Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATTGTGTTTTGGCAACAGAGAACGAAAAGTTAAGAGAAGAAGTCAAGAAATGGGTCCAGCAAGCTGTTAATACTCCAAGAGATTTAGACGAGGTGAAACGAAAGCGATTGGAGTTGGAAAAGGAAAACGATTCTTTAAACACTAAGGCAATCTAAGTGAGAAAAAAGAATAAGAGGTTATTAAGGAATATTGCTAACCTACATGAAGAGATAGAAGCTAAAAAGGTATGCATTACAGATTTGAAACATGAAATAGAAAAATTGAATGGAATTGCCTTAGAGTTCCAAAATGCATTACATGAA
mRNA sequence
ATGAATTGTGTTTTGGCAACAGAGAACGAAAAGTTAAGAGAAGAAGTCAAGAAATGGGTCCAGCAAGCTGTTAATACTCCAAGAGATTTAGACGAGGTGAAACGAAAGCGATTGGAGTTGGAAAAGGAAAACGATTCTTTAAACACTAAGGCAATCTAAGTGAGAAAAAAGAATAAGAGGTTATTAAGGAATATTGCTAACCTACATGAAGAGATAGAAGCTAAAAAGGTATGCATTACAGATTTGAAACATGAAATAGAAAAATTGAATGGAATTGCCTTAGAGTTCCAAAATGCATTACATGAA
Coding sequence (CDS)
ATGAATTGTGTTTTGGCAACAGAGAACGAAAAGTTAAGAGAAGAAGTCAAGAAATGGGTCCAGCAAGCTGTTAATACTCCAAGAGATTTAGACGAGGTGAAACGAAAGCGATTGGAGTTGGAAAAGGAAAACGATTCTTTAAACACTAAGGCAATCTAA
Protein sequence
MNCVLATENEKLREEVKKWVQQAVNTPRDLDEVKRKRLELEKENDSLNTKAI
Homology
BLAST of MELO.jh010446.1 vs. NCBI nr
Match:
TYK09458.1 (glial fibrillary acidic protein-like [Cucumis melo var. makuwa])
HSP 1 Score: 92.4 bits (228), Expect = 1.76e-22
Identity = 48/52 (92.31%), Postives = 50/52 (96.15%), Query Frame = 0
Query: 1 MNCVLATENEKLREEVKKWVQQAVNTPRDLDEVKRKRLELEKENDSLNTKAI 52
MNCVLATENEKL EEVKKWVQQAVNTPRDLDE K+KRLELEKENDSLNT+AI
Sbjct: 1 MNCVLATENEKLGEEVKKWVQQAVNTPRDLDEAKQKRLELEKENDSLNTEAI 52
BLAST of MELO.jh010446.1 vs. NCBI nr
Match:
XP_008464352.1 (PREDICTED: glial fibrillary acidic protein-like, partial [Cucumis melo])
HSP 1 Score: 93.6 bits (231), Expect = 8.75e-22
Identity = 49/52 (94.23%), Postives = 50/52 (96.15%), Query Frame = 0
Query: 1 MNCVLATENEKLREEVKKWVQQAVNTPRDLDEVKRKRLELEKENDSLNTKAI 52
MNCVLATENEKLREEVKKWVQQAVNT RDLDE KRKRLELEKENDSLNT+AI
Sbjct: 27 MNCVLATENEKLREEVKKWVQQAVNTQRDLDEAKRKRLELEKENDSLNTEAI 78
BLAST of MELO.jh010446.1 vs. NCBI nr
Match:
KAA0065294.1 (glial fibrillary acidic protein-like [Cucumis melo var. makuwa])
HSP 1 Score: 93.6 bits (231), Expect = 1.34e-21
Identity = 49/52 (94.23%), Postives = 50/52 (96.15%), Query Frame = 0
Query: 1 MNCVLATENEKLREEVKKWVQQAVNTPRDLDEVKRKRLELEKENDSLNTKAI 52
MNCVLATENEKLREEVKKWVQQAVNT RDLDE KRKRLELEKENDSLNT+AI
Sbjct: 1 MNCVLATENEKLREEVKKWVQQAVNTQRDLDEAKRKRLELEKENDSLNTEAI 52
BLAST of MELO.jh010446.1 vs. NCBI nr
Match:
TYK02650.1 (glial fibrillary acidic protein-like [Cucumis melo var. makuwa])
HSP 1 Score: 88.6 bits (218), Expect = 9.59e-21
Identity = 47/52 (90.38%), Postives = 49/52 (94.23%), Query Frame = 0
Query: 1 MNCVLATENEKLREEVKKWVQQAVNTPRDLDEVKRKRLELEKENDSLNTKAI 52
MNCVLATENEKLREEVKKWVQQAV T RDLDE KRK+LELEKENDSLNT+AI
Sbjct: 1 MNCVLATENEKLREEVKKWVQQAVITQRDLDEAKRKQLELEKENDSLNTEAI 52
BLAST of MELO.jh010446.1 vs. NCBI nr
Match:
KAA0025321.1 (glial fibrillary acidic protein-like [Cucumis melo var. makuwa])
HSP 1 Score: 91.3 bits (225), Expect = 1.04e-20
Identity = 48/52 (92.31%), Postives = 49/52 (94.23%), Query Frame = 0
Query: 1 MNCVLATENEKLREEVKKWVQQAVNTPRDLDEVKRKRLELEKENDSLNTKAI 52
MNCVLATENEKLREEVKKWVQQAVN RDLDE KRKRLELEKENDSLNT+AI
Sbjct: 1 MNCVLATENEKLREEVKKWVQQAVNIQRDLDEAKRKRLELEKENDSLNTEAI 52
BLAST of MELO.jh010446.1 vs. ExPASy TrEMBL
Match:
A0A5D3CE19 (Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold499G00510 PE=4 SV=1)
HSP 1 Score: 92.4 bits (228), Expect = 8.51e-23
Identity = 48/52 (92.31%), Postives = 50/52 (96.15%), Query Frame = 0
Query: 1 MNCVLATENEKLREEVKKWVQQAVNTPRDLDEVKRKRLELEKENDSLNTKAI 52
MNCVLATENEKL EEVKKWVQQAVNTPRDLDE K+KRLELEKENDSLNT+AI
Sbjct: 1 MNCVLATENEKLGEEVKKWVQQAVNTPRDLDEAKQKRLELEKENDSLNTEAI 52
BLAST of MELO.jh010446.1 vs. ExPASy TrEMBL
Match:
A0A1S3CLQ1 (glial fibrillary acidic protein-like OS=Cucumis melo OX=3656 GN=LOC103502260 PE=4 SV=1)
HSP 1 Score: 93.6 bits (231), Expect = 4.24e-22
Identity = 49/52 (94.23%), Postives = 50/52 (96.15%), Query Frame = 0
Query: 1 MNCVLATENEKLREEVKKWVQQAVNTPRDLDEVKRKRLELEKENDSLNTKAI 52
MNCVLATENEKLREEVKKWVQQAVNT RDLDE KRKRLELEKENDSLNT+AI
Sbjct: 27 MNCVLATENEKLREEVKKWVQQAVNTQRDLDEAKRKRLELEKENDSLNTEAI 78
BLAST of MELO.jh010446.1 vs. ExPASy TrEMBL
Match:
A0A5A7VDD9 (Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1023G00070 PE=4 SV=1)
HSP 1 Score: 93.6 bits (231), Expect = 6.48e-22
Identity = 49/52 (94.23%), Postives = 50/52 (96.15%), Query Frame = 0
Query: 1 MNCVLATENEKLREEVKKWVQQAVNTPRDLDEVKRKRLELEKENDSLNTKAI 52
MNCVLATENEKLREEVKKWVQQAVNT RDLDE KRKRLELEKENDSLNT+AI
Sbjct: 1 MNCVLATENEKLREEVKKWVQQAVNTQRDLDEAKRKRLELEKENDSLNTEAI 52
BLAST of MELO.jh010446.1 vs. ExPASy TrEMBL
Match:
A0A5D3BU47 (Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold280G00620 PE=4 SV=1)
HSP 1 Score: 88.6 bits (218), Expect = 4.64e-21
Identity = 47/52 (90.38%), Postives = 49/52 (94.23%), Query Frame = 0
Query: 1 MNCVLATENEKLREEVKKWVQQAVNTPRDLDEVKRKRLELEKENDSLNTKAI 52
MNCVLATENEKLREEVKKWVQQAV T RDLDE KRK+LELEKENDSLNT+AI
Sbjct: 1 MNCVLATENEKLREEVKKWVQQAVITQRDLDEAKRKQLELEKENDSLNTEAI 52
BLAST of MELO.jh010446.1 vs. ExPASy TrEMBL
Match:
A0A5A7SM49 (Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold23528G00010 PE=4 SV=1)
HSP 1 Score: 91.3 bits (225), Expect = 5.01e-21
Identity = 48/52 (92.31%), Postives = 49/52 (94.23%), Query Frame = 0
Query: 1 MNCVLATENEKLREEVKKWVQQAVNTPRDLDEVKRKRLELEKENDSLNTKAI 52
MNCVLATENEKLREEVKKWVQQAVN RDLDE KRKRLELEKENDSLNT+AI
Sbjct: 1 MNCVLATENEKLREEVKKWVQQAVNIQRDLDEAKRKRLELEKENDSLNTEAI 52
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
TYK09458.1 | 1.76e-22 | 92.31 | glial fibrillary acidic protein-like [Cucumis melo var. makuwa] | [more] |
XP_008464352.1 | 8.75e-22 | 94.23 | PREDICTED: glial fibrillary acidic protein-like, partial [Cucumis melo] | [more] |
KAA0065294.1 | 1.34e-21 | 94.23 | glial fibrillary acidic protein-like [Cucumis melo var. makuwa] | [more] |
TYK02650.1 | 9.59e-21 | 90.38 | glial fibrillary acidic protein-like [Cucumis melo var. makuwa] | [more] |
KAA0025321.1 | 1.04e-20 | 92.31 | glial fibrillary acidic protein-like [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3CE19 | 8.51e-23 | 92.31 | Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E... | [more] |
A0A1S3CLQ1 | 4.24e-22 | 94.23 | glial fibrillary acidic protein-like OS=Cucumis melo OX=3656 GN=LOC103502260 PE=... | [more] |
A0A5A7VDD9 | 6.48e-22 | 94.23 | Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E... | [more] |
A0A5D3BU47 | 4.64e-21 | 90.38 | Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E... | [more] |
A0A5A7SM49 | 5.01e-21 | 92.31 | Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E... | [more] |
Match Name | E-value | Identity | Description | |