Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
TATTTGAAGGATTCTCTTCTACCAGAGTCCAGAGAGATTGTAAATGCAATGAAATCAACCATTCCAAAACTGAACTGAGAGTTAAATATGTCGTCATTTTCAAACCAAAATGTAATATAGTGTTATAAACAATAAATGTGAATGTCATCTTTCAACAGTATGGTTATGTGTTGTTATCTTCCAAGGTCAAAAAATCAGGCTCAGCTGGCTTCTGAAGCAATATGGCTATCGTAGCTCTTCTAGTACTATTTCGTCTCACCGTGCGAAGCATGTTAGCAGCAAATCTGGCTGCGTAGATGGTGGTGCCTAAACTCAGTGACTGGCCCTCAAGGGAAGCTAATGCGTTTTTCAACCTACTCTCTTCCTCCTTGAGAGACTCTTTGAGCTTCTTTCTTTGATGGCGTCGCCACCGCCACGTTGCTTGTATGAAACAAGCTGCCCAGGTTCTCCACTGCTGTGAGTAAAATCTGAAAACTTGGCGTAGCTGCTTGCTGTGAAGTTTGCGGTATTGAGATGCAACAAATTTCAAGTCGTTGGATTCAAAAGAAAATGCTTCAACTTCTGTAAGAGATCGGACAGTTCGAGTTGAAATAGGGAGATTGGTTGAGGAATGAGGGTCTAGAGCCCATGTCAGTAGTTCTTCTCCACAGAAATCACCAGCCATGAGGAAATCGGAGTTGAAGAATATAGTTCTCCCACCATTTGTAGTCATGGTCAAGAGCTTGCCTCTCATGATGAAGAGCATTTCATCAACTGGATCGCCTTCCCGAACAATACAACTTTCTTCTGTGTACAGCACTGGCTTGAGATGGACACACATTGCATCCAACAATCGTTCATCCATCTTTTCAAACATCGGGACCTTAATGGAAAGTGTAAACAAATCATGAGAATCAATTCAGCAAGTCAAGCTTGCAGTGTATGTGTAACTGAACTAGTGATTGTTTATGACCATTGTTATCCATC
mRNA sequence
TATTTGAAGGATTCTCTTCTACCAGAGTCCAGAGAGATTGTAAATGCAATGAAATCAACCATTCCAAAACTGAACTGAGAGTTAAATATGTCGTCATTTTCAAACCAAAATGTAATATAGTGTTATAAACAATAAATGTGAATGTCATCTTTCAACAGTATGGTTATGTGTTGTTATCTTCCAAGGTCAAAAAATCAGGCTCAGCTGGCTTCTGAAGCAATATGGCTATCGTAGCTCTTCTAGTACTATTTCGTCTCACCGTGCGAAGCATGTTAGCAGCAAATCTGGCTGCGTAGATGGTGGTGCCTAAACTCAGTGACTGGCCCTCAAGGGAAGCTAATGCGTTTTTCAACCTACTCTCTTCCTCCTTGAGAGACTCTTTGAGCTTCTTTCTTTGATGGCGTCGCCACCGCCACGTTGCTTGTATGAAACAAGCTGCCCAGGTTCTCCACTGCTGTGAGTAAAATCTGAAAACTTGGCGTAGCTGCTTGCTGTGAAGTTTGCGGTATTGAGATGCAACAAATTTCAAGTCGTTGGATTCAAAAGAAAATGCTTCAACTTCTGTAAGAGATCGGACAGTTCGAGTTGAAATAGGGAGATTGGTTGAGGAATGAGGGTCTAGAGCCCATGTCAGTAGTTCTTCTCCACAGAAATCACCAGCCATGAGGAAATCGGAGTTGAAGAATATAGTTCTCCCACCATTTGTAGTCATGGTCAAGAGCTTGCCTCTCATGATGAAGAGCATTTCATCAACTGGATCGCCTTCCCGAACAATACAACTTTCTTCTGTGTACAGCACTGGCTTGAGATGGACACACATTGCATCCAACAATCGTTCATCCATCTTTTCAAACATCGGGACCTTAATGGAAAGTGTAAACAAATCATGAGAATCAATTCAGCAAGTCAAGCTTGCAGTGTATGTGTAACTGAACTAGTGATTGTTTATGACCATTGTTATCCATC
Coding sequence (CDS)
ATGAGGAAATCGGAGTTGAAGAATATAGTTCTCCCACCATTTGTAGTCATGGTCAAGAGCTTGCCTCTCATGATGAAGAGCATTTCATCAACTGGATCGCCTTCCCGAACAATACAACTTTCTTCTGTGTACAGCACTGGCTTGAGATGGACACACATTGCATCCAACAATCGTTCATCCATCTTTTCAAACATCGGGACCTTAATGGAAAGTGTAAACAAATCATGA
Protein sequence
MRKSELKNIVLPPFVVMVKSLPLMMKSISSTGSPSRTIQLSSVYSTGLRWTHIASNNRSSIFSNIGTLMESVNKS
Homology
BLAST of MELO.jh012887.1 vs. NCBI nr
Match:
TVU33294.1 (hypothetical protein EJB05_25104 [Eragrostis curvula])
HSP 1 Score: 64.3 bits (155), Expect = 5.02e-11
Identity = 36/54 (66.67%), Postives = 42/54 (77.78%), Query Frame = 0
Query: 2 RKSELKNIVLPPFVVMVKSLPLMMKSISSTGSPSRTIQLSSVYSTGLRWTHIAS 55
R ELK V PPFVV++ PLMMKSIS TGSPSRT+QL SVY+ GLR +H+AS
Sbjct: 66 RTLELKKPVCPPFVVILSRDPLMMKSISFTGSPSRTMQLPSVYNMGLRRSHMAS 119
BLAST of MELO.jh012887.1 vs. NCBI nr
Match:
CAA2632351.1 (unnamed protein product [Spirodela intermedia])
HSP 1 Score: 63.9 bits (154), Expect = 1.74e-10
Identity = 35/55 (63.64%), Postives = 41/55 (74.55%), Query Frame = 0
Query: 1 MRKSELKNIVLPPFVVMVKSLPLMMKSISSTGSPSRTIQLSSVYSTGLRWTHIAS 55
+RKS LK VLPP VV + S+P MM SISSTGSPSRT++L VY TG +HIAS
Sbjct: 67 LRKSALKKPVLPPLVVALSSVPRMMNSISSTGSPSRTMRLDPVYRTGFSLSHIAS 121
BLAST of MELO.jh012887.1 vs. NCBI nr
Match:
CAA7408668.1 (unnamed protein product [Spirodela intermedia])
HSP 1 Score: 63.5 bits (153), Expect = 2.45e-10
Identity = 35/55 (63.64%), Postives = 40/55 (72.73%), Query Frame = 0
Query: 1 MRKSELKNIVLPPFVVMVKSLPLMMKSISSTGSPSRTIQLSSVYSTGLRWTHIAS 55
+RKS LK VLPP VV + S+P MM SISSTGSPSRT+ L VY TG +HIAS
Sbjct: 67 LRKSALKKPVLPPLVVALSSVPRMMNSISSTGSPSRTMMLDPVYRTGFSLSHIAS 121
BLAST of MELO.jh012887.1 vs. NCBI nr
Match:
KAB8086696.1 (hypothetical protein EE612_010168 [Oryza sativa] >BAS77938.1 Os02g0255033 [Oryza sativa Japonica Group])
HSP 1 Score: 55.5 bits (132), Expect = 6.01e-08
Identity = 31/44 (70.45%), Postives = 36/44 (81.82%), Query Frame = 0
Query: 24 MMKSISSTGSPSRTIQLSSVYSTGLRWTHIASNNRSSIFSNIGT 67
MMKSIS TGSPSR +QL SVYS G R +H+AS + SS+FSNIGT
Sbjct: 1 MMKSISFTGSPSRMMQLPSVYSMGFRRSHMASKSFSSMFSNIGT 44
BLAST of MELO.jh012887.1 vs. NCBI nr
Match:
RDX82130.1 (hypothetical protein CR513_37119, partial [Mucuna pruriens])
HSP 1 Score: 56.2 bits (134), Expect = 1.05e-07
Identity = 30/38 (78.95%), Postives = 33/38 (86.84%), Query Frame = 0
Query: 1 MRKSELKNIVLPPFVVMVKSLPLMMKSISSTGSPSRTI 38
+R SELK VLPPFVVMV SLP +MKSISSTGSPSRT+
Sbjct: 103 LRYSELKKPVLPPFVVMVNSLPRIMKSISSTGSPSRTM 140
BLAST of MELO.jh012887.1 vs. ExPASy TrEMBL
Match:
A0A3Q7H2P7 (Uncharacterized protein OS=Solanum lycopersicum OX=4081 PE=4 SV=1)
HSP 1 Score: 64.7 bits (156), Expect = 1.53e-11
Identity = 39/65 (60.00%), Postives = 46/65 (70.77%), Query Frame = 0
Query: 3 KSELKNIVLPPFVVMVKSLPLMMKSISSTGSPSRTIQLSSVYSTGLRWTHIASNNRSSIF 62
K LK +LPP VV + P MMKSISSTGSPSRT+ + S+Y G R + IAS+N SSIF
Sbjct: 52 KLRLKKPLLPPSVVTLSRRPRMMKSISSTGSPSRTMCVFSIYKHGFRRSQIASSNLSSIF 111
Query: 63 SNIGT 67
SN GT
Sbjct: 112 SNRGT 116
BLAST of MELO.jh012887.1 vs. ExPASy TrEMBL
Match:
A0A5J9VCX9 (Uncharacterized protein OS=Eragrostis curvula OX=38414 GN=EJB05_25104 PE=4 SV=1)
HSP 1 Score: 64.3 bits (155), Expect = 2.43e-11
Identity = 36/54 (66.67%), Postives = 42/54 (77.78%), Query Frame = 0
Query: 2 RKSELKNIVLPPFVVMVKSLPLMMKSISSTGSPSRTIQLSSVYSTGLRWTHIAS 55
R ELK V PPFVV++ PLMMKSIS TGSPSRT+QL SVY+ GLR +H+AS
Sbjct: 66 RTLELKKPVCPPFVVILSRDPLMMKSISFTGSPSRTMQLPSVYNMGLRRSHMAS 119
BLAST of MELO.jh012887.1 vs. ExPASy TrEMBL
Match:
A0A7I8JP70 (Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI7747_15017973 PE=4 SV=1)
HSP 1 Score: 63.9 bits (154), Expect = 8.42e-11
Identity = 35/55 (63.64%), Postives = 41/55 (74.55%), Query Frame = 0
Query: 1 MRKSELKNIVLPPFVVMVKSLPLMMKSISSTGSPSRTIQLSSVYSTGLRWTHIAS 55
+RKS LK VLPP VV + S+P MM SISSTGSPSRT++L VY TG +HIAS
Sbjct: 67 LRKSALKKPVLPPLVVALSSVPRMMNSISSTGSPSRTMRLDPVYRTGFSLSHIAS 121
BLAST of MELO.jh012887.1 vs. ExPASy TrEMBL
Match:
A0A7I8LH77 (Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI8410_15019346 PE=4 SV=1)
HSP 1 Score: 63.5 bits (153), Expect = 1.19e-10
Identity = 35/55 (63.64%), Postives = 40/55 (72.73%), Query Frame = 0
Query: 1 MRKSELKNIVLPPFVVMVKSLPLMMKSISSTGSPSRTIQLSSVYSTGLRWTHIAS 55
+RKS LK VLPP VV + S+P MM SISSTGSPSRT+ L VY TG +HIAS
Sbjct: 67 LRKSALKKPVLPPLVVALSSVPRMMNSISSTGSPSRTMMLDPVYRTGFSLSHIAS 121
BLAST of MELO.jh012887.1 vs. ExPASy TrEMBL
Match:
A0A0P0VH60 (Os02g0255033 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0255033 PE=4 SV=1)
HSP 1 Score: 55.5 bits (132), Expect = 2.91e-08
Identity = 31/44 (70.45%), Postives = 36/44 (81.82%), Query Frame = 0
Query: 24 MMKSISSTGSPSRTIQLSSVYSTGLRWTHIASNNRSSIFSNIGT 67
MMKSIS TGSPSR +QL SVYS G R +H+AS + SS+FSNIGT
Sbjct: 1 MMKSISFTGSPSRMMQLPSVYSMGFRRSHMASKSFSSMFSNIGT 44
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
TVU33294.1 | 5.02e-11 | 66.67 | hypothetical protein EJB05_25104 [Eragrostis curvula] | [more] |
CAA2632351.1 | 1.74e-10 | 63.64 | unnamed protein product [Spirodela intermedia] | [more] |
CAA7408668.1 | 2.45e-10 | 63.64 | unnamed protein product [Spirodela intermedia] | [more] |
KAB8086696.1 | 6.01e-08 | 70.45 | hypothetical protein EE612_010168 [Oryza sativa] >BAS77938.1 Os02g0255033 [Oryza... | [more] |
RDX82130.1 | 1.05e-07 | 78.95 | hypothetical protein CR513_37119, partial [Mucuna pruriens] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A3Q7H2P7 | 1.53e-11 | 60.00 | Uncharacterized protein OS=Solanum lycopersicum OX=4081 PE=4 SV=1 | [more] |
A0A5J9VCX9 | 2.43e-11 | 66.67 | Uncharacterized protein OS=Eragrostis curvula OX=38414 GN=EJB05_25104 PE=4 SV=1 | [more] |
A0A7I8JP70 | 8.42e-11 | 63.64 | Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI7747_15017973 PE=4 SV... | [more] |
A0A7I8LH77 | 1.19e-10 | 63.64 | Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI8410_15019346 PE=4 SV... | [more] |
A0A0P0VH60 | 2.91e-08 | 70.45 | Os02g0255033 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0255033 PE... | [more] |
Match Name | E-value | Identity | Description | |