MELO.jh102003.1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO.jh102003.1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Reverse transcriptase
Location	chr07: 9617142 .. 9620943 (-)
RNA-Seq Expression	MELO.jh102003.1
Synteny	MELO.jh102003.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGCGGACTTTGTCGGTAGATGCTGTGCCAGCGGTGAAGGCACCTAGGCGGCATCCGGGGTTGTTGCAACCCTTGAGTGTGCCAGGGTGGAAGTGGGAGAGTGTGTCGATGGATTTTATTACGGGACTGCCCAAGACCCTAAGGGGCTACACGGTGATCTGGGTTGTGGTCGACAGACTCACGAAGTCGGCCCACTTCGTGCCGGAAATCCACTTACACCGTAAGGGGGCAGCTATATATGACGAGATTGTGAGACTACATGGAGTACCCGTATCCATCACTTCAGACAGAGACGCCCGTTTCACATCGAAGTTCTGGAAAGGACTTCAACTTGCACTAGGTACAAGGTTGGACTTCAGCACGGCATTCCACCCTCAGACTGATGGTCAGACAGAGAGATTGAACCAGATTTTGGAAGACATGCTCCGAGCCTGCGTACTAGAGTTTTCAGGAAGTTGGGACTCCCATCTGCATCTGATGGAGTTTGCCTATAACAACAGCTACCAGGCTACTATCGGTATGGCACCGTTCGAGGCTCTGTATGGCAAGTGCTGTAGATCCCCTGTCTGCTGGGGCGAGGTTGGAGAGCAGAGGATGCTAGGCCCCGAATTAGTGCAGACGACCAACGCAGCCATACAGAAGATCCGAGCTCGTATGCTGACAGCCCAGAGCAGACAGAAGAGTTACGCTGATGTACGACGTAAGGACCTCGAGTTTGAAGTGGGAGATATGGTCTTTCTGAAGGTTGCACCCATGAAGGGTGTTCTGAGGTTCGCGAAGAAGGGGAAGCTGAGCCCACGCTTCGTAGGGCCGTTCGAGATATTGGAGCGGATTGGCCCCGTGGCTTACCGCTTGGCGCTACCCCCATCGTTTGCTGCAGTGCACGACGTATTCCATATCTCCATGCTGAGGAAATATGTCGCAGACCCAACACATGTGGTGGACTTCGAGCCACTGCAGGTTAGCGAGAATCTGAGCTACGAGGAGCAGCCTGTCGAGGTCCTGGCAAGGGAGGTCAAGAAGCTTCGCAGTCGAGAAATTCCACTGGTCAAAATCCTTTGGCGAACCATGGAGTGGAAGAGGCCACGTGGGAGAAAGAAGAGGATATGAGAGCCCAGTACCCCGAGCTGTTCGAGGATTAGAACTTTCGAGGACGAAAGTTTTTTTTTAGGAGGGAAGATTGTAACGCCCAACATTTTTCGGTTTCCTTTGTTATTTTGGACCACTAATAATATTAATATTAAGTGTGGTTATGGGAATTTTAAACTTCTTGGAAGAACCTTGTCTTTTTAATTCTCGAGTAATTAAGGTTGAAAATCTTCATTTGGTTTATGATAATAAGTATTTTTTGGAAATAATTGGGGAAGTTTTATAAAACTAAGGTTGGTTGGTTAAGGGAGAAATGTGGGGACCAGTTGGGGTTAATTGGTAAATTCCAAAAGATTTGGAGATATGGTAGGTGGTTATTTCTAATTAATTAAAGGAATTGGAAAAAGAAAAAAGATAAATTCTCTCTTTAAAGCACCTGGGACGCGCATAAGAAAATCAAAAAAAAAAAAAAAAGAAAAGAAGAAAGAAAGCATTTAAGCCGCCGCCGCCGCCGAAACCCTAGCCGCCTACCCACGCCACACGCCCAGCCGCGCCGGAGACATCAAACCAAGTCAAGCCACCGCACGCCGAGGATCGCTACGCACGCGGTCGTGTTTGGCCGGAACCACGCGCGCGTCGATCCGAGGCGGGCGGCCGCGTCGCGACGCCCGATCCAACGCCGAGGAGCCGCGCCGATTCCTCGGCCAAGCCGTGTCCGCAACGCCGTCGTTCACACGCCCCACGCGCGCCGCTTAGATCCGACGCAGCCGGACCGCCACCACTGGCGCCCGCTGAAATCCAGCAGCTAAGCCTCGCGCGCCGCCAACCCGAACCCGAACCGCCCGCGCCCGCTCGCCCGAACCCGAAACCGAACCCGCGCCGTGCCCACACGTGCCTAGCTCTCCCGCGCCGCGCCGCGCCGCCGCACCGCAAGCCGAGCCGCGCCTCCGGCGACGCGAGCCGAGCCGCATCCCTCCTGTTGCAAGCCGAGCCGCCGCGTAGCTTCCTCTGCCGAGCCGAGCCGGTCTGTCTTCTTCCAGAGCCGCAGGACTAAATTGGCTCCATCCACCTAAATTTTGGTAATCCATTTAATTATTGTGGTTTTTCCTAAGACTCCATGCTCGGACGTTAGTTAAATTAAATTGGGTCTAAATTCAATTATTTTTCTCAAGGGACGTCTTGGACCAAGAAATTACTGTAGCGCGGGATTTCTTCAGTAGGGGCTCGAGCACTGCAACCTCCTTCTAGGGTAAGTTAAATTCAATTGAGTCTCGAACCGTTGGTCGTTGGCGACCTATTTACGAATTTTGACTTATTAAACAGTTAGGACTTCGTCGCTTGGAAAACGTACTGCCTCGCGGTTAGGACTCGACAAGTAGATCTCCAGGTAAGAGATTCTACTACTAGTTTCATGTTTGAAGTATGAGACTGCGTATGCCCTATGTTGCATATTGAGAATTTGACAGTATGATGCCTGAAATAAATGTTAGTATGATGCAAATGACGATATAGTTGTGCTATAGCCTGTTGTGCGTGGCAAGATTTATTATGGTTACGACGAATGTCGGGACGGAGAGTGTAGAAATGATTTATGTGACATGTTATATGCTGATGCCATGTGTATGTATACTGCAATTAGGGTACCTGTTAGCTTGATTCTGTTAGAGTCGTACCTGCATGGGTGTCCTTCGGGATCACCACCTATTGAGGACTGTGTGGTCCGACGGGACGCCAGTCTAGCATGATATAGACATGACTCGAGTGACTCGACGGGGTCCTCGCATCCCGACTGTCCTAGGTGTCCCCCGGGCACCGAAGACCAGAGTTACGTTCCTACGGGAGCGCATGATTGCACGTGTTCGGGAACGTGCCAGAGATTGGGTACCAGTTATCAGGACTCTAACAGGAAGTTAACAGGCACCTAGTGGGACTAGTAGTGGGTCCCTTACTGAGTATTTTTATACTCATTCTCTCCATTTCATGTTTTCAGGTAGAGGACGAGGCAAGGGCAAGGGCAAGCTGGCGAGCGACCCGAAGTGAGACCGAGGAGGGCCATAGGGACTACCGCTTCCGCTTATTTCTTATTTCAGATTTTAGCATTTGAGTTTGAGTACTTTTTATTTTTCACTATCTTTTATGTAGATAGGGCCCGAGTAGGATTTCAGAACGTTTTTACATTTTTGCATGACTACCTTGTTTATGTTTTTATAAATGAATTTCTTGAACCGTATGCTTTTAATAAAATTTTTAGACTTAAACCACTTGTTCTATATTTAGTAATGACTTCGATTCAGCATAAGGAGTTGGGTCGTTACAACTTATTAGGACGTGGCAAACTCATTGAATAATCTGTCAAGAAAATGGTTGGTTAAAAGATAAATAACATACAGAATGTAGTTAGAGCAAATAAAACAAATAGGTTGACCACAAAATTGACCTACAAGGAAAAAGGAGTAATACATAACCCTAATAATAATAATTTTCAAAAAAAGAATAAAACAAATAAAATAGGGTTGATAACAAAATAGTTAAGGGGGCAACAGAAATTGGGTAGATCCTAAAAAATTTAAAGGCTGGCCTTGGATATCTCCCCATCGTAAGTGGTCATGGAAAGGGATGATGGGGTTGCAATTTAGGCATACCCTTTCAATTCCCTCCAACCTTCTTTAGTTTCAACTCCAAATCTTTTTCCATACCCTTTCCTCAATAA

mRNA sequence

ATGTGGCGGACTTTGTCGGTAGATGCTGTGCCAGCGGTGAAGGCACCTAGGCGGCATCCGGGGTTGTTGCAACCCTTGAGTGTGCCAGGGTGGAAGTGGGAGAGTGTGTCGATGGATTTTATTACGGGACTGCCCAAGACCCTAAGGGGCTACACGGTGATCTGGGTTGTGGTCGACAGACTCACGAAGTCGGCCCACTTCGTGCCGGAAATCCACTTACACCGTAAGGGGGCAGCTATATATGACGAGATTGTGAGACTACATGGAGTACCCGTATCCATCACTTCAGACAGAGACGCCCGTTTCACATCGAAGTTCTGGAAAGGACTTCAACTTGCACTAGGTACAAGGTTGGACTTCAGCACGGCATTCCACCCTCAGACTGATGGTCAGACAGAGAGATTGAACCAGATTTTGGAAGACATGCTCCGAGCCTGCGTACTAGAGTTTTCAGGAAGTTGGGACTCCCATCTGCATCTGATGGAGTTTGCCTATAACAACAGCTACCAGGCTACTATCGGTATGGCACCGTTCGAGGCTCTGTATGGCAAGTGCTGTAGATCCCCTGTCTGCTGGGGCGAGGTTGGAGAGCAGAGGATGCTAGGCCCCGAATTAGTGCAGACGACCAACGCAGCCATACAGAAGATCCGAGCTCGTATGCTGACAGCCCAGAGCAGACAGAAGAGTTACGCTGATGTACGACGTAAGGACCTCGAGTTTGAAGTGGGAGATATGGTCTTTCTGAAGGTTGCACCCATGAAGGGTGTTCTGAGGTTCGCGAAGAAGGGGAAGCTGAGCCCACGCTTCGTAGGGCCGTTCGAGATATTGGAGCGGATTGGCCCCGTGGCTTACCGCTTGGCGCTACCCCCATCGTTTGCTGCAGTGCACGACGTATTCCATATCTCCATGCTGAGGAAATATGTCGCAGACCCAACACATGTGGTGGACTTCGAGCCACTGCAGGTTAGCGAGAATCTGAGCTACGAGGAGCAGCCTGTCGAGGTCCTGGCAAGGGAGGTCAAGAAGCTTCGCAGTCGAGAAATTCCACTGGTAGAGGACGAGGCAAGGGCAAGGGCAAGCTGGCGAGCGACCCGAAGCATACCCTTTCAATTCCCTCCAACCTTCTTTAGTTTCAACTCCAAATCTTTTTCCATACCCTTTCCTCAATAA

Coding sequence (CDS)

ATGTGGCGGACTTTGTCGGTAGATGCTGTGCCAGCGGTGAAGGCACCTAGGCGGCATCCGGGGTTGTTGCAACCCTTGAGTGTGCCAGGGTGGAAGTGGGAGAGTGTGTCGATGGATTTTATTACGGGACTGCCCAAGACCCTAAGGGGCTACACGGTGATCTGGGTTGTGGTCGACAGACTCACGAAGTCGGCCCACTTCGTGCCGGAAATCCACTTACACCGTAAGGGGGCAGCTATATATGACGAGATTGTGAGACTACATGGAGTACCCGTATCCATCACTTCAGACAGAGACGCCCGTTTCACATCGAAGTTCTGGAAAGGACTTCAACTTGCACTAGGTACAAGGTTGGACTTCAGCACGGCATTCCACCCTCAGACTGATGGTCAGACAGAGAGATTGAACCAGATTTTGGAAGACATGCTCCGAGCCTGCGTACTAGAGTTTTCAGGAAGTTGGGACTCCCATCTGCATCTGATGGAGTTTGCCTATAACAACAGCTACCAGGCTACTATCGGTATGGCACCGTTCGAGGCTCTGTATGGCAAGTGCTGTAGATCCCCTGTCTGCTGGGGCGAGGTTGGAGAGCAGAGGATGCTAGGCCCCGAATTAGTGCAGACGACCAACGCAGCCATACAGAAGATCCGAGCTCGTATGCTGACAGCCCAGAGCAGACAGAAGAGTTACGCTGATGTACGACGTAAGGACCTCGAGTTTGAAGTGGGAGATATGGTCTTTCTGAAGGTTGCACCCATGAAGGGTGTTCTGAGGTTCGCGAAGAAGGGGAAGCTGAGCCCACGCTTCGTAGGGCCGTTCGAGATATTGGAGCGGATTGGCCCCGTGGCTTACCGCTTGGCGCTACCCCCATCGTTTGCTGCAGTGCACGACGTATTCCATATCTCCATGCTGAGGAAATATGTCGCAGACCCAACACATGTGGTGGACTTCGAGCCACTGCAGGTTAGCGAGAATCTGAGCTACGAGGAGCAGCCTGTCGAGGTCCTGGCAAGGGAGGTCAAGAAGCTTCGCAGTCGAGAAATTCCACTGGTAGAGGACGAGGCAAGGGCAAGGGCAAGCTGGCGAGCGACCCGAAGCATACCCTTTCAATTCCCTCCAACCTTCTTTAGTTTCAACTCCAAATCTTTTTCCATACCCTTTCCTCAATAA

Protein sequence

MWRTLSVDAVPAVKAPRRHPGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPEIHLHRKGAAIYDEIVRLHGVPVSITSDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPLQVSENLSYEEQPVEVLAREVKKLRSREIPLVEDEARARASWRATRSIPFQFPPTFFSFNSKSFSIPFPQ

Homology

[Close]

BLAST of MELO.jh102003.1 vs. NCBI nr
Match: KAA0031853.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 642 bits (1657), Expect = 3.24e-230
Identity = 324/344 (94.19%), Postives = 330/344 (95.93%), Query Frame = 0


Query: 13  VKAPRRHP-GLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVP-- 72
           VKAPR+HP GLLQPLSVPGWKWESVSMDFITGLPKTL+GYTVIWVVVDRLTKSAHFVP  
Sbjct: 31  VKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGK 90

Query: 73  EIHLHRKGAAIY-DEIVRLHGVPVSITSDRDARFTSKFWKGLQLALGTRLDFSTAFHPQT 132
             H   K   +Y  EIVRLHGVPVSI SDRDARFTSKFWKGLQLALGTRLDFSTAFHPQT
Sbjct: 91  STHTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQT 150

Query: 133 DGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRS 192
           DGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRS
Sbjct: 151 DGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRS 210

Query: 193 PVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFL 252
           PVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFL
Sbjct: 211 PVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFL 270

Query: 253 KVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLRKYV 312
           KVAPM+GVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLRKYV
Sbjct: 271 KVAPMRGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLRKYV 330

Query: 313 ADPTHVVDFEPLQVSENLSYEEQPVEVLAREVKKLRSREIPLVE 352
           ADPTHVVDFEPLQ+SENLSYEEQPVEVLAREVKKLRSREIPLV+
Sbjct: 331 ADPTHVVDFEPLQISENLSYEEQPVEVLAREVKKLRSREIPLVK 374

[Close]

BLAST of MELO.jh102003.1 vs. NCBI nr
Match: KAA0033485.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 641 bits (1654), Expect = 1.21e-228
Identity = 326/371 (87.87%), Postives = 339/371 (91.37%), Query Frame = 0


Query: 13  VKAPRRHP-GLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVP-- 72
           VKAPR+HP GLLQPLSVPGWKWESVSMDFITGLPKTL+GYTVIWVVVDRLTKSAHFVP  
Sbjct: 84  VKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGK 143

Query: 73  EIHLHRKGAAIY-DEIVRLHGVPVSITSDRDARFTSKFWKGLQLALGTRLDFSTAFHPQT 132
             +   K   +Y  EIVRLHGVPVSI SDRDARFTSKFWKGLQLALGTRLDFSTAFHPQT
Sbjct: 144 STYTASKWGQLYVAEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQT 203

Query: 133 DGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRS 192
           DGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRS
Sbjct: 204 DGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRS 263

Query: 193 PVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFL 252
           PVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEV DMVFL
Sbjct: 264 PVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVEDMVFL 323

Query: 253 KVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLRKYV 312
           KVAPMKGVLRFAKKGKLSPRF+GPFEILERIGPVAYRLALPPSFAAVHDVFHISML+KYV
Sbjct: 324 KVAPMKGVLRFAKKGKLSPRFIGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLKKYV 383

Query: 313 ADPTHVVDFEPLQVSENLSYEEQPVEVLAREVKKLRSREIPLV----EDEARARASWRAT 372
           ADPTHVVDFEPLQ+SENLSYEEQPVEVLAREVKKLRSREIPLV    ++     A+W+  
Sbjct: 384 ADPTHVVDFEPLQISENLSYEEQPVEVLAREVKKLRSREIPLVKILWQNNGVEEATWKKE 443

Query: 373 RSIPFQFPPTF 375
             +  Q+P  F
Sbjct: 444 EDMRAQYPELF 454

[Close]

BLAST of MELO.jh102003.1 vs. NCBI nr
Match: KAA0032302.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 635 bits (1638), Expect = 6.14e-227
Identity = 324/371 (87.33%), Postives = 336/371 (90.57%), Query Frame = 0


Query: 13  VKAPRRHP-GLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVP-- 72
           VKAPR+HP GLLQPLSVPGWKWESVSMDFITGLPKTL+GYTVIWVVVDRLTKSAHFVP  
Sbjct: 38  VKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGK 97

Query: 73  EIHLHRKGAAIY-DEIVRLHGVPVSITSDRDARFTSKFWKGLQLALGTRLDFSTAFHPQT 132
             +   K   +Y  EIVRLHGVPVSI SDRDARFTSKFWKGLQLALGTRLDFSTAFHPQT
Sbjct: 98  STYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQT 157

Query: 133 DGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRS 192
           DGQTERLNQILEDMLR CVLEF GSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRS
Sbjct: 158 DGQTERLNQILEDMLRVCVLEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRS 217

Query: 193 PVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFL 252
           PVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFL
Sbjct: 218 PVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFL 277

Query: 253 KVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLRKYV 312
           KVAPMKGVLRFAKKGKLSPRFVG FEILE+IGPVAYRLALPPSFAAVH+VFHISMLRKYV
Sbjct: 278 KVAPMKGVLRFAKKGKLSPRFVGLFEILEQIGPVAYRLALPPSFAAVHEVFHISMLRKYV 337

Query: 313 ADPTHVVDFEPLQVSENLSYEEQPVEVLAREVKKLRSREIPLV----EDEARARASWRAT 372
           ADPTHVVDFEPLQ+SENLSYEEQPVEVLAREVKKLRSREIPLV    ++     A+W   
Sbjct: 338 ADPTHVVDFEPLQISENLSYEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEATWEKE 397

Query: 373 RSIPFQFPPTF 375
             +  Q+P  F
Sbjct: 398 EDMRAQYPELF 408

[Close]

BLAST of MELO.jh102003.1 vs. NCBI nr
Match: KAA0047851.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 647 bits (1669), Expect = 8.21e-226
Identity = 331/371 (89.22%), Postives = 339/371 (91.37%), Query Frame = 0


Query: 13  VKAPRRHP-GLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVP-- 72
           VKAPR+HP GLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVP  
Sbjct: 424 VKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGK 483

Query: 73  EIHLHRKGAAIY-DEIVRLHGVPVSITSDRDARFTSKFWKGLQLALGTRLDFSTAFHPQT 132
             +   K   +Y  EIVRLHGVPVSI SDRDARFTSKFWKGLQLALGTRLDFSTAFHPQT
Sbjct: 484 STYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQT 543

Query: 133 DGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRS 192
           DGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRS
Sbjct: 544 DGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRS 603

Query: 193 PVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFL 252
           PVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFL
Sbjct: 604 PVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFL 663

Query: 253 KVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLRKYV 312
           KVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLRKYV
Sbjct: 664 KVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLRKYV 723

Query: 313 ADPTHVVDFEPLQVSENLSYEEQPVEVLAREVKKLRSREIPLV----EDEARARASWRAT 372
           ADPTHVVDFEPLQVSENLSYEEQPVEVLAREVKKLRSREIPLV    ++     A+W   
Sbjct: 724 ADPTHVVDFEPLQVSENLSYEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEATWEKE 783

Query: 373 RSIPFQFPPTF 375
             +  Q+P  F
Sbjct: 784 EDMRAQYPELF 794

[Close]

BLAST of MELO.jh102003.1 vs. NCBI nr
Match: KAA0040942.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 637 bits (1643), Expect = 1.05e-221
Identity = 325/371 (87.60%), Postives = 336/371 (90.57%), Query Frame = 0


Query: 13  VKAPRRHP-GLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVP-- 72
           VKAPR+HP GLLQPLSVPGWKWESVSMDFITGLPKTL+G+TVIWVVVDRLTKSAHFVP  
Sbjct: 436 VKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGHTVIWVVVDRLTKSAHFVPGK 495

Query: 73  EIHLHRKGAAIY-DEIVRLHGVPVSITSDRDARFTSKFWKGLQLALGTRLDFSTAFHPQT 132
             +   K   +Y  EIVRLHGVPVSI SDRDARFTSKFWKGLQLALGTRLDFSTAFHPQT
Sbjct: 496 STYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQT 555

Query: 133 DGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRS 192
           DGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRS
Sbjct: 556 DGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRS 615

Query: 193 PVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFL 252
           PVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFL
Sbjct: 616 PVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFL 675

Query: 253 KVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLRKYV 312
           KVAPMKGVLRFAKKGKLSPRFVG FEILERIGPVAYRLALPPSFA VHDVFHISMLRKYV
Sbjct: 676 KVAPMKGVLRFAKKGKLSPRFVGSFEILERIGPVAYRLALPPSFAVVHDVFHISMLRKYV 735

Query: 313 ADPTHVVDFEPLQVSENLSYEEQPVEVLAREVKKLRSREIPLV----EDEARARASWRAT 372
           ADPTHVVDFEPLQ+SENLSYEEQPVEVLAREVKKL SREIPLV    ++     A+W   
Sbjct: 736 ADPTHVVDFEPLQISENLSYEEQPVEVLAREVKKLHSREIPLVKILWQNHGVEEATWEKE 795

Query: 373 RSIPFQFPPTF 375
             +  Q+P  F
Sbjct: 796 EDMRAQYPELF 806

[Close]

BLAST of MELO.jh102003.1 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 164.5 bits (415), Expect = 2.5e-39
Identity = 109/319 (34.17%), Postives = 162/319 (50.78%), Query Frame = 0


Query: 16   PRRHPGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFV---PEIH 75
            PR H GLLQPL +   +W  +SMDF+TGLP T     +I VVVDR +K AHF+     + 
Sbjct: 1153 PRLH-GLLQPLPIAEGRWLDISMDFVTGLPPTSNNLNMILVVVDRFSKRAHFIATRKTLD 1212

Query: 76   LHRKGAAIYDEIVRLHGVPVSITSDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQT 135
              +    ++  I   HG P +ITSDRD R T+  ++ L   LG +   S+A HPQTDGQ+
Sbjct: 1213 ATQLIDLLFRYIFSYHGFPRTITSDRDVRMTADKYQELTKRLGIKSTMSSANHPQTDGQS 1272

Query: 136  ERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCW 195
            ER  Q L  +LRA       +W  +L  +EF YN++   T+G +PFE   G    +P   
Sbjct: 1273 ERTIQTLNRLLRAYASTNIQNWHVYLPQIEFVYNSTPTRTLGKSPFEIDLGYLPNTPAIK 1332

Query: 196  G--EVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKV 255
               EV  +     EL +   A   + + ++  AQ   ++  + RRK L   +GD V +  
Sbjct: 1333 SDDEVNARSFTAVELAKHLKALTIQTKEQLEHAQIEMETNNNQRRKPLLLNIGDHVLVHR 1392

Query: 256  APMKGVLRFAKKG---KLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLRKY 315
                    + KKG   K+   +VGPF ++++I   AY L L  S    H V ++  L+K+
Sbjct: 1393 D------AYFKKGAYMKVQQIYVGPFRVVKKINDNAYELDL-NSHKKKHRVINVQFLKKF 1452

Query: 316  VADPTHVVDFEPLQVSENL 327
            V  P      +P+  +E +
Sbjct: 1453 VYRPDAYPKNKPISSTERI 1463

[Close]

BLAST of MELO.jh102003.1 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 5.5e-39
Identity = 104/293 (35.49%), Postives = 149/293 (50.85%), Query Frame = 0


Query: 21   GLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVP---EIHLHRKG 80
            G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A  VP    I   +  
Sbjct: 972  GPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTA 1031

Query: 81   AAIYDEIVRLHGVPVSITSDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQ 140
                  ++   G P  I +D D  FTS+ WK         + FS  + PQTDGQTER NQ
Sbjct: 1032 RMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQ 1091

Query: 141  ILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVG 200
             +E +LR        +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+ 
Sbjct: 1092 TVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPL---ELP 1151

Query: 201  EQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKG 260
                   E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G
Sbjct: 1152 SFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTG 1211

Query: 261  VLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAV-HDVFHISMLRKY 308
             L   K  KL+P F GPF +L++ GP  Y L LP S   +    FH+S L KY
Sbjct: 1212 FLH--KSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of MELO.jh102003.1 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 5.5e-39
Identity = 104/293 (35.49%), Postives = 149/293 (50.85%), Query Frame = 0


Query: 21   GLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVP---EIHLHRKG 80
            G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A  VP    I   +  
Sbjct: 972  GPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTA 1031

Query: 81   AAIYDEIVRLHGVPVSITSDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQ 140
                  ++   G P  I +D D  FTS+ WK         + FS  + PQTDGQTER NQ
Sbjct: 1032 RMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQ 1091

Query: 141  ILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVG 200
             +E +LR        +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+ 
Sbjct: 1092 TVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPL---ELP 1151

Query: 201  EQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKG 260
                   E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G
Sbjct: 1152 SFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTG 1211

Query: 261  VLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAV-HDVFHISMLRKY 308
             L   K  KL+P F GPF +L++ GP  Y L LP S   +    FH+S L KY
Sbjct: 1212 FLH--KSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of MELO.jh102003.1 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 5.5e-39
Identity = 104/293 (35.49%), Postives = 149/293 (50.85%), Query Frame = 0


Query: 21   GLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVP---EIHLHRKG 80
            G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A  VP    I   +  
Sbjct: 972  GPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTA 1031

Query: 81   AAIYDEIVRLHGVPVSITSDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQ 140
                  ++   G P  I +D D  FTS+ WK         + FS  + PQTDGQTER NQ
Sbjct: 1032 RMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQ 1091

Query: 141  ILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVG 200
             +E +LR        +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+ 
Sbjct: 1092 TVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPL---ELP 1151

Query: 201  EQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKG 260
                   E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G
Sbjct: 1152 SFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTG 1211

Query: 261  VLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAV-HDVFHISMLRKY 308
             L   K  KL+P F GPF +L++ GP  Y L LP S   +    FH+S L KY
Sbjct: 1212 FLH--KSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of MELO.jh102003.1 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 5.5e-39
Identity = 104/293 (35.49%), Postives = 149/293 (50.85%), Query Frame = 0


Query: 21   GLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVP---EIHLHRKG 80
            G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A  VP    I   +  
Sbjct: 972  GPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTA 1031

Query: 81   AAIYDEIVRLHGVPVSITSDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQ 140
                  ++   G P  I +D D  FTS+ WK         + FS  + PQTDGQTER NQ
Sbjct: 1032 RMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQ 1091

Query: 141  ILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVG 200
             +E +LR        +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+ 
Sbjct: 1092 TVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPL---ELP 1151

Query: 201  EQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKG 260
                   E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G
Sbjct: 1152 SFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTG 1211

Query: 261  VLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAV-HDVFHISMLRKY 308
             L   K  KL+P F GPF +L++ GP  Y L LP S   +    FH+S L KY
Sbjct: 1212 FLH--KSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of MELO.jh102003.1 vs. ExPASy TrEMBL
Match: A0A5A7SNM6 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2549G00010 PE=4 SV=1)

HSP 1 Score: 642 bits (1657), Expect = 1.57e-230
Identity = 324/344 (94.19%), Postives = 330/344 (95.93%), Query Frame = 0


Query: 13  VKAPRRHP-GLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVP-- 72
           VKAPR+HP GLLQPLSVPGWKWESVSMDFITGLPKTL+GYTVIWVVVDRLTKSAHFVP  
Sbjct: 31  VKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGK 90

Query: 73  EIHLHRKGAAIY-DEIVRLHGVPVSITSDRDARFTSKFWKGLQLALGTRLDFSTAFHPQT 132
             H   K   +Y  EIVRLHGVPVSI SDRDARFTSKFWKGLQLALGTRLDFSTAFHPQT
Sbjct: 91  STHTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQT 150

Query: 133 DGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRS 192
           DGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRS
Sbjct: 151 DGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRS 210

Query: 193 PVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFL 252
           PVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFL
Sbjct: 211 PVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFL 270

Query: 253 KVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLRKYV 312
           KVAPM+GVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLRKYV
Sbjct: 271 KVAPMRGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLRKYV 330

Query: 313 ADPTHVVDFEPLQVSENLSYEEQPVEVLAREVKKLRSREIPLVE 352
           ADPTHVVDFEPLQ+SENLSYEEQPVEVLAREVKKLRSREIPLV+
Sbjct: 331 ADPTHVVDFEPLQISENLSYEEQPVEVLAREVKKLRSREIPLVK 374

[Close]

BLAST of MELO.jh102003.1 vs. ExPASy TrEMBL
Match: A0A5A7SWE3 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold261G00190 PE=4 SV=1)

HSP 1 Score: 641 bits (1654), Expect = 5.87e-229
Identity = 326/371 (87.87%), Postives = 339/371 (91.37%), Query Frame = 0


Query: 13  VKAPRRHP-GLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVP-- 72
           VKAPR+HP GLLQPLSVPGWKWESVSMDFITGLPKTL+GYTVIWVVVDRLTKSAHFVP  
Sbjct: 84  VKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGK 143

Query: 73  EIHLHRKGAAIY-DEIVRLHGVPVSITSDRDARFTSKFWKGLQLALGTRLDFSTAFHPQT 132
             +   K   +Y  EIVRLHGVPVSI SDRDARFTSKFWKGLQLALGTRLDFSTAFHPQT
Sbjct: 144 STYTASKWGQLYVAEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQT 203

Query: 133 DGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRS 192
           DGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRS
Sbjct: 204 DGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRS 263

Query: 193 PVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFL 252
           PVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEV DMVFL
Sbjct: 264 PVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVEDMVFL 323

Query: 253 KVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLRKYV 312
           KVAPMKGVLRFAKKGKLSPRF+GPFEILERIGPVAYRLALPPSFAAVHDVFHISML+KYV
Sbjct: 324 KVAPMKGVLRFAKKGKLSPRFIGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLKKYV 383

Query: 313 ADPTHVVDFEPLQVSENLSYEEQPVEVLAREVKKLRSREIPLV----EDEARARASWRAT 372
           ADPTHVVDFEPLQ+SENLSYEEQPVEVLAREVKKLRSREIPLV    ++     A+W+  
Sbjct: 384 ADPTHVVDFEPLQISENLSYEEQPVEVLAREVKKLRSREIPLVKILWQNNGVEEATWKKE 443

Query: 373 RSIPFQFPPTF 375
             +  Q+P  F
Sbjct: 444 EDMRAQYPELF 454

[Close]

BLAST of MELO.jh102003.1 vs. ExPASy TrEMBL
Match: A0A5A7SMN8 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G001520 PE=4 SV=1)

HSP 1 Score: 635 bits (1638), Expect = 2.97e-227
Identity = 324/371 (87.33%), Postives = 336/371 (90.57%), Query Frame = 0


Query: 13  VKAPRRHP-GLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVP-- 72
           VKAPR+HP GLLQPLSVPGWKWESVSMDFITGLPKTL+GYTVIWVVVDRLTKSAHFVP  
Sbjct: 38  VKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGK 97

Query: 73  EIHLHRKGAAIY-DEIVRLHGVPVSITSDRDARFTSKFWKGLQLALGTRLDFSTAFHPQT 132
             +   K   +Y  EIVRLHGVPVSI SDRDARFTSKFWKGLQLALGTRLDFSTAFHPQT
Sbjct: 98  STYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQT 157

Query: 133 DGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRS 192
           DGQTERLNQILEDMLR CVLEF GSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRS
Sbjct: 158 DGQTERLNQILEDMLRVCVLEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRS 217

Query: 193 PVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFL 252
           PVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFL
Sbjct: 218 PVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFL 277

Query: 253 KVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLRKYV 312
           KVAPMKGVLRFAKKGKLSPRFVG FEILE+IGPVAYRLALPPSFAAVH+VFHISMLRKYV
Sbjct: 278 KVAPMKGVLRFAKKGKLSPRFVGLFEILEQIGPVAYRLALPPSFAAVHEVFHISMLRKYV 337

Query: 313 ADPTHVVDFEPLQVSENLSYEEQPVEVLAREVKKLRSREIPLV----EDEARARASWRAT 372
           ADPTHVVDFEPLQ+SENLSYEEQPVEVLAREVKKLRSREIPLV    ++     A+W   
Sbjct: 338 ADPTHVVDFEPLQISENLSYEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEATWEKE 397

Query: 373 RSIPFQFPPTF 375
             +  Q+P  F
Sbjct: 398 EDMRAQYPELF 408

[Close]

BLAST of MELO.jh102003.1 vs. ExPASy TrEMBL
Match: A0A5A7U2S5 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G001160 PE=4 SV=1)

HSP 1 Score: 647 bits (1669), Expect = 3.97e-226
Identity = 331/371 (89.22%), Postives = 339/371 (91.37%), Query Frame = 0


Query: 13  VKAPRRHP-GLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVP-- 72
           VKAPR+HP GLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVP  
Sbjct: 424 VKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGK 483

Query: 73  EIHLHRKGAAIY-DEIVRLHGVPVSITSDRDARFTSKFWKGLQLALGTRLDFSTAFHPQT 132
             +   K   +Y  EIVRLHGVPVSI SDRDARFTSKFWKGLQLALGTRLDFSTAFHPQT
Sbjct: 484 STYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQT 543

Query: 133 DGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRS 192
           DGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRS
Sbjct: 544 DGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRS 603

Query: 193 PVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFL 252
           PVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFL
Sbjct: 604 PVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFL 663

Query: 253 KVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLRKYV 312
           KVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLRKYV
Sbjct: 664 KVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLRKYV 723

Query: 313 ADPTHVVDFEPLQVSENLSYEEQPVEVLAREVKKLRSREIPLV----EDEARARASWRAT 372
           ADPTHVVDFEPLQVSENLSYEEQPVEVLAREVKKLRSREIPLV    ++     A+W   
Sbjct: 724 ADPTHVVDFEPLQVSENLSYEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEATWEKE 783

Query: 373 RSIPFQFPPTF 375
             +  Q+P  F
Sbjct: 784 EDMRAQYPELF 794

[Close]

BLAST of MELO.jh102003.1 vs. ExPASy TrEMBL
Match: A0A5A7TBV4 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold125G001380 PE=4 SV=1)

HSP 1 Score: 637 bits (1643), Expect = 5.07e-222
Identity = 325/371 (87.60%), Postives = 336/371 (90.57%), Query Frame = 0


Query: 13  VKAPRRHP-GLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVP-- 72
           VKAPR+HP GLLQPLSVPGWKWESVSMDFITGLPKTL+G+TVIWVVVDRLTKSAHFVP  
Sbjct: 436 VKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGHTVIWVVVDRLTKSAHFVPGK 495

Query: 73  EIHLHRKGAAIY-DEIVRLHGVPVSITSDRDARFTSKFWKGLQLALGTRLDFSTAFHPQT 132
             +   K   +Y  EIVRLHGVPVSI SDRDARFTSKFWKGLQLALGTRLDFSTAFHPQT
Sbjct: 496 STYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQT 555

Query: 133 DGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRS 192
           DGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRS
Sbjct: 556 DGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRS 615

Query: 193 PVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFL 252
           PVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFL
Sbjct: 616 PVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFL 675

Query: 253 KVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLRKYV 312
           KVAPMKGVLRFAKKGKLSPRFVG FEILERIGPVAYRLALPPSFA VHDVFHISMLRKYV
Sbjct: 676 KVAPMKGVLRFAKKGKLSPRFVGSFEILERIGPVAYRLALPPSFAVVHDVFHISMLRKYV 735

Query: 313 ADPTHVVDFEPLQVSENLSYEEQPVEVLAREVKKLRSREIPLV----EDEARARASWRAT 372
           ADPTHVVDFEPLQ+SENLSYEEQPVEVLAREVKKL SREIPLV    ++     A+W   
Sbjct: 736 ADPTHVVDFEPLQISENLSYEEQPVEVLAREVKKLHSREIPLVKILWQNHGVEEATWEKE 795

Query: 373 RSIPFQFPPTF 375
             +  Q+P  F
Sbjct: 796 EDMRAQYPELF 806

The following BLAST results are available for this feature:

BLAST of MELO.jh102003.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0031853.1	3.24e-230	94.19	pol protein [Cucumis melo var. makuwa]	[more]
KAA0033485.1	1.21e-228	87.87	pol protein [Cucumis melo var. makuwa]	[more]
KAA0032302.1	6.14e-227	87.33	pol protein [Cucumis melo var. makuwa]	[more]
KAA0047851.1	8.21e-226	89.22	pol protein [Cucumis melo var. makuwa]	[more]
KAA0040942.1	1.05e-221	87.60	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of MELO.jh102003.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q99315	2.5e-39	34.17	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q9UR07	5.5e-39	35.49	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	5.5e-39	35.49	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	5.5e-39	35.49	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	5.5e-39	35.49	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of MELO.jh102003.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SNM6	1.57e-230	94.19	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2549G00010 P...	[more]
A0A5A7SWE3	5.87e-229	87.87	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold261G00190 PE...	[more]
A0A5A7SMN8	2.97e-227	87.33	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G001520 P...	[more]
A0A5A7U2S5	3.97e-226	89.22	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G001160 P...	[more]
A0A5A7TBV4	5.07e-222	87.60	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold125G001380 P...	[more]

BLAST of MELO.jh102003.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 23..226 e-value: 3.2E-42 score: 146.1
None	No IPR available	PANTHER	PTHR46148:SF18	IPP TRANSFERASE	coord: 139..343
None	No IPR available	PANTHER	PTHR46148	FAMILY NOT NAMED	coord: 139..343
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 25..185 score: 16.335447
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 26..182

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO.jh102003.1.t1	MELO.jh102003.1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding