Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAACCAATTGTCCTAAAAGAATGAACATTCTGATCTGGATTCTTTTAAACAGCAGCAGCATTAATGCGATGGATGTTCTTAAATGGAAGCTTTCTTATTCTCAGCTTTTGCCTTCAGTTTGTTTCCTCTGTTTTGCAGATTCTGAAAACCAAAATCACCTCCTTTTTGGCTGTTCTTTGTCCCTGAAGTGCTGGTTCTGGGTTTTAAAAAAGTTTTGGATTCTTTGGGCCTTCTCAAATGACTACAAGAATAATGTTTTGAATCTCTTGGTTGGGCCGTCTCTATCACCAAAAGCTCATCCAACAAAGTCAAAGCTAATAGTTCAGAATTATGGTTGGAACGTAACCATATAATCTTTCAAAAAAAGATTTGCTGCTCATTGGATCAGTTTGACATGGCTTCTTAAAGAGCCTCACAGTAGCGTTCTCTTTCTAATACTTTTTTGGACTATAATTTTGTTGATATTTCCTTAAACTGGGAAGCATTTATT
mRNA sequence
AAAACCAATTGTCCTAAAAGAATGAACATTCTGATCTGGATTCTTTTAAACAGCAGCAGCATTAATGCGATGGATGTTCTTAAATGGAAGCTTTCTTATTCTCAGCTTTTGCCTTCAGTTTGTTTCCTCTGTTTTGCAGATTCTGAAAACCAAAATCACCTCCTTTTTGGCTGTTCTTTGTCCCTGAAGTGCTGGTTCTGGGTTTTAAAAAAGTTTTGGATTCTTTGGGCCTTCTCAAATGACTACAAGAATAATGTTTTGAATCTCTTGGTTGGGCCGTCTCTAAAAAGCTCATCCAACAAAGTCAAAGCTAATAGTTCAGAATTATGGTTGGAACGTAACCATATAATCTTTCAAAAAAAGATTTGCTGCTCATTGGATCAGTTTGACATGGCTTTAAAGAGCCTCACACGTTCTCTTTCTAATACTTTTTTGGACTATAATTTTGTTGATATTTCCTTAAACTGGGAAGCATTTATT
Coding sequence (CDS)
AAAACCAATTGTCCTAAAAGAATGAACATTCTGATCTGGATTCTTTTAAACAGCAGCAGCATTAATGCGATGGATGTTCTTAAATGGAAGCTTTCTTATTCTCAGCTTTTGCCTTCAGTTTGTTTCCTCTGTTTTGCAGATTCTGAAAACCAAAATCACCTCCTTTTTGGCTGTTCTTTGTCCCTGAAGTGCTGGTTCTGGGTTTTAAAAAAGTTTTGGATTCTTTGGGCCTTCTCAAATGACTACAAGAATAATGTTTTGAATCTCTTGGTTGGGCCGTCTCTAAAAAGCTCATCCAACAAAGTCAAAGCTAATAGTTCAGAATTATGGTTGGAACGTAACCATATAATCTTTCAAAAAAAGATTTGCTGCTCATTGGATCAGTTTGACATGGCTTTAAAGAGCCTCACACGTTCTCTTTCTAATACTTTTTTGGACTATAATTTTGTTGATATTTCCTTAAACTGGGAAGCATTTATT
Protein sequence
KTNCPKRMNILIWILLNSSSINAMDVLKWKLSYSQLLPSVCFLCFADSENQNHLLFGCSLSLKCWFWVLKKFWILWAFSNDYKNNVLNLLVGPSLKSSSNKVKANSSELWLERNHIIFQKKICCSLDQFDMALKSLTRSLSNTFLDYNFVDISLNWEAFI
Homology
BLAST of MC11g1207 vs. NCBI nr
Match:
XP_038903695.1 (uncharacterized protein LOC120090219 [Benincasa hispida])
HSP 1 Score: 104 bits (259), Expect = 1.98e-23
Identity = 66/167 (39.52%), Postives = 88/167 (52.69%), Query Frame = 0
Query: 1 KTNCPKRMNILIWILLNSSSINAMDVLKWKLSYSQLLPSVCFLCFADSENQNHLLFGCSL 60
KT P+R+NILIWI+L +N +VL+ K L P+VC C SE HL F C
Sbjct: 149 KTKSPRRVNILIWIML-FGQLNVAEVLQKKQPTPSLSPTVCPFCLHHSEVSLHLFFTCPY 208
Query: 61 SLKCWFWVLKKFWILWAFSNDYKNNVLNLLVGPSLKSSS-----NKVKANSSELWLERNH 120
S CW +L F + ND+K+NV LL P+ S+ N VKA ++LW ERN
Sbjct: 209 SSWCWNKLLCFFNLPLTLCNDFKSNVFQLLARPTSHKSTRLLWCNAVKALLADLWFERNQ 268
Query: 121 IIFQKKICCSLDQFDMALKSLTR--SLSNTFLDYNFVDISLNWEAFI 160
IF K D+ + A + + LS+ F Y+ D +LNWEAFI
Sbjct: 269 RIFYNKATSCQDRLEAARRQASSWCLLSDPFRAYSLSDFNLNWEAFI 314
BLAST of MC11g1207 vs. NCBI nr
Match:
XP_022153214.1 (uncharacterized protein LOC111020765 [Momordica charantia])
HSP 1 Score: 99.4 bits (246), Expect = 1.56e-22
Identity = 65/168 (38.69%), Postives = 87/168 (51.79%), Query Frame = 0
Query: 1 KTNCPKRMNILIWILLNSSSINAMDVLKWKLSYSQLLPSVCFLCFADSENQNHLLFGCSL 60
KT P+R+N+ WIL +N D+++ K LLPS C LC E+ +HL F C
Sbjct: 34 KTKSPRRVNVFCWILFQGK-LNTADIIQKKSPSDALLPSFCCLCTKSGEDHDHLFFHCYF 93
Query: 61 SLKCWFWVLKKFWILWAFSNDYKNNVLNLLVGPSLKSSS------NKVKANSSELWLERN 120
+ KCW + +F + W F +NV LL GP SSS N VKA SELW ERN
Sbjct: 94 ASKCWNLLFHQFNVDWCFDLKAGDNVYQLLHGPPHLSSSVRFLWLNVVKALLSELWFERN 153
Query: 121 HIIFQKKICCSLDQFDMAL--KSLTRSLSNTFLDYNFVDISLNWEAFI 160
+F++K + F A SL SL ++FL ++ I NW AFI
Sbjct: 154 SRLFEEKRRLFDESFYSAKFKASLWCSLVDSFLHHSPSMIYANWGAFI 200
BLAST of MC11g1207 vs. NCBI nr
Match:
KAA0062564.1 (GPI-anchor transamidase isoform X1 [Cucumis melo var. makuwa])
HSP 1 Score: 88.6 bits (218), Expect = 5.54e-17
Identity = 54/158 (34.18%), Postives = 86/158 (54.43%), Query Frame = 0
Query: 11 LIWILLNSSSINAMD-VLKWKLSYSQLLPSVCFLCFADSENQNHLLFGCSLSLKCWFWVL 70
+ W L +S+ + V++ +L S L+PS C LC + E+ L F C S+KCW +L
Sbjct: 542 IFWFLHHSNFVIVGSLVMQRELLNSCLMPSACSLCLEEGEDLQPL-FTCPYSVKCWENLL 601
Query: 71 KKFWILWAFSNDYKNNVLNLLVGPSLKSS-----SNKVKANSSELWLERNHIIFQKKICC 130
F + WAF + +N+ +L+G SLK N KA S++W E N IF+ K+
Sbjct: 602 SLFGVDWAFDGSFNSNIKQILLGSSLKEGPRLIWGNMSKALLSDIWFECNQRIFRGKVMH 661
Query: 131 SLDQFDMALKSLTR--SLSNTFLDYNFVDISLNWEAFI 160
++ D+A ++ L+ F+DY+ D+S+NW AFI
Sbjct: 662 WSERLDIAKRNAATWCMLNKEFIDYSIQDLSVNWLAFI 698
BLAST of MC11g1207 vs. NCBI nr
Match:
XP_034223765.1 (THO complex subunit 1 isoform X5 [Prunus dulcis])
HSP 1 Score: 60.8 bits (146), Expect = 2.36e-07
Identity = 49/168 (29.17%), Postives = 74/168 (44.05%), Query Frame = 0
Query: 1 KTNCPKRMNILIWILLNSSSINAMDVLKWKLSYSQLLPSVCFLCFADSENQNHLLFGCSL 60
K P ++ +W+ N IN D ++ + L PS C LC ++EN +HL CS
Sbjct: 449 KAKTPPKIQFFVWLAANGR-INTCDCIQRRQPKMCLSPSWCVLCKENAENIDHLFIHCSY 508
Query: 61 SLKCWFWVLKKFWILWAFSND-YKNNVLNLLVGPSLKSSSNK------VKANSSELWLER 120
SLK W+ +L W ++ +NL V K V A +W+ER
Sbjct: 509 SLKLWWRMLGALRAEWVIPKGCFELLSINLRVSGKGKGKRAGILHDCLVHAIFGNIWMER 568
Query: 121 NHIIFQKKICCSLDQFDMALK---SLTRSLSNTFLDYNFVDISLNWEA 158
N IFQ I +++ +K SL S+S F DY++ I + A
Sbjct: 569 NRRIFQGHIGVRVEELWDRIKFWASLWASVSGQFKDYHYSTIMRDMMA 615
BLAST of MC11g1207 vs. NCBI nr
Match:
XP_034223763.1 (THO complex subunit 1 isoform X4 [Prunus dulcis])
HSP 1 Score: 60.8 bits (146), Expect = 2.38e-07
Identity = 49/168 (29.17%), Postives = 74/168 (44.05%), Query Frame = 0
Query: 1 KTNCPKRMNILIWILLNSSSINAMDVLKWKLSYSQLLPSVCFLCFADSENQNHLLFGCSL 60
K P ++ +W+ N IN D ++ + L PS C LC ++EN +HL CS
Sbjct: 474 KAKTPPKIQFFVWLAANGR-INTCDCIQRRQPKMCLSPSWCVLCKENAENIDHLFIHCSY 533
Query: 61 SLKCWFWVLKKFWILWAFSND-YKNNVLNLLVGPSLKSSSNK------VKANSSELWLER 120
SLK W+ +L W ++ +NL V K V A +W+ER
Sbjct: 534 SLKLWWRMLGALRAEWVIPKGCFELLSINLRVSGKGKGKRAGILHDCLVHAIFGNIWMER 593
Query: 121 NHIIFQKKICCSLDQFDMALK---SLTRSLSNTFLDYNFVDISLNWEA 158
N IFQ I +++ +K SL S+S F DY++ I + A
Sbjct: 594 NRRIFQGHIGVRVEELWDRIKFWASLWASVSGQFKDYHYSTIMRDMMA 640
BLAST of MC11g1207 vs. ExPASy TrEMBL
Match:
A0A6J1DIE2 (uncharacterized protein LOC111020765 OS=Momordica charantia OX=3673 GN=LOC111020765 PE=4 SV=1)
HSP 1 Score: 99.4 bits (246), Expect = 7.56e-23
Identity = 65/168 (38.69%), Postives = 87/168 (51.79%), Query Frame = 0
Query: 1 KTNCPKRMNILIWILLNSSSINAMDVLKWKLSYSQLLPSVCFLCFADSENQNHLLFGCSL 60
KT P+R+N+ WIL +N D+++ K LLPS C LC E+ +HL F C
Sbjct: 34 KTKSPRRVNVFCWILFQGK-LNTADIIQKKSPSDALLPSFCCLCTKSGEDHDHLFFHCYF 93
Query: 61 SLKCWFWVLKKFWILWAFSNDYKNNVLNLLVGPSLKSSS------NKVKANSSELWLERN 120
+ KCW + +F + W F +NV LL GP SSS N VKA SELW ERN
Sbjct: 94 ASKCWNLLFHQFNVDWCFDLKAGDNVYQLLHGPPHLSSSVRFLWLNVVKALLSELWFERN 153
Query: 121 HIIFQKKICCSLDQFDMAL--KSLTRSLSNTFLDYNFVDISLNWEAFI 160
+F++K + F A SL SL ++FL ++ I NW AFI
Sbjct: 154 SRLFEEKRRLFDESFYSAKFKASLWCSLVDSFLHHSPSMIYANWGAFI 200
BLAST of MC11g1207 vs. ExPASy TrEMBL
Match:
A0A5A7V5N8 (GPI-anchor transamidase isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G00520 PE=3 SV=1)
HSP 1 Score: 88.6 bits (218), Expect = 2.68e-17
Identity = 54/158 (34.18%), Postives = 86/158 (54.43%), Query Frame = 0
Query: 11 LIWILLNSSSINAMD-VLKWKLSYSQLLPSVCFLCFADSENQNHLLFGCSLSLKCWFWVL 70
+ W L +S+ + V++ +L S L+PS C LC + E+ L F C S+KCW +L
Sbjct: 542 IFWFLHHSNFVIVGSLVMQRELLNSCLMPSACSLCLEEGEDLQPL-FTCPYSVKCWENLL 601
Query: 71 KKFWILWAFSNDYKNNVLNLLVGPSLKSS-----SNKVKANSSELWLERNHIIFQKKICC 130
F + WAF + +N+ +L+G SLK N KA S++W E N IF+ K+
Sbjct: 602 SLFGVDWAFDGSFNSNIKQILLGSSLKEGPRLIWGNMSKALLSDIWFECNQRIFRGKVMH 661
Query: 131 SLDQFDMALKSLTR--SLSNTFLDYNFVDISLNWEAFI 160
++ D+A ++ L+ F+DY+ D+S+NW AFI
Sbjct: 662 WSERLDIAKRNAATWCMLNKEFIDYSIQDLSVNWLAFI 698
BLAST of MC11g1207 vs. ExPASy TrEMBL
Match:
A0A5A7T2Y0 (zf-RVT domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold403G00100 PE=4 SV=1)
HSP 1 Score: 75.9 bits (185), Expect = 6.16e-13
Identity = 52/165 (31.52%), Postives = 84/165 (50.91%), Query Frame = 0
Query: 1 KTNCPKRMNILIWILLNSSSINAMDVLKWKLSYSQLLPSVCFLCFADSENQNHLLFGCSL 60
++ P+R+NILIWI++ I++ ++L+ K S + PS+C LC S+N H+ C +
Sbjct: 219 QSGSPRRINILIWIMVFRFVISS-EILQKK-SPINVSPSICPLCLKASKNLPHIFLYCPV 278
Query: 61 SLKCWFWVLKKFWILWAFSNDYKNNVLNLLVGPSLKSSSNKV-----KANSSELWLERNH 120
S W + F ++W F + +V+ LL G +L + + KA E+W+ERN
Sbjct: 279 SSFGWERIFSLFNLVWNFDSSLSASVIQLLSGSNLPKTPRIIWEILSKALLIEIWIERNQ 338
Query: 121 IIFQKKICCSLDQFDMALKSLTR--SLSNTFLDYNFVDISLNWEA 158
IF K + A + SL F++Y+ DI LNW A
Sbjct: 339 RIFHDKARQRAEIMHAADLNAAAWCSLRKEFVNYSIQDICLNWNA 381
BLAST of MC11g1207 vs. ExPASy TrEMBL
Match:
M5XV38 (zf-RVT domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_ppa019854mg PE=4 SV=1)
HSP 1 Score: 60.8 bits (146), Expect = 1.08e-07
Identity = 47/166 (28.31%), Postives = 76/166 (45.78%), Query Frame = 0
Query: 1 KTNCPKRMNILIWILLNSSSINAMDVLKWKLSYSQLLPSVCFLCFADSENQNHLLFGCSL 60
K P ++ +W+ N IN D ++ + L PS C LC ++EN +HL CS
Sbjct: 302 KAKTPPKIQFFVWLAANGR-INTCDCIQRRQPKMCLSPSWCVLCKENAENIDHLFIHCSY 361
Query: 61 SLKCWFWVLKKFWILWAFSND-YKNNVLNLLVGPSLKSSSNK----VKANSSELWLERNH 120
SL+ W+ +L + W ++ +NL + K + V A +W+ERN
Sbjct: 362 SLRLWWKMLGALGVEWVIPKGCFELLSINLRISGKGKRAGILRDCLVHAIFWNIWMERNQ 421
Query: 121 IIFQKKICCSLDQFDMALK---SLTRSLSNTFLDYNFVDISLNWEA 158
IFQ I +++ +K SL S+S F DY++ I + A
Sbjct: 422 RIFQGHIGVRVEELWDRIKFWASLWASVSGQFKDYHYSTIMRDMMA 466
BLAST of MC11g1207 vs. ExPASy TrEMBL
Match:
M5WJ76 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa015871mg PE=4 SV=1)
HSP 1 Score: 60.8 bits (146), Expect = 1.27e-07
Identity = 47/166 (28.31%), Postives = 76/166 (45.78%), Query Frame = 0
Query: 1 KTNCPKRMNILIWILLNSSSINAMDVLKWKLSYSQLLPSVCFLCFADSENQNHLLFGCSL 60
K P ++ +W+ N IN D ++ + L PS C LC ++EN +HL CS
Sbjct: 1332 KAKTPPKIQFFVWLAANGR-INTCDCIQRRQPKMCLSPSWCVLCKENAENIDHLFIHCSY 1391
Query: 61 SLKCWFWVLKKFWILWAFSND-YKNNVLNLLVGPSLKSSSNK----VKANSSELWLERNH 120
SL+ W+ +L + W ++ +NL + K + V A +W+ERN
Sbjct: 1392 SLRLWWKMLGALGVEWVIPKGCFELLSINLRISGKGKRAGILRDCLVHAIFWNIWMERNQ 1451
Query: 121 IIFQKKICCSLDQFDMALK---SLTRSLSNTFLDYNFVDISLNWEA 158
IFQ I +++ +K SL S+S F DY++ I + A
Sbjct: 1452 RIFQGHIGVRVEELWDRIKFWASLWASVSGQFKDYHYSTIMRDMMA 1496
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DIE2 | 7.56e-23 | 38.69 | uncharacterized protein LOC111020765 OS=Momordica charantia OX=3673 GN=LOC111020... | [more] |
A0A5A7V5N8 | 2.68e-17 | 34.18 | GPI-anchor transamidase isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C... | [more] |
A0A5A7T2Y0 | 6.16e-13 | 31.52 | zf-RVT domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27... | [more] |
M5XV38 | 1.08e-07 | 28.31 | zf-RVT domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_ppa019854mg ... | [more] |
M5WJ76 | 1.27e-07 | 28.31 | Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=... | [more] |
Match Name | E-value | Identity | Description | |