Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAATAGGCTTACTAAAAGCTAAAACTAAAAAATGGCAAAAACTAGTACGGTTGTTTTCTTTATGTGCATTGTTGTTGTGGTGGGATCACTGCAATTCTCTAGGGCAGACATGACAGCTGAAAGGGACACTGAGATTGAGATGAGATCTAAGTTGTTGCAGAGCGAAATATCCAACGTAATGCCTCAATTCAAATCATGTGTAGAAACCTGCGCGAAAGCATGCATTGCAAAAGACAGTGCCAACACATCGTGTCATTCTACATGTGATAAAGATTGCATGAAAAAGGAAGTTGTTGGTATTGTCTTGAATCTTTGGAGAAATGTTTTTTTTTAACCAAGACGATAAATAATTTTTTTTGTGTGCGGTCAATTTTAGTTGCGAGGCAAACTTCACTTTTATTATGGAAATTAGTGAGTTTTGTAAGGTAAGGTCGGTACGTGTTCCATACTTTAATATAGTTTTGCTGCTAGAATTTGAAGGGATATGAGATAATTGAAAATTTAGAATGAGAA
mRNA sequence
AAAATAGGCTTACTAAAAGCTAAAACTAAAAAATGGCAAAAACTAGTACGGTTGTTTTCTTTATGTGCATTGTTGTTGTGGTGGGATCACTGCAATTCTCTAGGGCAGACATGACAGCTGAAAGGGACACTGAGATTGAGATGAGATCTAAGTTGTTGCAGAGCGAAATATCCAACGTAATGCCTCAATTCAAATCATGTGTAGAAACCTGCGCGAAAGCATGCATTGCAAAAGACAGTGCCAACACATCGTGTCATTCTACATGTGATAAAGATTGCATGAAAAAGGAAGTTGTTGGTATTGTCTTGAATCTTTGGAGAAATGTTTTTTTTTAACCAAGACGATAAATAATTTTTTTTGTGTGCGGTCAATTTTAGTTGCGAGGCAAACTTCACTTTTATTATGGAAATTAGTGAGTTTTGTAAGGTAAGGTCGGTACGTGTTCCATACTTTAATATAGTTTTGCTGCTAGAATTTGAAGGGATATGAGATAATTGAAAATTTAGAATGAGAA
Coding sequence (CDS)
ATGGCAAAAACTAGTACGGTTGTTTTCTTTATGTGCATTGTTGTTGTGGTGGGATCACTGCAATTCTCTAGGGCAGACATGACAGCTGAAAGGGACACTGAGATTGAGATGAGATCTAAGTTGTTGCAGAGCGAAATATCCAACGTAATGCCTCAATTCAAATCATGTGTAGAAACCTGCGCGAAAGCATGCATTGCAAAAGACAGTGCCAACACATCGTGTCATTCTACATGTGATAAAGATTGCATGAAAAAGGAAGTTGTTGGTATTGTCTTGAATCTTTGGAGAAATGTTTTTTTTTAA
Protein sequence
MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETCAKACIAKDSANTSCHSTCDKDCMKKEVVGIVLNLWRNVFF
Homology
BLAST of MELO.jh034551.1 vs. NCBI nr
Match:
KAA0035393.1 (major pollen allergen Ole e 6-like [Cucumis melo var. makuwa])
HSP 1 Score: 177 bits (449), Expect = 1.20e-55
Identity = 90/94 (95.74%), Postives = 92/94 (97.87%), Query Frame = 0
Query: 1 MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC 60
MAKTSTVVFFMCIVVVVGSLQFSRADMTA+RDTEIEMRSKLLQSEIS+VMPQFKSCVETC
Sbjct: 1 MAKTSTVVFFMCIVVVVGSLQFSRADMTADRDTEIEMRSKLLQSEISSVMPQFKSCVETC 60
Query: 61 AKACIAKDSANTSCHSTCDKDCMKKEVVGIVLNL 94
KACIAKD ANTSCHSTCDKDCMKKEVVGIVLNL
Sbjct: 61 EKACIAKDGANTSCHSTCDKDCMKKEVVGIVLNL 94
BLAST of MELO.jh034551.1 vs. NCBI nr
Match:
KAA0036015.1 (major pollen allergen Ole e 6-like [Cucumis melo var. makuwa])
HSP 1 Score: 171 bits (432), Expect = 5.48e-53
Identity = 86/88 (97.73%), Postives = 88/88 (100.00%), Query Frame = 0
Query: 1 MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC 60
MAK+ST+VFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC
Sbjct: 1 MAKSSTIVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC 60
Query: 61 AKACIAKDSANTSCHSTCDKDCMKKEVV 88
AKACIAKDSANTSCHSTCDKDCMKKEVV
Sbjct: 61 AKACIAKDSANTSCHSTCDKDCMKKEVV 88
BLAST of MELO.jh034551.1 vs. NCBI nr
Match:
KAE8637567.1 (hypothetical protein CSA_017844, partial [Cucumis sativus])
HSP 1 Score: 77.4 bits (189), Expect = 6.94e-16
Identity = 41/89 (46.07%), Postives = 55/89 (61.80%), Query Frame = 0
Query: 3 KTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQ-SEISNVMPQFKSCVETCA 62
K VVFFMCIVV+ GSLQFS+A TA +++ K+ +E + PQ +SCV TC
Sbjct: 20 KNIMVVFFMCIVVM-GSLQFSKAQTTANMSPDLQAAEKIKSIAEGMKLWPQMESCVLTCR 79
Query: 63 KACIAKDSANTSCHSTCDKDCMKKEVVGI 90
K C AK +AN SCH C+ DC +K + +
Sbjct: 80 KECDAKGNANASCHQKCNNDCTEKTIASV 107
BLAST of MELO.jh034551.1 vs. NCBI nr
Match:
KAG6595593.1 (hypothetical protein SDJN03_12146, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 65.5 bits (158), Expect = 1.93e-11
Identity = 41/87 (47.13%), Postives = 49/87 (56.32%), Query Frame = 0
Query: 1 MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC 60
MAK V MC V+VV +LQFS TA++ TE+E + K S+ V +FKSC TC
Sbjct: 1 MAKKMMAVVLMC-VLVVSALQFS----TADKSTEMEAKFKSFFSDFGTVEAKFKSCAATC 60
Query: 61 AKACIAKDSANTSCHSTCDKDCMKKEV 87
K C N SC S CD DC KKEV
Sbjct: 61 QKKC-----TNASCRSKCDADCGKKEV 77
BLAST of MELO.jh034551.1 vs. NCBI nr
Match:
KAG6595587.1 (hypothetical protein SDJN03_12140, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 65.1 bits (157), Expect = 3.02e-11
Identity = 39/87 (44.83%), Postives = 49/87 (56.32%), Query Frame = 0
Query: 1 MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC 60
MAK V MC V++V +LQFS AD AE +E R K ++S V + KSC TC
Sbjct: 1 MAKKMMAVLLMC-VLLVSALQFSTADSPAE----MEARFKSFFGDLSGVEAKLKSCAATC 60
Query: 61 AKACIAKDSANTSCHSTCDKDCMKKEV 87
K C+AK + SC C+ DC KKEV
Sbjct: 61 EKECVAKGETSESCKPKCNTDCGKKEV 82
BLAST of MELO.jh034551.1 vs. ExPASy TrEMBL
Match:
A0A5A7SXV7 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13030G00010 PE=4 SV=1)
HSP 1 Score: 177 bits (449), Expect = 5.79e-56
Identity = 90/94 (95.74%), Postives = 92/94 (97.87%), Query Frame = 0
Query: 1 MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC 60
MAKTSTVVFFMCIVVVVGSLQFSRADMTA+RDTEIEMRSKLLQSEIS+VMPQFKSCVETC
Sbjct: 1 MAKTSTVVFFMCIVVVVGSLQFSRADMTADRDTEIEMRSKLLQSEISSVMPQFKSCVETC 60
Query: 61 AKACIAKDSANTSCHSTCDKDCMKKEVVGIVLNL 94
KACIAKD ANTSCHSTCDKDCMKKEVVGIVLNL
Sbjct: 61 EKACIAKDGANTSCHSTCDKDCMKKEVVGIVLNL 94
BLAST of MELO.jh034551.1 vs. ExPASy TrEMBL
Match:
A0A5A7T3F9 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold494G00090 PE=4 SV=1)
HSP 1 Score: 171 bits (432), Expect = 2.65e-53
Identity = 86/88 (97.73%), Postives = 88/88 (100.00%), Query Frame = 0
Query: 1 MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC 60
MAK+ST+VFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC
Sbjct: 1 MAKSSTIVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC 60
Query: 61 AKACIAKDSANTSCHSTCDKDCMKKEVV 88
AKACIAKDSANTSCHSTCDKDCMKKEVV
Sbjct: 61 AKACIAKDSANTSCHSTCDKDCMKKEVV 88
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0035393.1 | 1.20e-55 | 95.74 | major pollen allergen Ole e 6-like [Cucumis melo var. makuwa] | [more] |
KAA0036015.1 | 5.48e-53 | 97.73 | major pollen allergen Ole e 6-like [Cucumis melo var. makuwa] | [more] |
KAE8637567.1 | 6.94e-16 | 46.07 | hypothetical protein CSA_017844, partial [Cucumis sativus] | [more] |
KAG6595593.1 | 1.93e-11 | 47.13 | hypothetical protein SDJN03_12146, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG6595587.1 | 3.02e-11 | 44.83 | hypothetical protein SDJN03_12140, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7SXV7 | 5.79e-56 | 95.74 | Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C... | [more] |
A0A5A7T3F9 | 2.65e-53 | 97.73 | Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C... | [more] |
Match Name | E-value | Identity | Description | |