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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonstart_codonCDSpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below. GAAAGAAAAAGAAAAGAAGAAAAAGGATGAGGATGAGAAGAAAAAGAAAGAAGAGGCAAGAAAGGATGACGAGGTGATAAGAGAGACACAAGACACCACATTAAACATTTTCTCACCTATCGCAAAAATCGAGTTTGAGAGTTTGGCGAAAAAGACCCAAGAGAAGACTAAGAAGGTGAAGTCTAGGCTCTTAAAACTAAAAGTAAAAGCACAACGCGTTAAGGCCTTAGTGGAAGAAAAGGAAGAAGCAAAGAAAAAGGGGCGAGAAGAGCTCCTGAGTAAGGTAGAAAAGGTGGTCCATTCCGCAAAAAAGGACAAGGGCAAGGAGAAGACACATGAAGAGCACTGCGAGGAGTTTGAGAAGGAGATAGAAAATCTATGTCCTTTGGAGAAGGAAGCGCCAAGGCCAAAGAAAAAAAGAAAGGTCACAATGAAAAAGAAGACCTTAAAGATGCAATTTGAAAATAGGCAAGCTGAGAAGGTGAAAAAAAATCTCAAAATAACAAAGGGGAAGAGGGAGAGGAAAGTGACTCAGAAGGACCACTCTCCTCTACCGAAGTTAGTTAACAATTCATGA mRNA sequence GAAAGAAAAAGAAAAGAAGAAAAAGGATGAGGATGAGAAGAAAAAGAAAGAAGAGGCAAGAAAGGATGACGAGACCCAAGAGAAGACTAAGAAGGTGAAGTCTAGGCTCTTAAAACTAAAAGTAAAAGCACAACGCGTTAAGGCCTTAGTGGAAGAAAAGGAAGAAGCAAAGAAAAAGGGGCGAGAAGAGCTCCTGAGTAAGGTAGAAAAGGTGGTCCATTCCGCAAAAAAGGACAAGGGCAAGGAGAAGACACATGAAGAGCACTGCGAGGAGTTTGAGAAGGAGATAGAAAATCTATGTCCTTTGGAGAAGGAAGCGCCAAGGCCAAAGAAAAAAAGAAAGGTCACAATGAAAAAGAAGACCTTAAAGATGCAATTTGAAAATAGGCAAGCTGAGAAGGTGAAAAAAAATCTCAAAATAACAAAGGGGAAGAGGGAGAGGAAAGTGACTCAGAAGGACCACTCTCCTCTACCGAAGTTAGTTAACAATTCATGA Coding sequence (CDS) ATGAAAAAGAAGACCTTAAAGATGCAATTTGAAAATAGGCAAGCTGAGAAGGTGAAAAAAAATCTCAAAATAACAAAGGGGAAGAGGGAGAGGAAAGTGACTCAGAAGGACCACTCTCCTCTACCGAAGTTAGTTAACAATTCATGA Protein sequence MKKKTLKMQFENRQAEKVKKNLKITKGKRERKVTQKDHSPLPKLVNNS
Homology
BLAST of MELO.jh015565.1 vs. NCBI nr
Match: KAA0048705.1 (protein MNN4-like [Cucumis melo var. makuwa]) HSP 1 Score: 88.2 bits (217), Expect = 5.87e-20 Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 0
Query: 1 MKKKTLKMQFENRQAEKVKKNLKITKGKRERKVTQKDHSPLPKLVNNS 48
MKKKTLKMQFENRQAEKVKKNLKITKGKRERKVTQKDHSPLPKLVNNS
Sbjct: 164 MKKKTLKMQFENRQAEKVKKNLKITKGKRERKVTQKDHSPLPKLVNNS 211
BLAST of MELO.jh015565.1 vs. NCBI nr
Match: TYK15833.1 (protein MNN4-like [Cucumis melo var. makuwa]) HSP 1 Score: 79.0 bits (193), Expect = 1.07e-16 Identity = 43/43 (100.00%), Postives = 43/43 (100.00%), Query Frame = 0
Query: 1 MKKKTLKMQFENRQAEKVKKNLKITKGKRERKVTQKDHSPLPK 43
MKKKTLKMQFENRQAEKVKKNLKITKGKRERKVTQKDHSPLPK
Sbjct: 100 MKKKTLKMQFENRQAEKVKKNLKITKGKRERKVTQKDHSPLPK 142
BLAST of MELO.jh015565.1 vs. ExPASy TrEMBL
Match: A0A5A7U502 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G00280 PE=4 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 2.84e-20 Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 0
Query: 1 MKKKTLKMQFENRQAEKVKKNLKITKGKRERKVTQKDHSPLPKLVNNS 48
MKKKTLKMQFENRQAEKVKKNLKITKGKRERKVTQKDHSPLPKLVNNS
Sbjct: 164 MKKKTLKMQFENRQAEKVKKNLKITKGKRERKVTQKDHSPLPKLVNNS 211
BLAST of MELO.jh015565.1 vs. ExPASy TrEMBL
Match: A0A5D3CVF0 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold637G00030 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 5.18e-17 Identity = 43/43 (100.00%), Postives = 43/43 (100.00%), Query Frame = 0
Query: 1 MKKKTLKMQFENRQAEKVKKNLKITKGKRERKVTQKDHSPLPK 43
MKKKTLKMQFENRQAEKVKKNLKITKGKRERKVTQKDHSPLPK
Sbjct: 100 MKKKTLKMQFENRQAEKVKKNLKITKGKRERKVTQKDHSPLPK 142
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAA0048705.1 | 5.87e-20 | 100.00 | protein MNN4-like [Cucumis melo var. makuwa] | [more] |
| TYK15833.1 | 1.07e-16 | 100.00 | protein MNN4-like [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7U502 | 2.84e-20 | 100.00 | Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G0... | [more] |
| A0A5D3CVF0 | 5.18e-17 | 100.00 | Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold637G00... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 1..21 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 20..38 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 20..48 |
Relationships
The following mRNA feature(s) are a part of this gene:
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