Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ACGATTAGTCCTCTCATATGTTTCTACATTGGTGAGTGGCATCATCCTGATAGAGTACTTAGACAGTTCGGTATTCAACAAGCTGTTCCACGTGACTGTAATACTGAACCACTGTTGCACAACATTGACCTGAGGACTGCTGATTGGTCAGATAGAGTTGCTCATTTAGTGATGCGATGACATAATCGCAGAAGGTTTACTGCTACGGGACCTCCAATTGAGCAGTTTGATATGGATGTAACTCAAGAATACATCCATTGGTACAAAAACATTAGCAAGCTCTATATCACCCAACCGGGAGCTGCTATGAGTCATCTGGTATACATTTAA
mRNA sequence
ACGATTAGTCCTCTCATATGTTTCTACATTGGTGAGTGGCATCATCCTGATAGAGTACTTAGACAGTTCGGTATTCAACAAGCTGTTCCACGTGACTGTAATACTGAACCACTGTTGCACAACATTGACCTGAGGACTGCTGATTGGTCAGATAGAGTTGCTCATTTAGTGATGCGATGACATAATCGCAGAAGGTTTACTGCTACGGGACCTCCAATTGAGCAGTTTGATATGGATGTAACTCAAGAATACATCCATTGGTACAAAAACATTAGCAAGCTCTATATCACCCAACCGGGAGCTGCTATGAGTCATCTGGTATACATTTAA
Coding sequence (CDS)
ATGGATGTAACTCAAGAATACATCCATTGGTACAAAAACATTAGCAAGCTCTATATCACCCAACCGGGAGCTGCTATGAGTCATCTGGTATACATTTAA
Protein sequence
MDVTQEYIHWYKNISKLYITQPGAAMSHLVYI
Homology
BLAST of MELO.jh024751.1 vs. NCBI nr
Match:
XP_016900498.1 (PREDICTED: GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo])
HSP 1 Score: 65.5 bits (158), Expect = 2.38e-11
Identity = 29/29 (100.00%), Postives = 29/29 (100.00%), Query Frame = 0
Query: 1 MDVTQEYIHWYKNISKLYITQPGAAMSHL 29
MDVTQEYIHWYKNISKLYITQPGAAMSHL
Sbjct: 1 MDVTQEYIHWYKNISKLYITQPGAAMSHL 29
BLAST of MELO.jh024751.1 vs. NCBI nr
Match:
XP_008449513.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo])
HSP 1 Score: 65.5 bits (158), Expect = 2.88e-11
Identity = 29/29 (100.00%), Postives = 29/29 (100.00%), Query Frame = 0
Query: 1 MDVTQEYIHWYKNISKLYITQPGAAMSHL 29
MDVTQEYIHWYKNISKLYITQPGAAMSHL
Sbjct: 21 MDVTQEYIHWYKNISKLYITQPGAAMSHL 49
BLAST of MELO.jh024751.1 vs. NCBI nr
Match:
KAA0055863.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa] >TYK24087.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 62.4 bits (150), Expect = 3.41e-11
Identity = 28/29 (96.55%), Postives = 28/29 (96.55%), Query Frame = 0
Query: 1 MDVTQEYIHWYKNISKLYITQPGAAMSHL 29
MDVTQEYIHWYKNISKLYITQP AAMSHL
Sbjct: 64 MDVTQEYIHWYKNISKLYITQPRAAMSHL 92
BLAST of MELO.jh024751.1 vs. NCBI nr
Match:
TYJ95836.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 65.5 bits (158), Expect = 4.96e-11
Identity = 29/29 (100.00%), Postives = 29/29 (100.00%), Query Frame = 0
Query: 1 MDVTQEYIHWYKNISKLYITQPGAAMSHL 29
MDVTQEYIHWYKNISKLYITQPGAAMSHL
Sbjct: 1034 MDVTQEYIHWYKNISKLYITQPGAAMSHL 1062
BLAST of MELO.jh024751.1 vs. NCBI nr
Match:
TYK27427.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])
HSP 1 Score: 65.5 bits (158), Expect = 4.97e-11
Identity = 29/29 (100.00%), Postives = 29/29 (100.00%), Query Frame = 0
Query: 1 MDVTQEYIHWYKNISKLYITQPGAAMSHL 29
MDVTQEYIHWYKNISKLYITQPGAAMSHL
Sbjct: 764 MDVTQEYIHWYKNISKLYITQPGAAMSHL 792
BLAST of MELO.jh024751.1 vs. ExPASy TrEMBL
Match:
A0A1S4DWZ9 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491376 PE=4 SV=1)
HSP 1 Score: 65.5 bits (158), Expect = 1.15e-11
Identity = 29/29 (100.00%), Postives = 29/29 (100.00%), Query Frame = 0
Query: 1 MDVTQEYIHWYKNISKLYITQPGAAMSHL 29
MDVTQEYIHWYKNISKLYITQPGAAMSHL
Sbjct: 1 MDVTQEYIHWYKNISKLYITQPGAAMSHL 29
BLAST of MELO.jh024751.1 vs. ExPASy TrEMBL
Match:
A0A1S3BLK4 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491376 PE=4 SV=1)
HSP 1 Score: 65.5 bits (158), Expect = 1.40e-11
Identity = 29/29 (100.00%), Postives = 29/29 (100.00%), Query Frame = 0
Query: 1 MDVTQEYIHWYKNISKLYITQPGAAMSHL 29
MDVTQEYIHWYKNISKLYITQPGAAMSHL
Sbjct: 21 MDVTQEYIHWYKNISKLYITQPGAAMSHL 49
BLAST of MELO.jh024751.1 vs. ExPASy TrEMBL
Match:
A0A5D3DKG5 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold943G00590 PE=4 SV=1)
HSP 1 Score: 62.4 bits (150), Expect = 1.65e-11
Identity = 28/29 (96.55%), Postives = 28/29 (96.55%), Query Frame = 0
Query: 1 MDVTQEYIHWYKNISKLYITQPGAAMSHL 29
MDVTQEYIHWYKNISKLYITQP AAMSHL
Sbjct: 64 MDVTQEYIHWYKNISKLYITQPRAAMSHL 92
BLAST of MELO.jh024751.1 vs. ExPASy TrEMBL
Match:
A0A5D3BAB0 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001240 PE=4 SV=1)
HSP 1 Score: 65.5 bits (158), Expect = 2.40e-11
Identity = 29/29 (100.00%), Postives = 29/29 (100.00%), Query Frame = 0
Query: 1 MDVTQEYIHWYKNISKLYITQPGAAMSHL 29
MDVTQEYIHWYKNISKLYITQPGAAMSHL
Sbjct: 1034 MDVTQEYIHWYKNISKLYITQPGAAMSHL 1062
BLAST of MELO.jh024751.1 vs. ExPASy TrEMBL
Match:
A0A5D3DUI1 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold325G001210 PE=4 SV=1)
HSP 1 Score: 65.5 bits (158), Expect = 2.41e-11
Identity = 29/29 (100.00%), Postives = 29/29 (100.00%), Query Frame = 0
Query: 1 MDVTQEYIHWYKNISKLYITQPGAAMSHL 29
MDVTQEYIHWYKNISKLYITQPGAAMSHL
Sbjct: 764 MDVTQEYIHWYKNISKLYITQPGAAMSHL 792
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_016900498.1 | 2.38e-11 | 100.00 | PREDICTED: GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumi... | [more] |
| XP_008449513.1 | 2.88e-11 | 100.00 | PREDICTED: mediator of RNA polymerase II transcription subunit 12-like isoform X... | [more] |
| KAA0055863.1 | 3.41e-11 | 96.55 | serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var.... | [more] |
| TYJ95836.1 | 4.96e-11 | 100.00 | serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var.... | [more] |
| TYK27427.1 | 4.97e-11 | 100.00 | mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A1S4DWZ9 | 1.15e-11 | 100.00 | GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo OX... | [more] |
| A0A1S3BLK4 | 1.40e-11 | 100.00 | mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi... | [more] |
| A0A5D3DKG5 | 1.65e-11 | 96.55 | Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va... | [more] |
| A0A5D3BAB0 | 2.40e-11 | 100.00 | Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va... | [more] |
| A0A5D3DUI1 | 2.41e-11 | 100.00 | Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
