MC11g_new0193 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC11g_new0193
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC11: 7376905 .. 7380000 (-)
RNA-Seq ExpressionMC11g_new0193
SyntenyMC11g_new0193
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CACAGAGCTAGATTTACCTTGGTTATTTAAAAGAAGTAAGAACATTTACATTACTCCATATAAATATAAGCTAAATAAATACATAATGATTTCTGTTGATGCTTGGATTTTTGTTTCCCGATTCTCTCCAAAATGGGCACCAAACTTGGTTATCAAGGGATCGAATACCTGCAAAACTGAATAACCCTAAATCGGTTTGACTTCTGCCACATGGGCTCCGATACCTAAGTTAGCTATAAGAGAATCACTAAACAAGCAATAAGCAAGCAGGATACTTGAAGTGTAATTCAGTTTATCTTCAATGAGTGAGTTCCCCTCTATCTATGATTAATCTTCCCCTTAGGGTTTCATGAACTCCAACCCTAGGTCATCTCTAGACAGTCGGGCTTACTGGGTCGAGATTCATGCGGGCCCTTTTATTAGGTTTGAGCTCAAACATCGATTGGTTGACATTAGGATCGGGAGAGAGCTCGAGAACCTTCTCGACCTAAAGCCGAGGAGCTCTCGATGCTGATGTGGGGTTCGACTCTCAAGTGGGCTGGCCCTTGTGCTCTGGGTCGACCCCGGTTGTCGGTGGTAACGATTTTTCCTTCTTCTTTTACGGTCCACTCCCTATTCTCCTATGAACCGTTTTGTTCCCTACAACTGTTTCTAATCTTTTAAGATTTTACTTTTCAATTTAGTCCTTGATCTATTAAAATTCTCAAATTTATTGTTAATGTATTAAAAATACTCAATTAATTAGAACACTTCATACCAAAACTTAATCTTTAACATAAATTAATGTGTCATTAAATTATTATTTTATCAATACATTTGAACATTAAAAAAATGCCAATTAAAGTTTAGAAAAAATTTAAAGGGACCAAATAAATATAAAATTGAAACCATGCAATAGAATCTTCTAAATTCAACAACATGGAACACATACATATACATATACAGAGGAACAAAAATGAGAGAATATTACATTACAAATACAAAACCAAACCAAACCAAACCAACACAACACTGGTCATTAATGGCTTAATTTAAATACTATGAAGTGTGATGATTGAAAAGAGAAAAAAAAAAAGCAATTATTGGAGTAATTACTCTCAATTTTATTCACAAACCCTAGAAGTAAAAGTAAGAAATTTATTTTAATTTATTTTTCTTCTCAAGTAAATGCAATACCGCCATTAATGACCATACTTAGAACCACAACTGCAAAGGTACCCAACAAAATTGCTGACGGAGACGTGGCTATGGCGGACGATCGCGGTGGTCCTGTTGTTCTGTCATTCGCCGCACCGCTTCCTGACCCACTCGGCGATGGCCCCGGTGATCCTGATGACGACGATCCCGGAGGTAATGGTGGCGACGGAGGCGAACTTGCCGGGCCACTGGACTCCGGCGGCAGTAGCGACGGTACTGGGGAGCCGAATGGTACCGCCGCCGGAGCTGTTGTGGGGGTTATGGCGCCGGCCGGAGATGGTGAAGTTGTCGGAGATTTTGTTCCGGAAGATGGTGAGCCTGCTGGAGATGGGTACGCTGTCGAGGATGGTGAGCCCGCCGGAGATGTTCCGGGGCCGGCAGCGCCACCGGGGAACGGCGAAGGGGGGGACCCCGACGGAGAGTTTGCTCCGGGAGAGCCGTACGGCGAAGTGTGGGACACTGAGGGAGAGCCAGACGACGGAGCTCCTGACGGAGAGTTCGCTCCCGGAATCGACGAAGAGGGAGAACCGGCCGGAGATGGTGTCGTCACCGGAGTTTCAGACCCTGAAGGTGACGGCGAAGTGGGTGTCCCCGACGACGGAGCTCCTGAAGGAGATTTCGCTCCCGGAATCGACGAAGAGGGAGAACCGGCTGGAGCGGGTGTTGTCACCGGAGTTTCAGACCCAGAAGGCGACGGCGAAGTGGGTGTTCCCGACGGCGGAGCTCCTAAAGGAGATTTCGCTCCAGGATACGGCGAACCAGGAGAACCTGCCGGCGTTGGTGTCGTCACCGGGGTTTCAGACCCAGAAGGCGACGGCGAAGTGGGTGTTCCCGACGGCGGAGCTCCTGACGGAGATTTCGCTCCCGGAATCGGCGAAGAGGGAGAACCAGCCGGTGCTGGCGTCGTCACCGGAGTTTCAGACCCAGAAGGCGACGGTGAAGTGGGTGTCCCCGACGGCGGAGCTCCGGACGGAGATTTCGCTCCGGGATACGGCGAACCAGGAGAACCTGCCGGTGTTGGTGTCGTCACCGGCGTTTGAAACCCAGAAGGCGACGGCGAACTGGGCGTCCCCGACGGCGGAGAGCCGGACGGAGATTTGGCTCCGGGATACGGCGAACCAGGAGAACCAGAGGGAGACGGCGAGCCAGAACCAGGTTTCGGAGACTCGGCTCCAGGAGGCGAATGCGACGGCGGCGAAGGAACGACCGGCAGCGGCGACGGAGGAGGCCTTACAGCAAGAACAACGACCACCAATTTCTGGCCCTTCTCACAGCTCCCATCTTTGCCACTAACAAAATAAAAAGGCCCACTCCGATCAAATCTGAACTCCGAATTCCCATCCTTCAATTTCACAATCGGATTCTTCAAATTACACTGCTCATAATCCTCTTTACTCACCACCAACACAGAATCCACCCCCTTCGCATACTTGAACACTAAACCCAAACCCACCAAATCAAAAAATCATCAGCCATGGCAATCAAAATCAAATCAAATCAAATAAAAACTCGAATTCATCTAACAAATTAAGACTCACCCAGAACGTCATTGACATTGAATCTGTTTCTCTGAGCCCAAGAGTTGTAGTCCTGAGAGGGGTTGAGGACCCACCCGTCTTTGCCGCCCACATAGAAGGTGTAAGCTTCACAGAGGGACACAAAACAGGGGACCAGAATGCACAGAGAGAACCACAGAGATTTTGAATTGGGCGACGCCATTGATTGAAGAGGGCAGGAGAGAGAAAATCCGATGGGGTTCTAGAGAGAGAGAAACGGAGGGAATATATAGGGCCGGTGGAGGAGGTGACCGTTGAAGTGTGGAGATTTCGGGAGAAAGCGTGTAGGAGAAAATCAGAGTGTACGGACACTGAAACGACATGTCGGCAAATTAAGAGTGGG

mRNA sequence

ATGGCCCCGGTGATCCTGATGACGACGATCCCGGAGGTAATGGTGGCGACGGAGGCGAACTTGCCGGGCCACTGGACTCCGGCGGCAGTAGCGACGGTACTGGGGAGCCGAATGGTACCGCCGCCGGAGCTGTTGTGGGGGTTATGGCGCCGGCCGGAGATGGTGAAGTTGTCGGAGATTTTGTTCCGGAAGATGGTGAGCCTGCTGGAGATGGGTACGCTGTCGAGGATGGTGAGCCCGCCGGAGATGTTCCGGGGCCGGCAGCGCCACCGGGGAACGGCGAAGGGGGGGACCCCGACGGAGAGTTTGCTCCGGGAGAGCCGTACGGCGAAGTGTGGGACACTGAGGGAGAGCCAGACGACGGAGCTCCTGACGGAGAGTTCGCTCCCGGAATCGACGAAGAGGGAGAACCGGCCGGAGATGGTGTCGTCACCGGAGTTTCAGACCCTGAAGGTGACGGCGAAGTGGGTGTCCCCGACGACGGAGCTCCTGAAGGAGATTTCGCTCCCGGAATCGACGAAGAGGGAGAACCGGCTGGAGCGGGTGTTGTCACCGGAGTTTCAGACCCAGAAGGCGACGGCGAAGTGGGTGTTCCCGACGGCGGAGCTCCTGACGGAGATTTCGCTCCCGGAATCGGCGAAGAGGGAGAACCAGCCGGTGCTGGCGTCGTCACCGGAGTTTCAGACCCAGAAGGCGACGGTGAAGTGGGTGTCCCCGACGGCGGAGCTCCGGACGGAGATTTCGCTCCGGGATACGGCGAACCAGGAGAACCTGCCGGTGTTGGTGTCGTCACCGGCGTTTGAAACCCAGAAGGCGACGGCGAACTGGGCGTCCCCGACGGCGGAGAGCCGGACGGAGATTTGGCTCCGGGATACGGCGAACCAGGAGAACCAGAGGGAGACGGCGAGCCAGAACCAGGTTTCGGAGACTCGGCTCCAGGAGGCGAATGCGACGGCGGCGAAGGAACGACCGGCAGCGGCGACGGAGGAGGCCTTACAGCAAGAACAACGACCACCAATTTCTGGCCCTTCTCACAGCTCCCATCTTTGCCACTAA

Coding sequence (CDS)

ATGGCCCCGGTGATCCTGATGACGACGATCCCGGAGGTAATGGTGGCGACGGAGGCGAACTTGCCGGGCCACTGGACTCCGGCGGCAGTAGCGACGGTACTGGGGAGCCGAATGGTACCGCCGCCGGAGCTGTTGTGGGGGTTATGGCGCCGGCCGGAGATGGTGAAGTTGTCGGAGATTTTGTTCCGGAAGATGGTGAGCCTGCTGGAGATGGGTACGCTGTCGAGGATGGTGAGCCCGCCGGAGATGTTCCGGGGCCGGCAGCGCCACCGGGGAACGGCGAAGGGGGGGACCCCGACGGAGAGTTTGCTCCGGGAGAGCCGTACGGCGAAGTGTGGGACACTGAGGGAGAGCCAGACGACGGAGCTCCTGACGGAGAGTTCGCTCCCGGAATCGACGAAGAGGGAGAACCGGCCGGAGATGGTGTCGTCACCGGAGTTTCAGACCCTGAAGGTGACGGCGAAGTGGGTGTCCCCGACGACGGAGCTCCTGAAGGAGATTTCGCTCCCGGAATCGACGAAGAGGGAGAACCGGCTGGAGCGGGTGTTGTCACCGGAGTTTCAGACCCAGAAGGCGACGGCGAAGTGGGTGTTCCCGACGGCGGAGCTCCTGACGGAGATTTCGCTCCCGGAATCGGCGAAGAGGGAGAACCAGCCGGTGCTGGCGTCGTCACCGGAGTTTCAGACCCAGAAGGCGACGGTGAAGTGGGTGTCCCCGACGGCGGAGCTCCGGACGGAGATTTCGCTCCGGGATACGGCGAACCAGGAGAACCTGCCGGTGTTGGTGTCGTCACCGGCGTTTGAAACCCAGAAGGCGACGGCGAACTGGGCGTCCCCGACGGCGGAGAGCCGGACGGAGATTTGGCTCCGGGATACGGCGAACCAGGAGAACCAGAGGGAGACGGCGAGCCAGAACCAGGTTTCGGAGACTCGGCTCCAGGAGGCGAATGCGACGGCGGCGAAGGAACGACCGGCAGCGGCGACGGAGGAGGCCTTACAGCAAGAACAACGACCACCAATTTCTGGCCCTTCTCACAGCTCCCATCTTTGCCACTAA

Protein sequence

MAPVILMTTIPEVMVATEANLPGHWTPAAVATVLGSRMVPPPELLWGLWRRPEMVKLSEILFRKMVSLLEMGTLSRMVSPPEMFRGRQRHRGTAKGGTPTESLLRESRTAKCGTLRESQTTELLTESSLPESTKRENRPEMVSSPEFQTLKVTAKWVSPTTELLKEISLPESTKRENRLERVLSPEFQTQKATAKWVFPTAELLTEISLPESAKRENQPVLASSPEFQTQKATVKWVSPTAELRTEISLRDTANQENLPVLVSSPAFETQKATANWASPTAESRTEIWLRDTANQENQRETASQNQVSETRLQEANATAAKERPAAATEEALQQEQRPPISGPSHSSHLCH
Homology
[Close]
BLAST of MC11g_new0193 vs. NCBI nr
Match: KAG6591954.1 (hypothetical protein SDJN03_14300, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 62.0 bits (149), Expect = 7.84e-07
Identity = 40/95 (42.11%), Postives = 48/95 (50.53%), Query Frame = 0 

Query: 188 QTQKATAKWVFPTAELLTEISLPESAKRENQPVLASSPEFQTQKATVKWVSPTAELRTEI 247
           +TQ  TAKWVFP++E    I+LP+  K E +P L  S EFQT+    KW  P  E     
Sbjct: 186 RTQMETAKWVFPSSE----IALPDLMK-EIRPGLVWSLEFQTRMEKAKWAFPATE----- 245

Query: 248 SLRDTANQENLPVLVSSPAFETQKATANWASPTAE 282
                    N P L  SP F+TQ  TANW  P  E
Sbjct: 246 ------KWGNRPALAWSPEFQTQTETANWVFPMVE 264

[Close]
BLAST of MC11g_new0193 vs. ExPASy TrEMBL
Match: A0A2H2XKX5 (Uncharacterized protein OS=Calothrix sp. NIES-4071 OX=2005469 GN=NIES4071_69360 PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 9.65e-04
Identity = 41/133 (30.83%), Postives = 67/133 (50.38%), Query Frame = 0 

Query: 159 PTTELLKEISLPESTKRENRLE--RVLSPEFQTQKATAKWVFPTAELLTEISLPESAKRE 218
           PTTEL  EI   E++  EN L    + + + +T+ +T +   PT EL  E +  E++  E
Sbjct: 269 PTTELASEIIDTETSTEENTLPTTELATEDTETETSTEENTLPTTELGIEDTETETSTEE 328

Query: 219 NQ--PVLASSPEFQTQKATVKWVSPTAELRTEISLRDTANQENLPVLVSSPAFETQKATA 278
           N+      +S + +T+ +  +   PT EL +EI   +T  QEN P  +   +  T+  T 
Sbjct: 329 NRLPKTELASEDTETETSAEENAPPTIELASEIIDTETQTQENAPPTIELASEITETETQ 388

Query: 279 NWASPTAESRTEI 287
             A PT E  +E+
Sbjct: 389 ENALPTIELASEV 401

[Close]
BLAST of MC11g_new0193 vs. ExPASy TrEMBL
Match: A0A1Z4T2L3 (Uncharacterized protein OS=Calothrix sp. NIES-4105 OX=2005463 GN=NIES4105_69310 PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 9.65e-04
Identity = 41/133 (30.83%), Postives = 67/133 (50.38%), Query Frame = 0 

Query: 159 PTTELLKEISLPESTKRENRLE--RVLSPEFQTQKATAKWVFPTAELLTEISLPESAKRE 218
           PTTEL  EI   E++  EN L    + + + +T+ +T +   PT EL  E +  E++  E
Sbjct: 269 PTTELASEIIDTETSTEENTLPTTELATEDTETETSTEENTLPTTELGIEDTETETSTEE 328

Query: 219 NQ--PVLASSPEFQTQKATVKWVSPTAELRTEISLRDTANQENLPVLVSSPAFETQKATA 278
           N+      +S + +T+ +  +   PT EL +EI   +T  QEN P  +   +  T+  T 
Sbjct: 329 NRLPKTELASEDTETETSAEENAPPTIELASEIIDTETQTQENAPPTIELASEITETETQ 388

Query: 279 NWASPTAESRTEI 287
             A PT E  +E+
Sbjct: 389 ENALPTIELASEV 401

The following BLAST results are available for this feature:
BLAST of MC11g_new0193 vs.
Match NameE-valueIdentityDescription
BLAST of MC11g_new0193 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6591954.17.84e-0742.11hypothetical protein SDJN03_14300, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of MC11g_new0193 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A2H2XKX59.65e-0430.83Uncharacterized protein OS=Calothrix sp. NIES-4071 OX=2005469 GN=NIES4071_69360 ... [more]
A0A1Z4T2L39.65e-0430.83Uncharacterized protein OS=Calothrix sp. NIES-4105 OX=2005463 GN=NIES4105_69310 ... [more]
BLAST of MC11g_new0193 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..104
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 294..315
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 334..351
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 294..351
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 118..142

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC11g_new0193.1MC11g_new0193.1mRNA