MC11g1030 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC11g1030
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC11: 8840916 .. 8841278 (-)
RNA-Seq Expression	MC11g1030
Synteny	MC11g1030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTAGTGAGAACTGTAATGCCAGAGCAATGAACTCCTCCATTGCCTTGCTGCAGGAGAGATTTAGACAATTGCAGAAAGCTAAGGAGTTGAGAGAGCAGAAAGAGTTTCGAAGGATGTCGTCTGAGGCGATACAGGCCAATACAGGCGTTTGCTCCGAGCAAACTGGCTTGTTTTTCCATTCTGAACTAGTTCTTCCACCTAGGCCACCATTCCAAGGCTCTTCGTACCATCAGCCAATCTTGGAAAGCAGAAAATCTCATCTTCAAGTCACAGATAATATTGACATGGGGTCAAGAGATACAGTCATGCACAGAACAAACTGTGTTGATGATTCAAATATTGACACCTCTCTTCATCTG

mRNA sequence

ATGGGTAGTGAGAACTGTAATGCCAGAGCAATGAACTCCTCCATTGCCTTGCTGCAGGAGAGATTTAGACAATTGCAGAAAGCTAAGGAGTTGAGAGAGCAGAAAGAGTTTCGAAGGATGTCGTCTGAGGCGATACAGGCCAATACAGGCGTTTGCTCCGAGCAAACTGGCTTGTTTTTCCATTCTGAACTAGTTCTTCCACCTAGGCCACCATTCCAAGGCTCTTCGTACCATCAGCCAATCTTGGAAAGCAGAAAATCTCATCTTCAAGTCACAGATAATATTGACATGGGGTCAAGAGATACAGTCATGCACAGAACAAACTGTGTTGATGATTCAAATATTGACACCTCTCTTCATCTG

Coding sequence (CDS)

ATGGGTAGTGAGAACTGTAATGCCAGAGCAATGAACTCCTCCATTGCCTTGCTGCAGGAGAGATTTAGACAATTGCAGAAAGCTAAGGAGTTGAGAGAGCAGAAAGAGTTTCGAAGGATGTCGTCTGAGGCGATACAGGCCAATACAGGCGTTTGCTCCGAGCAAACTGGCTTGTTTTTCCATTCTGAACTAGTTCTTCCACCTAGGCCACCATTCCAAGGCTCTTCGTACCATCAGCCAATCTTGGAAAGCAGAAAATCTCATCTTCAAGTCACAGATAATATTGACATGGGGTCAAGAGATACAGTCATGCACAGAACAAACTGTGTTGATGATTCAAATATTGACACCTCTCTTCATCTG

Protein sequence

MGSENCNARAMNSSIALLQERFRQLQKAKELREQKEFRRMSSEAIQANTGVCSEQTGLFFHSELVLPPRPPFQGSSYHQPILESRKSHLQVTDNIDMGSRDTVMHRTNCVDDSNIDTSLHL

Homology

[Close]

BLAST of MC11g1030 vs. NCBI nr
Match: KAE8645981.1 (hypothetical protein Csa_015491 [Cucumis sativus])

HSP 1 Score: 207 bits (527), Expect = 9.33e-67
Identity = 109/124 (87.90%), Postives = 115/124 (92.74%), Query Frame = 0


Query: 1   MGSENCNARAMNSSIALLQERFRQLQKAKELREQKEFRRMSSEAIQANTGVCSEQTGLFF 60
           M SENCNARAMNSSIALLQERFRQLQKAKELREQKEFRRMSSE+IQANT VCSEQTGL+F
Sbjct: 1   MSSENCNARAMNSSIALLQERFRQLQKAKELREQKEFRRMSSESIQANTAVCSEQTGLYF 60

Query: 61  HSELVLPPRPPFQGSSYHQPILESRKSHLQVTDNI---DMGSRDTVMHRTNCVDDSNIDT 120
           HSELVLPPR P QGSSY QP+LESRKSHLQVTDN+   D+GSR+ VMHRTNCVDDSNIDT
Sbjct: 61  HSELVLPPRSPLQGSSYLQPVLESRKSHLQVTDNLTLSDVGSREKVMHRTNCVDDSNIDT 120

[Close]

BLAST of MC11g1030 vs. NCBI nr
Match: KAA0048723.1 (hypothetical protein E6C27_scaffold43G00160 [Cucumis melo var. makuwa] >TYK07906.1 hypothetical protein E5676_scaffold265G00160 [Cucumis melo var. makuwa])

HSP 1 Score: 201 bits (510), Expect = 3.64e-64
Identity = 106/124 (85.48%), Postives = 111/124 (89.52%), Query Frame = 0


Query: 1   MGSENCNARAMNSSIALLQERFRQLQKAKELREQKEFRRMSSEAIQANTGVCSEQTGLFF 60
           M  ENCNARAMNSSIALLQERFRQLQKAKELREQKE RRMSSE+IQ NT VCSEQTGL+F
Sbjct: 1   MSRENCNARAMNSSIALLQERFRQLQKAKELREQKEIRRMSSESIQPNTAVCSEQTGLYF 60

Query: 61  HSELVLPPRPPFQGSSYHQPILESRKSHLQVTDNI---DMGSRDTVMHRTNCVDDSNIDT 120
           HSELVLPPR P QG SY QP+LESRKSHLQVTDN+   DMGSR+ VMHRTNCVDDSNIDT
Sbjct: 61  HSELVLPPRSPLQGPSYLQPVLESRKSHLQVTDNLTLSDMGSREKVMHRTNCVDDSNIDT 120

[Close]

BLAST of MC11g1030 vs. NCBI nr
Match: KAG6607761.1 (hypothetical protein SDJN03_01103, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 168 bits (426), Expect = 1.91e-51
Identity = 90/114 (78.95%), Postives = 102/114 (89.47%), Query Frame = 0


Query: 11  MNSSIALLQERFRQLQKAKELREQKEFRRMSSEAIQANTGVCSEQTGLFFHSELVLPPRP 70
           MNSSIALLQERFRQLQKAKELRE+KE + +SSE+I+AN+   SEQTGLFFHSELVLPP+ 
Sbjct: 5   MNSSIALLQERFRQLQKAKELRERKEVQNLSSESIRANSAAWSEQTGLFFHSELVLPPKS 64

Query: 71  PFQGSSYHQPILESRKSHLQVTDNI---DMGSRDTVMHRTNCVDDSNIDTSLHL 121
           PFQGSSY QP LESRKSHLQ+TD++   DMGSR+TVM+RTNCVDD NIDTSLHL
Sbjct: 65  PFQGSSYLQPSLESRKSHLQITDDLSLSDMGSRETVMNRTNCVDDLNIDTSLHL 118

[Close]

BLAST of MC11g1030 vs. NCBI nr
Match: KAF3950464.1 (hypothetical protein CMV_023789 [Castanea mollissima])

HSP 1 Score: 116 bits (291), Expect = 7.90e-31
Identity = 67/124 (54.03%), Postives = 86/124 (69.35%), Query Frame = 0


Query: 1   MGSENCNARAMNSSIALLQERFRQLQKAKELREQKEFRRMSSEAIQANTGVCSEQTGLFF 60
           MG ++C+A  ++SSIALLQERFRQLQ+AKE+RE +E  R+SSE  + N     + T LFF
Sbjct: 1   MGRQSCDATVIHSSIALLQERFRQLQRAKEMREARELLRLSSEPERVNPATLYDPTRLFF 60

Query: 61  HSELVLPPRPPFQGSSYHQPILESRKSHLQVTDNI---DMGSRDTVMHRTNCVDDSNIDT 120
           HSEL+ PPRP  QGS Y QP  +S+ + +QV D      +GS DTV  R N  DDS++DT
Sbjct: 61  HSELIYPPRPLPQGSLYLQPNFQSKHTDIQVKDTPFFGSLGSIDTVTDRKNDFDDSDVDT 120

[Close]

BLAST of MC11g1030 vs. NCBI nr
Match: XP_025015545.1 (uncharacterized protein LOC112536879 [Ricinus communis] >EEF29345.1 conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 115 bits (287), Expect = 3.20e-30
Identity = 64/124 (51.61%), Postives = 90/124 (72.58%), Query Frame = 0


Query: 1   MGSENCNARAMNSSIALLQERFRQLQKAKELREQKEFRRMSSEAIQANTGVCSEQTGLFF 60
           MG +NC+  +++SSIALLQERFRQL++AKE+R+Q+E  R+ SEA Q       EQ+  FF
Sbjct: 1   MGRQNCDPTSIHSSIALLQERFRQLERAKEMRQQRELLRLFSEAEQVKPPKAFEQSRPFF 60

Query: 61  HSELVLPPRPPFQGSSYHQPILESRKSHLQVTD---NIDMGSRDTVMHRTNCVDDSNIDT 120
           HSELVLP   P Q S Y QP +++R + LQ+ +   ++D+ S++TVMH TN  D+S++DT
Sbjct: 61  HSELVLPLGQPLQDSLYLQPNMQNRHAELQINETPNSVDLWSKNTVMHITNNFDESDVDT 120

[Close]

BLAST of MC11g1030 vs. ExPASy TrEMBL
Match: A0A0A0LBC7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G769680 PE=4 SV=1)

HSP 1 Score: 207 bits (527), Expect = 4.52e-67
Identity = 109/124 (87.90%), Postives = 115/124 (92.74%), Query Frame = 0


Query: 1   MGSENCNARAMNSSIALLQERFRQLQKAKELREQKEFRRMSSEAIQANTGVCSEQTGLFF 60
           M SENCNARAMNSSIALLQERFRQLQKAKELREQKEFRRMSSE+IQANT VCSEQTGL+F
Sbjct: 1   MSSENCNARAMNSSIALLQERFRQLQKAKELREQKEFRRMSSESIQANTAVCSEQTGLYF 60

Query: 61  HSELVLPPRPPFQGSSYHQPILESRKSHLQVTDNI---DMGSRDTVMHRTNCVDDSNIDT 120
           HSELVLPPR P QGSSY QP+LESRKSHLQVTDN+   D+GSR+ VMHRTNCVDDSNIDT
Sbjct: 61  HSELVLPPRSPLQGSSYLQPVLESRKSHLQVTDNLTLSDVGSREKVMHRTNCVDDSNIDT 120

[Close]

BLAST of MC11g1030 vs. ExPASy TrEMBL
Match: A0A5D3CC18 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00160 PE=4 SV=1)

HSP 1 Score: 201 bits (510), Expect = 1.76e-64
Identity = 106/124 (85.48%), Postives = 111/124 (89.52%), Query Frame = 0


Query: 1   MGSENCNARAMNSSIALLQERFRQLQKAKELREQKEFRRMSSEAIQANTGVCSEQTGLFF 60
           M  ENCNARAMNSSIALLQERFRQLQKAKELREQKE RRMSSE+IQ NT VCSEQTGL+F
Sbjct: 1   MSRENCNARAMNSSIALLQERFRQLQKAKELREQKEIRRMSSESIQPNTAVCSEQTGLYF 60

Query: 61  HSELVLPPRPPFQGSSYHQPILESRKSHLQVTDNI---DMGSRDTVMHRTNCVDDSNIDT 120
           HSELVLPPR P QG SY QP+LESRKSHLQVTDN+   DMGSR+ VMHRTNCVDDSNIDT
Sbjct: 61  HSELVLPPRSPLQGPSYLQPVLESRKSHLQVTDNLTLSDMGSREKVMHRTNCVDDSNIDT 120

[Close]

BLAST of MC11g1030 vs. ExPASy TrEMBL
Match: B9T468 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0423940 PE=4 SV=1)

HSP 1 Score: 115 bits (287), Expect = 1.55e-30
Identity = 64/124 (51.61%), Postives = 90/124 (72.58%), Query Frame = 0


Query: 1   MGSENCNARAMNSSIALLQERFRQLQKAKELREQKEFRRMSSEAIQANTGVCSEQTGLFF 60
           MG +NC+  +++SSIALLQERFRQL++AKE+R+Q+E  R+ SEA Q       EQ+  FF
Sbjct: 1   MGRQNCDPTSIHSSIALLQERFRQLERAKEMRQQRELLRLFSEAEQVKPPKAFEQSRPFF 60

Query: 61  HSELVLPPRPPFQGSSYHQPILESRKSHLQVTD---NIDMGSRDTVMHRTNCVDDSNIDT 120
           HSELVLP   P Q S Y QP +++R + LQ+ +   ++D+ S++TVMH TN  D+S++DT
Sbjct: 61  HSELVLPLGQPLQDSLYLQPNMQNRHAELQINETPNSVDLWSKNTVMHITNNFDESDVDT 120

[Close]

BLAST of MC11g1030 vs. ExPASy TrEMBL
Match: A0A067L442 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_01002 PE=4 SV=1)

HSP 1 Score: 109 bits (273), Expect = 2.06e-28
Identity = 62/124 (50.00%), Postives = 86/124 (69.35%), Query Frame = 0


Query: 1   MGSENCNARAMNSSIALLQERFRQLQKAKELREQKEFRRMSSEAIQANTGVCSEQTGLFF 60
           MG +NC+   ++SSIALLQERFRQL+KAKE+R+Q+E  R+ SEA Q  +    E +  FF
Sbjct: 1   MGRQNCDPTVIHSSIALLQERFRQLEKAKEMRQQRELLRLFSEAEQVQSAKDYEPSRPFF 60

Query: 61  HSELVLPPRPPFQGSSYHQPILESRKSHLQVTDN---IDMGSRDTVMHRTNCVDDSNIDT 120
           HSEL L P  P QGS Y QP +E++ + L V +    +++ S++TVMH  N  D+S++DT
Sbjct: 61  HSELTLSPGQPLQGSLYVQPNMENKYTDLPVNETPNLVNLWSKNTVMHNINNFDESDVDT 120

[Close]

BLAST of MC11g1030 vs. ExPASy TrEMBL
Match: A0A7J9FDZ1 (Uncharacterized protein OS=Gossypium trilobum OX=34281 GN=Gotri_001224 PE=4 SV=1)

HSP 1 Score: 103 bits (256), Expect = 6.57e-26
Identity = 57/112 (50.89%), Postives = 83/112 (74.11%), Query Frame = 0


Query: 10  AMNSSIALLQERFRQLQKAKELREQKEFRRMSSEAIQANTGVCSEQTGLFFHSELVLPPR 69
           A++SSIALLQERFR+LQ+AKELR+++E  R+ SEA + N G  +E + LFFHSEL+L PR
Sbjct: 8   AVHSSIALLQERFRRLQRAKELRQEREVLRLLSEAERINQGTTNEASQLFFHSELILQPR 67

Query: 70  PPFQGSSYHQPILESRKSHLQVTDNIDMGSRDTVMHRTNCVDDSNIDTSLHL 121
           PP QGS + +  +++R+  L+     ++  RD V+H T+  +DS++DTSLHL
Sbjct: 68  PPLQGSVHRESSMQNRRQVLETPILSNLQQRDMVLH-TSTFNDSDVDTSLHL 118

The following BLAST results are available for this feature:

BLAST of MC11g1030 vs.


Match Name	E-value	Identity	Description

BLAST of MC11g1030 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8645981.1	9.33e-67	87.90	hypothetical protein Csa_015491 [Cucumis sativus]	[more]
KAA0048723.1	3.64e-64	85.48	hypothetical protein E6C27_scaffold43G00160 [Cucumis melo var. makuwa] >TYK07906...	[more]
KAG6607761.1	1.91e-51	78.95	hypothetical protein SDJN03_01103, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAF3950464.1	7.90e-31	54.03	hypothetical protein CMV_023789 [Castanea mollissima]	[more]
XP_025015545.1	3.20e-30	51.61	uncharacterized protein LOC112536879 [Ricinus communis] >EEF29345.1 conserved hy...	[more]

BLAST of MC11g1030 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LBC7	4.52e-67	87.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G769680 PE=4 SV=1	[more]
A0A5D3CC18	1.76e-64	85.48	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
B9T468	1.55e-30	51.61	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0423940 PE=4 SV=1	[more]
A0A067L442	2.06e-28	50.00	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_01002 PE=4 SV=1	[more]
A0A7J9FDZ1	6.57e-26	50.89	Uncharacterized protein OS=Gossypium trilobum OX=34281 GN=Gotri_001224 PE=4 SV=1	[more]

BLAST of MC11g1030 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 8..35
None	No IPR available	PANTHER	PTHR34570:SF2	OS03G0593100 PROTEIN	coord: 1..121
None	No IPR available	PANTHER	PTHR34570	OS03G0593100 PROTEIN	coord: 1..121

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC11g1030.1	MC11g1030.1	mRNA