Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGCGCCGCCATTGGCTACTTCAAATCGACGCCGGAGCTGCTGTCTGCTCGAGCCGCCGACGAGGGAAAACGCACCACTGGCTACGCTCGCCGCCTGGAGACGCGTTGTTGACGGCGGTGCTGCACGGGTTGCACGGGTCGCCGGCGGTGAGGGATGGCTGGGGGGTTCCGTGAGTCTGCTGCTACTGAAACACGGCACGAAAACGCGTGGGCGTCGGATCCCGCCATGAAGGAGACTTGGGGAGTGGAGTAGGAAAAACCGAACCACTATAAAAATTCTCGGTGTCACTCAATCTCTTCTCTCCTCTTTTTAAATTCAGTAATTATCTTCTTTGAATTATTTTGTTATACTGCATATATGTTTGCTTAAATATTTTGTTCAATAATTCTTTTTCTTGATTAATCTTCTTTTCATTGTATAATTGTTTGTTATTCTTGAATCTATTTTTAATTTTAAAAAGTGGTAGGCAACCCTATTCACCCCCCTCTAGCGTTCCCGATCTTACAACAAATATATTTAATATATCATAAATTAGAGGTAGATATAATATGTATTTTAGATGTATAATACATCCATCTGATTTATATCAGGGGTACCTCGGGTGTACATCAGATGTAGATCGGAAGTACATTATAGATACATCAGGTGTACATCAGATATACATCGGGCGTATATCAGATATACATCGATCGTATATATCAAGTATACGTCGGACGTATATCATATATACATCGTGCATATATCAGATATATATCAAGCGTATATCAGGTATACATCAGGCGTATATCATATACACATCGTGCATATATTAGATATATATTGAGCGTATATCAGGTATACATCAGGCGTATATCATATACACATCAGGCGTATATCAGATATACATCGGGCGTATATCAGATATACGTCGGATATATATCAGATATTATAAGGATAAAATTGAAATAATAAAAATTCAAATATTTTGCCATTTGTAAAATATAAAAGAGGTAGACATTTTTGTAAATATATATAAAAATTTAACTACCCAATATAATTTCCTAAAATAAATTTAATATTTAATTAATTTCTAAAATTTAAATAACGTTAGTATTGCACCAAGTTTAGTTTAGTATTGCACCAAGTTTAGCTCAGCATTAAATTGCACATATTTTTTTTACTAAAAAGTCGTGAATTCAAATCCACTGACAACCCACTTGTTGTACTAAAAAAAATAAATGAATAATCACTACCTCGTTAAGAAATGAGAAATTGCATTAGGCAGTAAAATTTTTTTATCTATTAGGAAAATGTCAACGACTTTTAAAATTGCAAATATGGCAAAATAATGAGAATTATTATTTTCAAGTTCCAATTTTACCCTTTTATGTTATTTTACCCCCCCCCCCCCAATCCATTGAGGCATACAGAAAATGGCGGTCGCTTCTAGAGTTAGCGTATACAGCTTCACTCCAACATTCAAAGCCGACGTCAACTACCATAGACCCACCGAACTCACAGCTTTCGACGATACTAAAGCTGGTGTTAAAGGACTAGTTGGGATTATGAAGCCAAACCAAGGAGAAAACCTTTTTCCTATAAGGAAAAGACCCATTTAA
mRNA sequence
ATGATGCGCCGCCATTGGCTACTTCAAATCGACGCCGGAGCTGCTGTCTGCTCGAGCCGCCGACGAGGGAAAACGCACCACTGGCTACGCTCGCCGCCTGGAGACGCGTTGTTGACGGCGGTGCTGCACGGGTTGCACGGGTCGCCGGCGGTGAGGGATGGCTGGGGGGTTCCCTTCACTCCAACATTCAAAGCCGACGTCAACTACCATAGACCCACCGAACTCACAGCTTTCGACGATACTAAAGCTGGTGTTAAAGGACTAGTTGGGATTATGAAGCCAAACCAAGGAGAAAACCTTTTTCCTATAAGGAAAAGACCCATTTAA
Coding sequence (CDS)
ATGATGCGCCGCCATTGGCTACTTCAAATCGACGCCGGAGCTGCTGTCTGCTCGAGCCGCCGACGAGGGAAAACGCACCACTGGCTACGCTCGCCGCCTGGAGACGCGTTGTTGACGGCGGTGCTGCACGGGTTGCACGGGTCGCCGGCGGTGAGGGATGGCTGGGGGGTTCCCTTCACTCCAACATTCAAAGCCGACGTCAACTACCATAGACCCACCGAACTCACAGCTTTCGACGATACTAAAGCTGGTGTTAAAGGACTAGTTGGGATTATGAAGCCAAACCAAGGAGAAAACCTTTTTCCTATAAGGAAAAGACCCATTTAA
Protein sequence
MMRRHWLLQIDAGAAVCSSRRRGKTHHWLRSPPGDALLTAVLHGLHGSPAVRDGWGVPFTPTFKADVNYHRPTELTAFDDTKAGVKGLVGIMKPNQGENLFPIRKRPI
Homology
BLAST of MC11g_new0324 vs. NCBI nr
Match:
XP_004134077.1 (1-aminocyclopropane-1-carboxylate oxidase homolog 1 [Cucumis sativus] >KGN56878.1 hypothetical protein Csa_010587 [Cucumis sativus])
HSP 1 Score: 58.5 bits (140), Expect = 2.83e-07
Identity = 29/40 (72.50%), Postives = 29/40 (72.50%), Query Frame = 0
Query: 50 AVRDGWGVPFTPTFKADVNYHRPTELTAFDDTKAGVKGLV 89
AV G TP KAD NYHRPTEL AFDDTKAGVKGLV
Sbjct: 2 AVSPSDGFILTPLSKADANYHRPTELKAFDDTKAGVKGLV 41
BLAST of MC11g_new0324 vs. NCBI nr
Match:
KAG7018784.1 (1-aminocyclopropane-1-carboxylate oxidase-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 58.5 bits (140), Expect = 2.85e-07
Identity = 27/34 (79.41%), Postives = 28/34 (82.35%), Query Frame = 0
Query: 56 GVPFTPTFKADVNYHRPTELTAFDDTKAGVKGLV 89
G+ TP KAD NYHRPTEL AFDDTKAGVKGLV
Sbjct: 14 GINLTPLSKADENYHRPTELKAFDDTKAGVKGLV 47
BLAST of MC11g_new0324 vs. NCBI nr
Match:
XP_022979197.1 (1-aminocyclopropane-1-carboxylate oxidase homolog 1-like isoform X1 [Cucurbita maxima] >XP_022979198.1 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like isoform X1 [Cucurbita maxima])
HSP 1 Score: 58.5 bits (140), Expect = 2.85e-07
Identity = 27/34 (79.41%), Postives = 28/34 (82.35%), Query Frame = 0
Query: 56 GVPFTPTFKADVNYHRPTELTAFDDTKAGVKGLV 89
G+ TP KAD NYHRPTEL AFDDTKAGVKGLV
Sbjct: 15 GINLTPLSKADENYHRPTELKAFDDTKAGVKGLV 48
BLAST of MC11g_new0324 vs. NCBI nr
Match:
XP_022924231.1 (1-aminocyclopropane-1-carboxylate oxidase homolog 1-like [Cucurbita moschata])
HSP 1 Score: 58.5 bits (140), Expect = 2.85e-07
Identity = 27/34 (79.41%), Postives = 28/34 (82.35%), Query Frame = 0
Query: 56 GVPFTPTFKADVNYHRPTELTAFDDTKAGVKGLV 89
G+ TP KAD NYHRPTEL AFDDTKAGVKGLV
Sbjct: 15 GINLTPLSKADENYHRPTELKAFDDTKAGVKGLV 48
BLAST of MC11g_new0324 vs. NCBI nr
Match:
KAG6582375.1 (1-aminocyclopropane-1-carboxylate oxidase-like 1, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 58.5 bits (140), Expect = 2.97e-07
Identity = 27/34 (79.41%), Postives = 28/34 (82.35%), Query Frame = 0
Query: 56 GVPFTPTFKADVNYHRPTELTAFDDTKAGVKGLV 89
G+ TP KAD NYHRPTEL AFDDTKAGVKGLV
Sbjct: 15 GINLTPLSKADENYHRPTELKAFDDTKAGVKGLV 48
BLAST of MC11g_new0324 vs. ExPASy TrEMBL
Match:
A0A0A0L559 (CmE8 protein OS=Cucumis sativus OX=3659 GN=Csa_3G135750 PE=3 SV=1)
HSP 1 Score: 58.5 bits (140), Expect = 1.37e-07
Identity = 29/40 (72.50%), Postives = 29/40 (72.50%), Query Frame = 0
Query: 50 AVRDGWGVPFTPTFKADVNYHRPTELTAFDDTKAGVKGLV 89
AV G TP KAD NYHRPTEL AFDDTKAGVKGLV
Sbjct: 2 AVSPSDGFILTPLSKADANYHRPTELKAFDDTKAGVKGLV 41
BLAST of MC11g_new0324 vs. ExPASy TrEMBL
Match:
A0A6J1IVF8 (1-aminocyclopropane-1-carboxylate oxidase homolog 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111479007 PE=3 SV=1)
HSP 1 Score: 58.5 bits (140), Expect = 1.38e-07
Identity = 27/34 (79.41%), Postives = 28/34 (82.35%), Query Frame = 0
Query: 56 GVPFTPTFKADVNYHRPTELTAFDDTKAGVKGLV 89
G+ TP KAD NYHRPTEL AFDDTKAGVKGLV
Sbjct: 15 GINLTPLSKADENYHRPTELKAFDDTKAGVKGLV 48
BLAST of MC11g_new0324 vs. ExPASy TrEMBL
Match:
A0A6J1E901 (1-aminocyclopropane-1-carboxylate oxidase homolog 1-like OS=Cucurbita moschata OX=3662 GN=LOC111431757 PE=3 SV=1)
HSP 1 Score: 58.5 bits (140), Expect = 1.38e-07
Identity = 27/34 (79.41%), Postives = 28/34 (82.35%), Query Frame = 0
Query: 56 GVPFTPTFKADVNYHRPTELTAFDDTKAGVKGLV 89
G+ TP KAD NYHRPTEL AFDDTKAGVKGLV
Sbjct: 15 GINLTPLSKADENYHRPTELKAFDDTKAGVKGLV 48
BLAST of MC11g_new0324 vs. ExPASy TrEMBL
Match:
A0A6J1DE52 (1-aminocyclopropane-1-carboxylate oxidase homolog 1-like OS=Momordica charantia OX=3673 GN=LOC111019697 PE=3 SV=1)
HSP 1 Score: 57.8 bits (138), Expect = 2.57e-07
Identity = 26/33 (78.79%), Postives = 27/33 (81.82%), Query Frame = 0
Query: 57 VPFTPTFKADVNYHRPTELTAFDDTKAGVKGLV 89
+ TP KAD NYHRPTEL AFDDTKAGVKGLV
Sbjct: 10 IALTPASKADANYHRPTELKAFDDTKAGVKGLV 42
BLAST of MC11g_new0324 vs. ExPASy TrEMBL
Match:
A0A0A0L4G1 (Fe2OG dioxygenase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G135720 PE=3 SV=1)
HSP 1 Score: 57.4 bits (137), Expect = 3.50e-07
Identity = 29/46 (63.04%), Postives = 33/46 (71.74%), Query Frame = 0
Query: 56 GVPFTPTFKADVNYHRPTELTAFDDTKAGVKGLVGIMKPNQGENLF 101
G+ TP KAD N+HRPTEL AFDDTKAGVKGLV K N+ +F
Sbjct: 7 GINLTPLSKADENFHRPTELKAFDDTKAGVKGLVDA-KVNEIPRIF 51
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| XP_004134077.1 | 2.83e-07 | 72.50 | 1-aminocyclopropane-1-carboxylate oxidase homolog 1 [Cucumis sativus] >KGN56878.... | [more] |
| KAG7018784.1 | 2.85e-07 | 79.41 | 1-aminocyclopropane-1-carboxylate oxidase-like 1, partial [Cucurbita argyrosperm... | [more] |
| XP_022979197.1 | 2.85e-07 | 79.41 | 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like isoform X1 [Cucurbita m... | [more] |
| XP_022924231.1 | 2.85e-07 | 79.41 | 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like [Cucurbita moschata] | [more] |
| KAG6582375.1 | 2.97e-07 | 79.41 | 1-aminocyclopropane-1-carboxylate oxidase-like 1, partial [Cucurbita argyrosperm... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0L559 | 1.37e-07 | 72.50 | CmE8 protein OS=Cucumis sativus OX=3659 GN=Csa_3G135750 PE=3 SV=1 | [more] |
| A0A6J1IVF8 | 1.38e-07 | 79.41 | 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like isoform X1 OS=Cucurbita... | [more] |
| A0A6J1E901 | 1.38e-07 | 79.41 | 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like OS=Cucurbita moschata O... | [more] |
| A0A6J1DE52 | 2.57e-07 | 78.79 | 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like OS=Momordica charantia ... | [more] |
| A0A0A0L4G1 | 3.50e-07 | 63.04 | Fe2OG dioxygenase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
