MELO3C001992 (gene) Melon (DHL92) v4

Overview
NameMELO3C001992
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionChlorophyll a-b binding protein, chloroplastic
Locationchr12: 25597998 .. 25598553 (+)
RNA-Seq ExpressionMELO3C001992
SyntenyMELO3C001992
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGATGGGCGATGCTCGGAGTTGCAGGTATGGTATTGCCTTAAGTCTTAACTAATTTTGGAATCATCAAGGTACCAAAATGGTACGATGCGGGGAAAGCAGAGTATTTTGCATCGTCATCGACTCTCTTTGTGATTGAGTTCATTCTGTTCCATTATGTGGAATCAGAAGACGGCAAGATATAAAGAACTCAGGAAATGTAAATAAATATCCAATATTTAAGCAATACAGCTTGCCACCAAATGATGTTGGATACCCAGGGGGAATTTTCAACCCACTCAACTTTGAACCAACTCTTGAGGCCAAAGAAAAGGAGATTGCTAATGGTAAATGTCTCAAAAACAAACTAGTTAATCAACTACCTTAATTATTACACGTATAATAATGCGATTAATCAAAAGTTTTGATGATCTCTACAGGAAGACTGGCAATGTTGGCATCCTTGGGACTCATTGTTCAACACAATGTGCCTGGAAAAGGTCCATTTGACAACATCTTGCAGCACATTTCAGACCCATGGCACAACACTATAGTTCAAACACTAAGGGGATAG

mRNA sequence

ATGGCTGATGGGCGATGCTCGGAGTTGCAGCAATACAGCTTGCCACCAAATGATGTTGGATACCCAGGGGGAATTTTCAACCCACTCAACTTTGAACCAACTCTTGAGGCCAAAGAAAAGGAGATTGCTAATGGAAGACTGGCAATGTTGGCATCCTTGGGACTCATTGTTCAACACAATGTGCCTGGAAAAGGTCCATTTGACAACATCTTGCAGCACATTTCAGACCCATGGCACAACACTATAGTTCAAACACTAAGGGGATAG

Coding sequence (CDS)

ATGGCTGATGGGCGATGCTCGGAGTTGCAGCAATACAGCTTGCCACCAAATGATGTTGGATACCCAGGGGGAATTTTCAACCCACTCAACTTTGAACCAACTCTTGAGGCCAAAGAAAAGGAGATTGCTAATGGAAGACTGGCAATGTTGGCATCCTTGGGACTCATTGTTCAACACAATGTGCCTGGAAAAGGTCCATTTGACAACATCTTGCAGCACATTTCAGACCCATGGCACAACACTATAGTTCAAACACTAAGGGGATAG

Protein sequence

MADGRCSELQQYSLPPNDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLASLGLIVQHNVPGKGPFDNILQHISDPWHNTIVQTLRG
Homology
[Close]
BLAST of MELO3C001992 vs. ExPASy Swiss-Prot
Match: Q9SQL2 (Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum OX=3888 GN=lhcA-P4 PE=1 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 6.4e-36
Identity = 68/79 (86.08%), Postives = 72/79 (91.14%), Query Frame = 0 

Query: 10  QQYSLPPNDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLASLGLIVQHNVPGKGPFDN 69
           +QYSLP  +VGYPGGIFNPLNF PTLEAKEKEIANGRLAMLA LG I+QHNV GKGPFDN
Sbjct: 173 KQYSLPAGEVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDN 232

Query: 70  ILQHISDPWHNTIVQTLRG 89
           +LQHISDPWHNTIVQTL G
Sbjct: 233 LLQHISDPWHNTIVQTLGG 251

[Close]
BLAST of MELO3C001992 vs. ExPASy Swiss-Prot
Match: P27521 (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA4 PE=1 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 3.0e-33
Identity = 62/76 (81.58%), Postives = 69/76 (90.79%), Query Frame = 0 

Query: 10  QQYSLPPNDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLASLGLIVQHNVPGKGPFDN 69
           +QYSLP  +VGYPGGIFNPLNF PT EAKEKE+ANGRLAMLA LG +VQHNV GKGPF+N
Sbjct: 174 KQYSLPKGEVGYPGGIFNPLNFAPTQEAKEKELANGRLAMLAFLGFVVQHNVTGKGPFEN 233

Query: 70  ILQHISDPWHNTIVQT 86
           +LQH+SDPWHNTIVQT
Sbjct: 234 LLQHLSDPWHNTIVQT 249

[Close]
BLAST of MELO3C001992 vs. ExPASy Swiss-Prot
Match: Q36718 (Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment) OS=Hordeum vulgare OX=4513 GN=LHC Ib-20 PE=1 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 1.2e-29
Identity = 56/79 (70.89%), Postives = 68/79 (86.08%), Query Frame = 0 

Query: 10  QQYSLPPNDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLASLGLIVQHNVPGKGPFDN 69
           + YSLPP++ GYPG +FNPLNF P LE KEKE+ANGRLAMLA LG +VQHNV GKGPF+N
Sbjct: 153 KSYSLPPHECGYPGRVFNPLNFAP-LENKEKELANGRLAMLAFLGFLVQHNVHGKGPFEN 212

Query: 70  ILQHISDPWHNTIVQTLRG 89
           + QH++DPWHNTI+QT+ G
Sbjct: 213 LQQHLADPWHNTIIQTISG 230

[Close]
BLAST of MELO3C001992 vs. ExPASy Swiss-Prot
Match: Q9C639 (Photosystem I chlorophyll a/b-binding protein 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA5 PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.4e-14
Identity = 38/72 (52.78%), Postives = 49/72 (68.06%), Query Frame = 0 

Query: 20  GYPGG-IFNPLNFEPTLEA----KEKEIANGRLAMLASLGLIVQHNVPGKGPFDNILQHI 79
           GYPGG + NPL     ++     K KEI NGRLAM+A LG  VQ +V   GP DN+++H+
Sbjct: 180 GYPGGPLLNPLGLAKDVQNAHDWKLKEIKNGRLAMMAMLGFFVQASVTHTGPIDNLVEHL 239

Query: 80  SDPWHNTIVQTL 87
           S+PWH TI+QTL
Sbjct: 240 SNPWHKTIIQTL 251

[Close]
BLAST of MELO3C001992 vs. ExPASy Swiss-Prot
Match: Q9SDM1 (Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare OX=4513 GN=LHC Ib-21 PE=1 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 3.4e-13
Identity = 38/72 (52.78%), Postives = 46/72 (63.89%), Query Frame = 0 

Query: 16  PNDVGYPGGIFNPLNF--EPTL--EAKEKEIANGRLAMLASLGLIVQHNV-PGKGPFDNI 75
           P    YPGG F+PL F  +P    E K KEI NGRLAMLA +G  VQ +  PG GP +N+
Sbjct: 162 PEKKKYPGGAFDPLGFSKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENL 221

Query: 76  LQHISDPWHNTI 83
             H++DPWHN I
Sbjct: 222 ATHLADPWHNNI 233

[Close]
BLAST of MELO3C001992 vs. NCBI nr
Match: XP_038894825.1 (chlorophyll a-b binding protein P4, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 162.5 bits (410), Expect = 1.6e-36
Identity = 74/79 (93.67%), Postives = 75/79 (94.94%), Query Frame = 0 

Query: 10  QQYSLPPNDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLASLGLIVQHNVPGKGPFDN 69
           +QYSLPPNDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLA LG IVQHNV GKGPFDN
Sbjct: 173 KQYSLPPNDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDN 232

Query: 70  ILQHISDPWHNTIVQTLRG 89
            LQHISDPWHNTIVQTLRG
Sbjct: 233 FLQHISDPWHNTIVQTLRG 251

[Close]
BLAST of MELO3C001992 vs. NCBI nr
Match: XP_023524863.1 (chlorophyll a-b binding protein P4, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 162.2 bits (409), Expect = 2.1e-36
Identity = 73/79 (92.41%), Postives = 75/79 (94.94%), Query Frame = 0 

Query: 10  QQYSLPPNDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLASLGLIVQHNVPGKGPFDN 69
           +QYSLPPNDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLA LG I+QHNV GKGPFDN
Sbjct: 173 KQYSLPPNDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDN 232

Query: 70  ILQHISDPWHNTIVQTLRG 89
            LQHISDPWHNTIVQTLRG
Sbjct: 233 FLQHISDPWHNTIVQTLRG 251

[Close]
BLAST of MELO3C001992 vs. NCBI nr
Match: XP_022949090.1 (chlorophyll a-b binding protein P4, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 162.2 bits (409), Expect = 2.1e-36
Identity = 73/79 (92.41%), Postives = 75/79 (94.94%), Query Frame = 0 

Query: 10  QQYSLPPNDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLASLGLIVQHNVPGKGPFDN 69
           +QYSLPPNDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLA LG I+QHNV GKGPFDN
Sbjct: 173 KQYSLPPNDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDN 232

Query: 70  ILQHISDPWHNTIVQTLRG 89
            LQHISDPWHNTIVQTLRG
Sbjct: 233 FLQHISDPWHNTIVQTLRG 251

[Close]
BLAST of MELO3C001992 vs. NCBI nr
Match: XP_022998805.1 (chlorophyll a-b binding protein P4, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 161.8 bits (408), Expect = 2.7e-36
Identity = 72/79 (91.14%), Postives = 75/79 (94.94%), Query Frame = 0 

Query: 10  QQYSLPPNDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLASLGLIVQHNVPGKGPFDN 69
           +QYSLPPNDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLA LG I+QHNV GKGPFDN
Sbjct: 173 KQYSLPPNDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDN 232

Query: 70  ILQHISDPWHNTIVQTLRG 89
            LQHISDPWHNT+VQTLRG
Sbjct: 233 FLQHISDPWHNTVVQTLRG 251

[Close]
BLAST of MELO3C001992 vs. NCBI nr
Match: XP_022137160.1 (chlorophyll a-b binding protein P4, chloroplastic-like [Momordica charantia])

HSP 1 Score: 159.8 bits (403), Expect = 1.0e-35
Identity = 72/77 (93.51%), Postives = 73/77 (94.81%), Query Frame = 0 

Query: 12  YSLPPNDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLASLGLIVQHNVPGKGPFDNIL 71
           YSLPPNDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLA LG IVQHNV GKGPFDN L
Sbjct: 175 YSLPPNDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFL 234

Query: 72  QHISDPWHNTIVQTLRG 89
           QHISDPWHNTI+QTLRG
Sbjct: 235 QHISDPWHNTIIQTLRG 251

[Close]
BLAST of MELO3C001992 vs. ExPASy TrEMBL
Match: A0A6J1GBT1 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111452545 PE=3 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 1.0e-36
Identity = 73/79 (92.41%), Postives = 75/79 (94.94%), Query Frame = 0 

Query: 10  QQYSLPPNDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLASLGLIVQHNVPGKGPFDN 69
           +QYSLPPNDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLA LG I+QHNV GKGPFDN
Sbjct: 173 KQYSLPPNDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDN 232

Query: 70  ILQHISDPWHNTIVQTLRG 89
            LQHISDPWHNTIVQTLRG
Sbjct: 233 FLQHISDPWHNTIVQTLRG 251

[Close]
BLAST of MELO3C001992 vs. ExPASy TrEMBL
Match: A0A6J1KDI3 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111493358 PE=3 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.3e-36
Identity = 72/79 (91.14%), Postives = 75/79 (94.94%), Query Frame = 0 

Query: 10  QQYSLPPNDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLASLGLIVQHNVPGKGPFDN 69
           +QYSLPPNDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLA LG I+QHNV GKGPFDN
Sbjct: 173 KQYSLPPNDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDN 232

Query: 70  ILQHISDPWHNTIVQTLRG 89
            LQHISDPWHNT+VQTLRG
Sbjct: 233 FLQHISDPWHNTVVQTLRG 251

[Close]
BLAST of MELO3C001992 vs. ExPASy TrEMBL
Match: A0A6J1C5V9 (Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111008702 PE=3 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 5.1e-36
Identity = 72/77 (93.51%), Postives = 73/77 (94.81%), Query Frame = 0 

Query: 12  YSLPPNDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLASLGLIVQHNVPGKGPFDNIL 71
           YSLPPNDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLA LG IVQHNV GKGPFDN L
Sbjct: 175 YSLPPNDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFL 234

Query: 72  QHISDPWHNTIVQTLRG 89
           QHISDPWHNTI+QTLRG
Sbjct: 235 QHISDPWHNTIIQTLRG 251

[Close]
BLAST of MELO3C001992 vs. ExPASy TrEMBL
Match: A0A314YV68 (Chlorophyll a-b binding protein, chloroplastic OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_16420 PE=3 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 6.6e-36
Identity = 71/79 (89.87%), Postives = 76/79 (96.20%), Query Frame = 0 

Query: 10  QQYSLPPNDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLASLGLIVQHNVPGKGPFDN 69
           +QYSLPPN+VGYPGGIFNPLNF PTLEAKEKEIANGRLAMLA LGL+VQHNV GKGPFDN
Sbjct: 176 KQYSLPPNEVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGLLVQHNVTGKGPFDN 235

Query: 70  ILQHISDPWHNTIVQTLRG 89
           +LQH+SDPWHNTIVQTLRG
Sbjct: 236 LLQHLSDPWHNTIVQTLRG 254

[Close]
BLAST of MELO3C001992 vs. ExPASy TrEMBL
Match: M5WBL1 (Chlorophyll a-b binding protein, chloroplastic OS=Prunus persica OX=3760 GN=PRUPE_5G195100 PE=3 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.5e-35
Identity = 70/79 (88.61%), Postives = 75/79 (94.94%), Query Frame = 0 

Query: 10  QQYSLPPNDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLASLGLIVQHNVPGKGPFDN 69
           +QYSLPPN+VGYPGGIFNPLNF PTLEAKEKEIANGRLAMLA LG +VQHNV GKGPFDN
Sbjct: 176 KQYSLPPNEVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFVVQHNVTGKGPFDN 235

Query: 70  ILQHISDPWHNTIVQTLRG 89
           +LQH+SDPWHNTIVQTLRG
Sbjct: 236 LLQHLSDPWHNTIVQTLRG 254

[Close]
BLAST of MELO3C001992 vs. TAIR 10
Match: AT3G47470.1 (light-harvesting chlorophyll-protein complex I subunit A4 )

HSP 1 Score: 142.1 bits (357), Expect = 2.1e-34
Identity = 62/76 (81.58%), Postives = 69/76 (90.79%), Query Frame = 0 

Query: 10  QQYSLPPNDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLASLGLIVQHNVPGKGPFDN 69
           +QYSLP  +VGYPGGIFNPLNF PT EAKEKE+ANGRLAMLA LG +VQHNV GKGPF+N
Sbjct: 174 KQYSLPKGEVGYPGGIFNPLNFAPTQEAKEKELANGRLAMLAFLGFVVQHNVTGKGPFEN 233

Query: 70  ILQHISDPWHNTIVQT 86
           +LQH+SDPWHNTIVQT
Sbjct: 234 LLQHLSDPWHNTIVQT 249

[Close]
BLAST of MELO3C001992 vs. TAIR 10
Match: AT1G45474.1 (photosystem I light harvesting complex gene 5 )

HSP 1 Score: 80.1 bits (196), Expect = 9.8e-16
Identity = 38/72 (52.78%), Postives = 49/72 (68.06%), Query Frame = 0 

Query: 20  GYPGG-IFNPLNFEPTLEA----KEKEIANGRLAMLASLGLIVQHNVPGKGPFDNILQHI 79
           GYPGG + NPL     ++     K KEI NGRLAM+A LG  VQ +V   GP DN+++H+
Sbjct: 180 GYPGGPLLNPLGLAKDVQNAHDWKLKEIKNGRLAMMAMLGFFVQASVTHTGPIDNLVEHL 239

Query: 80  SDPWHNTIVQTL 87
           S+PWH TI+QTL
Sbjct: 240 SNPWHKTIIQTL 251

[Close]
BLAST of MELO3C001992 vs. TAIR 10
Match: AT1G45474.2 (photosystem I light harvesting complex gene 5 )

HSP 1 Score: 80.1 bits (196), Expect = 9.8e-16
Identity = 38/72 (52.78%), Postives = 49/72 (68.06%), Query Frame = 0 

Query: 20  GYPGG-IFNPLNFEPTLEA----KEKEIANGRLAMLASLGLIVQHNVPGKGPFDNILQHI 79
           GYPGG + NPL     ++     K KEI NGRLAM+A LG  VQ +V   GP DN+++H+
Sbjct: 180 GYPGGPLLNPLGLAKDVQNAHDWKLKEIKNGRLAMMAMLGFFVQASVTHTGPIDNLVEHL 239

Query: 80  SDPWHNTIVQTL 87
           S+PWH TI+QTL
Sbjct: 240 SNPWHKTIIQTL 251

[Close]
BLAST of MELO3C001992 vs. TAIR 10
Match: AT1G76570.1 (Chlorophyll A-B binding family protein )

HSP 1 Score: 75.5 bits (184), Expect = 2.4e-14
Identity = 37/77 (48.05%), Postives = 49/77 (63.64%), Query Frame = 0 

Query: 16  PNDVGYPGG-IFNPLNF--EPTL--EAKEKEIANGRLAMLASLGLIVQHNVPGKGPFDNI 75
           P D+ YPGG +F+PLN   +P    + K KEI NGRLAM+A LG   Q    GKGP  N+
Sbjct: 250 PGDINYPGGTLFDPLNLSEDPVAFEDLKVKEIKNGRLAMVAWLGFYAQAAFTGKGPVQNL 309

Query: 76  LQHISDPWHNTIVQTLR 88
           + H+SDP HN ++  L+
Sbjct: 310 VDHVSDPLHNNLIAMLQ 326

[Close]
BLAST of MELO3C001992 vs. TAIR 10
Match: AT3G54890.1 (photosystem I light harvesting complex gene 1 )

HSP 1 Score: 73.6 bits (179), Expect = 9.2e-14
Identity = 35/72 (48.61%), Postives = 45/72 (62.50%), Query Frame = 0 

Query: 16  PNDVGYPGGIFNPLNF----EPTLEAKEKEIANGRLAMLASLGLIVQHNV-PGKGPFDNI 75
           P    YPGG F+PL +    +   E K KEI NGRLA+LA +G  VQ +  PG GP +N+
Sbjct: 162 PEKKKYPGGAFDPLGYSKDPKKLEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENL 221

Query: 76  LQHISDPWHNTI 83
             H++DPWHN I
Sbjct: 222 ATHLADPWHNNI 233

The following BLAST results are available for this feature:
BLAST of MELO3C001992 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SQL26.4e-3686.08Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum OX=3888 GN=lh... [more]
P275213.0e-3381.58Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702... [more]
Q367181.2e-2970.89Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment) OS=Hordeum vulga... [more]
Q9C6391.4e-1452.78Photosystem I chlorophyll a/b-binding protein 5, chloroplastic OS=Arabidopsis th... [more]
Q9SDM13.4e-1352.78Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare OX=4513 ... [more]
BLAST of MELO3C001992 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038894825.11.6e-3693.67chlorophyll a-b binding protein P4, chloroplastic-like [Benincasa hispida][more]
XP_023524863.12.1e-3692.41chlorophyll a-b binding protein P4, chloroplastic-like [Cucurbita pepo subsp. pe... [more]
XP_022949090.12.1e-3692.41chlorophyll a-b binding protein P4, chloroplastic-like [Cucurbita moschata][more]
XP_022998805.12.7e-3691.14chlorophyll a-b binding protein P4, chloroplastic-like [Cucurbita maxima][more]
XP_022137160.11.0e-3593.51chlorophyll a-b binding protein P4, chloroplastic-like [Momordica charantia][more]
BLAST of MELO3C001992 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1GBT11.0e-3692.41Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=... [more]
A0A6J1KDI31.3e-3691.14Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO... [more]
A0A6J1C5V95.1e-3693.51Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN... [more]
A0A314YV686.6e-3689.87Chlorophyll a-b binding protein, chloroplastic OS=Prunus yedoensis var. nudiflor... [more]
M5WBL11.5e-3588.61Chlorophyll a-b binding protein, chloroplastic OS=Prunus persica OX=3760 GN=PRUP... [more]
BLAST of MELO3C001992 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G47470.12.1e-3481.58light-harvesting chlorophyll-protein complex I subunit A4 [more]
AT1G45474.19.8e-1652.78photosystem I light harvesting complex gene 5 [more]
AT1G45474.29.8e-1652.78photosystem I light harvesting complex gene 5 [more]
AT1G76570.12.4e-1448.05Chlorophyll A-B binding family protein [more]
AT3G54890.19.2e-1448.61photosystem I light harvesting complex gene 1 [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 15..59
e-value: 1.3E-11
score: 45.3
IPR023329Chlorophyll a/b binding domain superfamilyGENE3D1.10.3460.10Chlorophyll a/b binding protein domaincoord: 3..88
e-value: 6.8E-25
score: 90.0
IPR001344Chlorophyll A-B binding protein, plant and chromistaPANTHERPTHR21649CHLOROPHYLL A/B BINDING PROTEINcoord: 12..88
NoneNo IPR availablePANTHERPTHR21649:SF109CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTICcoord: 12..88
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 15..86

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C001992.1MELO3C001992.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009765 photosynthesis, light harvesting
cellular_component GO:0016020 membrane