MELO.jh024932.1 (gene) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonstart_codonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CTCTTAAAAACCCTAAAAGAAAAACCCTAACCCCTCAATCAACCCGCCGCCACTCTCCTCCGTCCAGTAGCCACCGCGAGTCACTGTCGGCCGCCGCATCTTCTTCGTCAATCGAAGCCTAGCCGCGCATCCCAATCATTCGACAGTCACGTCGTCGTTCGCAGCCGATCATCCGCATCCGCCGCTCTCCTCTGCCGTCAGTCGCTGCCCCAACCCCAACCCGCGTGAATCCGTATCGTGCAGCCAACCCGAGCCAATCTACTACCCCGAGCTTCCACCCGCAGATTCGAGGTGAGCCTTACCGCCGTCAGCGTCTTCATCTATATTTCGTGTGTCGCCGATAAAGCCTAGCTGCGTCAGCCATCCGTCGAAGCTCTTCCGTCGCAGCCGTGAGCAAGCATGTGCAAGCTACCATTCCCAACCGCGCTTTATCTTTTAGTCGTGAAGATCGAGCCTCGCCTTCGCCTGAGCCACGCCAGCCACCCGCACCTTCGCCCGAGCTGCGCCAGCCACCCGCATGAATCCGAGACGCGCCCCAGCCGTTGACCTTCAGCCGAGCCGTTTCCCTATCAAATCGAGCCGCCTGTTTTCCTTCAACTAAGCCACCTAGGTAGTTTTTCCCCTAGTCAAGCCATATTGAGCCACCAAGCTTATTTTTGGCTTTTTACCTATTTTTGGTAAGTTTGAGTTGGGTTTTGGTTAGTGCCCGACAAATATTGATTTTGGATCCTAGATAATTTAATTATGGATTTAACTGAATTTTTTTATGATAGATCAATTGGAAGTTGAACTGTGGAACCTTGTCCTAAATTAAGGTAAATTAAGGTTGAGTTGGATCCGACCTCCACTTTGAGTAAGTTGAATTAACTTGATTTTTTTTATCCTAAATTAACTGCAAATTTAGTTATTTTCTTAGCATTTTACCCTTAATGTTTAGGATCTTTCTTGGGAAGCTTGACCTAGCTGTAATGATTTTAATTCTTTCGATTAAACTAATCTCCAAGTAAGAGATTTTACGACTAGACTTTCGACTGAAATTAAAAGATCACATGTGTGTATGGTTATGCATGGACGATAGCTTATTTGCATAACTCGATGTTATTTATTATGACTGACATTGTATTGATGTTTGATGTTGATGACTGATGTCATGTTATGACTGGTAGTATGTTGATGAAGACGACTGCATTATGCTTATGATTAAGATATTTGGATAAGTATGTTATGATTGTTATGTCATGCATGCCATGTTTATGATAATATTATGACACGTTACATGCTATGGATAGGGTATATTGTTAGCTTCACCTATTAGAGTCGTACCCACATGGGTGTCCCTCGAGATCACCACCTTTTATGATTGTGTAGCTCGACGGGATCACCAGTCCACTATGACATTGACATAGACATGATTATGAGTGATTTGACGGGGTCACTCACAGTCCGATTGTCTTAGTGTTCCCTTTGGGTACATTAAAGACAATTTTGTTCTAGATGTTCCTTTGGGTTCACCGAGGACCAGATATATTCCTACGGGACCACAAATTGCATGTGTATGGGAACGTGCTAGTTCAGAGGTACTACCTTTACAGGACTCTAATAGGAAGTTAACATACACCTAGCAGGACTAGTAGTGGGTCCCTTATTGAGTTTATTTTATGCTCACTTTTTCTTGTTTAATTTTACAGGTAAGAGTAGAGGGAAGCTGGTGAATGACAAAAAGTGACCGTGGCGAGCCATAGGGATCATTATTGCTTTCGCTTTATGTCGTTTGATCTGATGCATTATTTTATTTTATTTTATTTAAAACTAGATAGGGCCCGAGTTAAGATTTTGTTAAATTTTATCTTTAAAATATTTGTTTATGATTTTAATAAGTATTTGAGGTTTTGTTTTATTTTCTATTTTTTTTATTTAAGAAATTTTATTATCTTTTTAATTAGTAATGGCCTCAGCTTAGTATAAGGAGTTGGATCGTTACACGGTGCTTCTTCTCATATATGCCATGACAAATCCTTGTTTAATAAGCTTCACAGTATCAAAATATGATAGTCATACTGCTTACTAAAGTCCGTCTAAAAGTTGAGTACACATGTGACATTCCAATAGCAAAACAAGTGATTTTAAAATATGTTTTTTACACTCCTGAATTCAATACAATTTACTGTCATGAGTGCTCTTCTTAAGGATAAGAGATATTCTATATCCTTCACTAACTCTAATTGTATCATTCAGGACAAGTCACAGTTTCAAAAATGATTGGGAAGATTAAATTAATCAGTGGACTCTACTTGCTCAGAATAAAGGACGATAAGAGTAAAGAGTTTTCTACTCGATCTACTGCATTACTATGTAAAGCATCCACAACCACATGGCATAAACGCATGGGACACCCCTCTATCAATAAAATAAAAGAATTGTCCAAAAGGATAGAGATTTCCGATTCTTTGAATTGTAAAGAAACTTGTCATGTTTGTCTCTTAGCTAAACAGAAACGTCTTTCATTTCCAGCCTTGAATAATGTTGCTGAAAACATATTTGACCTTGTGCATTGTGGCATATGGGGTCCTTTTAAAACTCAAACTCATGTAGGTCATTCTTATTTTGCTACCATAGTTGATGATAAGTTAAGATATACTTGGGTTCATCTTTTGAGAAATAAAAACAATATTCTACAA CTCTTAAAAACCCTAAAAGAAAAACCCTAACCCCTCAATCAACCCGCCGCCACTCTCCTCCGTCCAGTAGCCACCGCGAGTCACTGTCGGCCGCCGCATCTTCTTCGTCAATCGAAGCCTAGCCGCGCATCCCAATCATTCGACAGTCACGTCGTCGTTCGCAGCCGATCATCCGCATCCGCCGCTCTCCTCTGCCGTCAGTCGCTGCCCCAACCCCAACCCGCGTGAATCCGTATCGTGCAGCCAACCCGAGCCAATCTACTACCCCGAGCTTCCACCCGCAGATTCGAGGTGAGCCTTACCGCCGTCAGCGTCTTCATCTATATTTCGTGTGTCGCCGATAAAGCCTAGCTGCGTCAGCCATCCGTCGAAGCTCTTCCGTCGCAGCCGTGAGCAAGCATGTGCAAGCTACCATTCCCAACCGCGCTTTATCTTTTAGTCGTGAAGATCGAGCCTCGCCTTCGCCTGAGCCACGCCAGCCACCCGCACCTTCGCCCGAGCTGCGCCAGCCACCCGCATGAATCCGAGACGCGCCCCAGCCGTTGACCTTCAGCCGAGCCGTTTCCCTATCAAATCGAGCCGCCTGTTTTCCTTCAACTAAGCCACCTAGGTAGTTTTTCCCCTAGTCAAGCCATATTGAGCCACCAAGCTTATTTTTGGCTTTTTACCTATTTTTGATCAATTGGAAGTTGAACTGTGGAACCTTGTCCTAAATTAAGGTAAATTAAGGTTGAGTTGGATCCGACCTCCACTTTGAGTAAGTTGAATTAACTTGATTTTTTTTATCCTAAATTAACTGCAAATTTAGTTATTTTCTTAGCATTTTACCCTTAATGTTTAGGATCTTTCTTGGGAAGCTTGACCTAGCTGTAATGATTTTAATTCTTTCGATTAAACTAATCTCCAAGTAAGAGATTTTACGACTAGACTTTCGACTGAAATTAAAAGATCACATGTGTGTATGGTTATGCATGGACGATAGCTTATTTGCATAACTCGATGTTATTTATTATGACTGACATTGTATTGATGTTTGATGTTGATGACTGATGTCATGTTATGACTGGTAGTATGTTGATGAAGACGACTGCATTATGCTTATGATTAAGATATTTGGATAAGTATGTTATGATTGTTATGTCATGCATGCCATGTTTATGATAATATTATGACACGTTACATGCTATGGATAGGGTATATTGTTAGCTTCACCTATTAGAGTCGTACCCACATGGGTGTCCCTCGAGATCACCACCTTTTATGATTGTGTAGCTCGACGGGATCACCAGTCCACTATGACATTGACATAGACATGATTATGAGTGATTTGACGGGGTCACTCACAGTCCGATTGTCTTAGTGTTCCCTTTGGGTACATTAAAGACAATTTTGTTCTAGATGTTCCTTTGGGTTCACCGAGGACCAGATATATTCCTACGGGACCACAAATTGCATGTGTATGGGAACGTGCTAGTTCAGAGGTACTACCTTTACAGGACTCTAATAGGAAGTTAACATACACCTAGCAGGACTAGTAGTGGGTCCCTTATTGAGTTTATTTTATGCTCACTTTTTCTTGTTTAATTTTACAGGTAAGAGTAGAGGGAAGCTGGTGAATGACAAAAAGTGACCGTGGCGAGCCATAGGGATCATTATTGCTTTCGCTTTATGTCGTTTGATCTGATGCATTATTTTATTTTATTTTATTTAAAACTAGATAGGGCCCGAGTTAAGATTTTGTTAAATTTTATCTTTAAAATATTTGTTTATGATTTTAATAAGTATTTGAGGTTTTGTTTTATTTTCTATTTTTTTTATTTAAGAAATTTTATTATCTTTTTAATTAGTAATGGCCTCAGCTTAGTATAAGGAGTTGGATCGTTACACGGTGCTTCTTCTCATATATGCCATGACAAATCCTTGTTTAATAAGCTTCACAGTATCAAAATATGATAGTCATACTGCTTACTAAAGTCCGTCTAAAAGTTGAGTACACATGTGACATTCCAATAGCAAAACAAGTGATTTTAAAATATGTTTTTTACACTCCTGAATTCAATACAATTTACTGTCATGAGTGCTCTTCTTAAGGATAAGAGATATTCTATATCCTTCACTAACTCTAATTGTATCATTCAGGACAAGTCACAGTTTCAAAAATGATTGGGAAGATTAAATTAATCAGTGGACTCTACTTGCTCAGAATAAAGGACGATAAGAGTAAAGAGTTTTCTACTCGATCTACTGCATTACTATGTAAAGCATCCACAACCACATGGCATAAACGCATGGGACACCCCTCTATCAATAAAATAAAAGAATTGTCCAAAAGGATAGAGATTTCCGATTCTTTGAATTGTAAAGAAACTTGTCATGTTTGTCTCTTAGCTAAACAGAAACGTCTTTCATTTCCAGCCTTGAATAATGTTGCTGAAAACATATTTGACCTTGTGCATTGTGGCATATGGGGTCCTTTTAAAACTCAAACTCATGTAGGTCATTCTTATTTTGCTACCATAGTTGATGATAAGTTAAGATATACTTGGGTTCATCTTTTGAGAAATAAAAACAATATTCTACAA ATGATTGGGAAGATTAAATTAATCAGTGGACTCTACTTGCTCAGAATAAAGGACGATAAGAGTAAAGAGTTTTCTACTCGATCTACTGCATTACTATGTAAAGCATCCACAACCACATGGCATAAACGCATGGGACACCCCTCTATCAATAAAATAAAAGAATTGTCCAAAAGGATAGAGATTTCCGATTCTTTGAATTGTAAAGAAACTTGTCATGTTTGTCTCTTAGCTAAACAGAAACGTCTTTCATTTCCAGCCTTGAATAATGTTGCTGAAAACATATTTGACCTTGTGCATTGTGGCATATGGGGTCCTTTTAAAACTCAAACTCATGTAGGTCATTCTTATTTTGCTACCATAGTTGATGATAAGTTAAGATATACTTGGGTTCATCTTTTGAGAAATAAAAACAATATTCTACAA MIGKIKLISGLYLLRIKDDKSKEFSTRSTALLCKASTTTWHKRMGHPSINKIKELSKRIEISDSLNCKETCHVCLLAKQKRLSFPALNNVAENIFDLVHCGIWGPFKTQTHVGHSYFATIVDDKLRYTWVHLLRNKNNILQ Homology
BLAST of MELO.jh024932.1 vs. NCBI nr
Match: CAA3023561.1 (retroelement pol poly [Olea europaea subsp. europaea]) HSP 1 Score: 227 bits (579), Expect = 1.09e-68 Identity = 110/228 (48.25%), Postives = 150/228 (65.79%), Query Frame = 0
BLAST of MELO.jh024932.1 vs. NCBI nr
Match: KAG7585478.1 (Integrase catalytic core [Arabidopsis thaliana x Arabidopsis arenosa]) HSP 1 Score: 217 bits (552), Expect = 6.24e-65 Identity = 105/227 (46.26%), Postives = 145/227 (63.88%), Query Frame = 0
BLAST of MELO.jh024932.1 vs. NCBI nr
Match: KAG7587171.1 (Integrase catalytic core [Arabidopsis thaliana x Arabidopsis arenosa]) HSP 1 Score: 229 bits (583), Expect = 7.18e-65 Identity = 115/230 (50.00%), Postives = 151/230 (65.65%), Query Frame = 0
BLAST of MELO.jh024932.1 vs. NCBI nr
Match: KAA0065480.1 (Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa] >TYK08721.1 Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa]) HSP 1 Score: 223 bits (569), Expect = 7.91e-65 Identity = 116/218 (53.21%), Postives = 147/218 (67.43%), Query Frame = 0
BLAST of MELO.jh024932.1 vs. NCBI nr
Match: CAE5963143.1 (unnamed protein product [Arabidopsis arenosa]) HSP 1 Score: 227 bits (579), Expect = 9.94e-65 Identity = 115/232 (49.57%), Postives = 157/232 (67.67%), Query Frame = 0
BLAST of MELO.jh024932.1 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 8.8e-29 Identity = 69/196 (35.20%), Postives = 106/196 (54.08%), Query Frame = 0
BLAST of MELO.jh024932.1 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 5.4e-18 Identity = 51/192 (26.56%), Postives = 95/192 (49.48%), Query Frame = 0
BLAST of MELO.jh024932.1 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3) HSP 1 Score: 90.5 bits (223), Expect = 2.7e-17 Identity = 60/201 (29.85%), Postives = 94/201 (46.77%), Query Frame = 0
BLAST of MELO.jh024932.1 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 8.6e-16 Identity = 46/191 (24.08%), Postives = 93/191 (48.69%), Query Frame = 0
BLAST of MELO.jh024932.1 vs. ExPASy TrEMBL
Match: A0A1J3HJY9 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) OS=Noccaea caerulescens OX=107243 GN=LE_TR2272_c1_g1_i1_g.6347 PE=4 SV=1) HSP 1 Score: 214 bits (544), Expect = 1.02e-65 Identity = 110/227 (48.46%), Postives = 145/227 (63.88%), Query Frame = 0
BLAST of MELO.jh024932.1 vs. ExPASy TrEMBL
Match: A0A5A7VE66 (Cysteine-rich RLK (Receptor-like protein kinase) 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold76G00250 PE=4 SV=1) HSP 1 Score: 223 bits (569), Expect = 3.83e-65 Identity = 116/218 (53.21%), Postives = 147/218 (67.43%), Query Frame = 0
BLAST of MELO.jh024932.1 vs. ExPASy TrEMBL
Match: A0A5D3D1N3 (Cysteine-rich RLK (Receptor-like protein kinase) 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00250 PE=4 SV=1) HSP 1 Score: 217 bits (552), Expect = 5.21e-62 Identity = 109/227 (48.02%), Postives = 147/227 (64.76%), Query Frame = 0
BLAST of MELO.jh024932.1 vs. ExPASy TrEMBL
Match: A0A5A7VQN7 (Cysteine-rich RLK (Receptor-like protein kinase) 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G002210 PE=4 SV=1) HSP 1 Score: 217 bits (552), Expect = 2.50e-61 Identity = 109/227 (48.02%), Postives = 147/227 (64.76%), Query Frame = 0
BLAST of MELO.jh024932.1 vs. ExPASy TrEMBL
Match: A0A1J3G7B5 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Noccaea caerulescens OX=107243 GN=LC_TR6227_c2_g1_i1_g.20992 PE=4 SV=1) HSP 1 Score: 208 bits (529), Expect = 2.30e-60 Identity = 103/227 (45.37%), Postives = 145/227 (63.88%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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