/165 (52.73%), Postives = 112/165 (67.88%), Query Frame = 0
BLAST of MELO3C003298.jh1 vs. ExPASy Swiss-Prot
Match: O49596 (High mobility group B protein 2 OS=Arabidopsis thaliana OX=3702 GN=HMGB2 PE=1 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 5.1e-26 Identity = 82/161 (50.93%), Postives = 108/161 (67.08%), Query Frame = 0
BLAST of MELO3C003298.jh1 vs. ExPASy TrEMBL
Match: A0A1S3BML2 (high mobility group B protein 1 OS=Cucumis melo OX=3656 GN=LOC103491684 PE=3 SV=1) HSP 1 Score: 278 bits (711), Expect = 1.32e-93 Identity = 169/170 (99.41%), Postives = 169/170 (99.41%), Query Frame = 0
BLAST of MELO3C003298.jh1 vs. ExPASy TrEMBL
Match: A0A0A0L1B2 (HMG box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G309150 PE=3 SV=1) HSP 1 Score: 275 bits (703), Expect = 2.11e-92 Identity = 164/169 (97.04%), Postives = 168/169 (99.41%), Query Frame = 0
BLAST of MELO3C003298.jh1 vs. ExPASy TrEMBL
Match: A0A5A7SRU9 (High mobility group B protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold994G00070 PE=3 SV=1) HSP 1 Score: 267 bits (682), Expect = 2.07e-89 Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0
BLAST of MELO3C003298.jh1 vs. ExPASy TrEMBL
Match: A0A6J1DBK9 (high mobility group B protein 1 OS=Momordica charantia OX=3673 GN=LOC111019485 PE=3 SV=1) HSP 1 Score: 253 bits (647), Expect = 7.68e-84 Identity = 153/168 (91.07%), Postives = 162/168 (96.43%), Query Frame = 0
BLAST of MELO3C003298.jh1 vs. ExPASy TrEMBL
Match: A0A6J1ISM4 (high mobility group B protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111478326 PE=3 SV=1) HSP 1 Score: 247 bits (630), Expect = 3.08e-81 Identity = 147/168 (87.50%), Postives = 159/168 (94.64%), Query Frame = 0
BLAST of MELO3C003298.jh1 vs. TAIR 10
Match: AT3G51880.4 (high mobility group B1 ) HSP 1 Score: 182.6 bits (462), Expect = 2.7e-46 Identity = 116/165 (70.30%), Postives = 136/165 (82.42%), Query Frame = 0
BLAST of MELO3C003298.jh1 vs. TAIR 10
Match: AT3G51880.1 (high mobility group B1 ) HSP 1 Score: 176.4 bits (446), Expect = 1.9e-44 Identity = 119/177 (67.23%), Postives = 140/177 (79.10%), Query Frame = 0
BLAST of MELO3C003298.jh1 vs. TAIR 10
Match: AT3G51880.3 (high mobility group B1 ) HSP 1 Score: 176.4 bits (446), Expect = 1.9e-44 Identity = 119/177 (67.23%), Postives = 140/177 (79.10%), Query Frame = 0
BLAST of MELO3C003298.jh1 vs. TAIR 10
Match: AT3G51880.2 (high mobility group B1 ) HSP 1 Score: 174.5 bits (441), Expect = 7.3e-44 Identity = 119/189 (62.96%), Postives = 141/189 (74.60%), Query Frame = 0
BLAST of MELO3C003298.jh1 vs. TAIR 10
Match: AT1G20696.1 (high mobility group B3 ) HSP 1 Score: 123.6 bits (309), Expect = 1.5e-28 Identity = 84/140 (60.00%), Postives = 103/140 (73.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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