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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonstart_codonCDSpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below. AGCCAATCAAAAACAAATTCCTTTTGTTTCTTAATCTTCGAAAGTTATGGGTAGGAGAGAGAGAGAAATTAGAGATACTGATGCTAACCTGGCGATGATTGGGATTGAAGGATTCAAACTGATTGACAAATTCTTCGGTCGAGCCTCGAAGGGTAGAAGGGTGGCGGCAACGAGAGGCCAGCTCAGCATCAGCCACCGCGTAAGGTGGATCAACCACCTTTGAAGACGAAAGAGAAACAGGCCGGGGCGGTGGTGACTTCCGATCAGTTGGCCAAAACCCGCGGCGGGATCGTGATAACAACTTGGCGTTCTTATGCAAAACGGAAATAGCTTTCGTTTTTCTCTACATAACTAGTGGATGGATGCTCATAATATATAAAGAAATATAGATACTTAACTACAAGCCTGCAGTATAGAAATAAATAGAGATATGGGATATATATATATATATATAGATATAGATAGATAGATATGAAGTATGTGTATGGGGTACTTAGCTATAGCTTGGTTATGTTGTTTTTCTTGGGCTCTTTAGTAATATCAAAAAGTATGCATGTTTTGAGTTAAGTTGAGTGAGTTGCATGTCACACCTCTTCATCTTAATTCAATTTCACCTAAAA mRNA sequence AGCCAATCAAAAACAAATTCCTTTTGTTTCTTAATCTTCGAAAGTTATGGGTAGGAGAGAGAGAGAAATTAGAGATACTGATGCTAACCTGGCGATGATTGGGATTGAAGGATTCAAACTGATTGACAAATTCTTCGGTCGAGCCTCGAAGGGTAGAAGGGTGGCGGCAACGAGAGGCCAGCTCAGCATCAGCCACCGCGTAAGGTGGATCAACCACCTTTGAAGACGAAAGAGAAACAGGCCGGGGCGGTGGTGACTTCCGATCAGTTGGCCAAAACCCGCGGCGGGATCGTGATAACAACTTGGCGTTCTTATGCAAAACGGAAATAGCTTTCGTTTTTCTCTACATAACTAGTGGATGGATGCTCATAATATATAAAGAAATATAGATACTTAACTACAAGCCTGCAGTATAGAAATAAATAGAGATATGGGATATATATATATATATATAGATATAGATAGATAGATATGAAGTATGTGTATGGGGTACTTAGCTATAGCTTGGTTATGTTGTTTTTCTTGGGCTCTTTAGTAATATCAAAAAGTATGCATGTTTTGAGTTAAGTTGAGTGAGTTGCATGTCACACCTCTTCATCTTAATTCAATTTCACCTAAAA Coding sequence (CDS) ATGGGTAGGAGAGAGAGAGAAATTAGAGATACTGATGCTAACCTGGCGATGATTGGGATTGAAGGATTCAAACTGATTGACAAATTCTTCGGTCGAGCCTCGAAGGGTAGAAGGGTGGCGGCAACGAGAGGCCAGCTCAGCATCAGCCACCGCGTAAGGTGGATCAACCACCTTTGA Protein sequence MGRREREIRDTDANLAMIGIEGFKLIDKFFGRASKGRRVAATRGQLSISHRVRWINHL
Homology
BLAST of MELO.jh028206.1 vs. NCBI nr
Match: KGN47421.1 (hypothetical protein Csa_021737 [Cucumis sativus]) HSP 1 Score: 69.3 bits (168), Expect = 1.57e-13 Identity = 37/43 (86.05%), Postives = 37/43 (86.05%), Query Frame = 0
Query: 1 MGRREREIRDTDANLAMIGIEGFKLIDKFFGRASK--GRRVAA 41
MGRREREI DTDANLA IGIEGFKLIDKFFGRAS GRRV A
Sbjct: 1 MGRREREIIDTDANLARIGIEGFKLIDKFFGRASTTGGRRVVA 43
BLAST of MELO.jh028206.1 vs. NCBI nr
Match: KGN47422.1 (hypothetical protein Csa_021740 [Cucumis sativus]) HSP 1 Score: 47.4 bits (111), Expect = 6.28e-05 Identity = 25/40 (62.50%), Postives = 31/40 (77.50%), Query Frame = 0
Query: 4 REREIRDTDANLAMIGIEGFKLIDKFFGRASK--GRRVAA 41
REREIR + +LA IG EGF++ID++FGRAS RRVAA
Sbjct: 5 REREIRGSRGDLAKIGREGFQIIDEYFGRASSTGARRVAA 44
BLAST of MELO.jh028206.1 vs. ExPASy TrEMBL
Match: A0A0A0KI19 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G318680 PE=4 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 7.59e-14 Identity = 37/43 (86.05%), Postives = 37/43 (86.05%), Query Frame = 0
Query: 1 MGRREREIRDTDANLAMIGIEGFKLIDKFFGRASK--GRRVAA 41
MGRREREI DTDANLA IGIEGFKLIDKFFGRAS GRRV A
Sbjct: 1 MGRREREIIDTDANLARIGIEGFKLIDKFFGRASTTGGRRVVA 43
BLAST of MELO.jh028206.1 vs. ExPASy TrEMBL
Match: A0A0A0KG95 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G318690 PE=4 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 3.04e-05 Identity = 25/40 (62.50%), Postives = 31/40 (77.50%), Query Frame = 0
Query: 4 REREIRDTDANLAMIGIEGFKLIDKFFGRASK--GRRVAA 41
REREIR + +LA IG EGF++ID++FGRAS RRVAA
Sbjct: 5 REREIRGSRGDLAKIGREGFQIIDEYFGRASSTGARRVAA 44
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KGN47421.1 | 1.57e-13 | 86.05 | hypothetical protein Csa_021737 [Cucumis sativus] | [more] |
| KGN47422.1 | 6.28e-05 | 62.50 | hypothetical protein Csa_021740 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0KI19 | 7.59e-14 | 86.05 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G318680 PE=4 SV=1 | [more] |
| A0A0A0KG95 | 3.04e-05 | 62.50 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G318690 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
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