Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: utr5polypeptideCDSutr3
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGGTAGAAAAAAAACTTAATCAATTGAAAGTAAGCTCAAACTATTGAAATCAATTTGCTTTTTATCTCAATTATTTTTTCTTTATTATTATATATATTTTATAATTTGGTTTGTAAATTTGTAGTGCTGTATTTAATTGGTCCTAAATTTTCAAAAAAATGTCTTATAAATTATTAAATTTTCAACGTATTGTCTTATAGATTTTAAAACATGTTTAGTAAAAGTTTTTAAAGCTCGTTATGTATATATGTAATTTTTTTTGGTAAAAATCTCTTATCTTATTTCTTCTTCTTCTTCTTCTTCTTCTTTTTTTTTTTTTGACCTTTTAATTTTGGGCATAATTTCATAAGGTTATCCAAACGTACACCGAGATCGGAAACACCGCAAAATGCCGTAGCAAACAGTTTCTCTATCTCTCACTCTCCGCCGGATAAAATTCCGATTTCATTTCACAATGAATTGCATCACCTCCTCCGTTCAATTTCCTCTTCTCCGATTGCATCTCAAGCCAAATCGGCGGCCGCAGCAGCAGCAGAACTCGCCGTCTCACTCGCCGATTCTCCATCTCTTCCGCCAGATTTACATTTCTCCACAGACGCAACGATTCGCTTCACTGAAAGGCAACGCAATTCCTCCGAGCTCTCTAGTTCTCGCATCCAGCACTATTCCTCCGTCGCAGTCCGGCGACGCATCGGTCCTCCTCCCGACAGGGTTTGCCACTTCTCTCCTTCTTTAGATTCCAAATTACGCGGAAATCTGAGGCAATCTGAGGTTAATTTCTTCATCTCGTTTGTTATTTCGGCAAATTACGCAGCGGCGTGCTTCTAATTGCGTATTTCATAGCTAATTTCATCGTGCCGGAGTTGATTATGAAATCGTACCGATCCGATGAGAGCGAAGAAAATGCTCGCGCGGAAGACGGAGAATCGGGCGCGAGTGAGGGGGAAAGCCGAGCCGGATCGTTCGGGAGGAAGAAACAGGGCTTTGGCGGCAACAAGAGATGACGGAACTTGAAGGCGAAGCCATGGAATTGTTTTGAATTGAATTCTGTAAGTAAATCTCAATCTTCTTTAACCTCTTTAGGTACTTTCTGTATCGAGAATTCAGAATTGTGGTGCAGAGGATAGGGAATTGGGGATCAGATTCTGTTCTTTCTTTTGTCATTGGATTGAAAACAAGATTACTGTTTGTTAGTTTGAAAAAATCGTAAGATTATTTATGAAAAATCGAATCTGGTAATTAATGGATTTTTTTTCATGATTTTTATAGATATTTATAAGGTTA
mRNA sequence
TTGGTAGAAAAAAAACTTAATCAATTGAAAGTAAGCTCAAACTATTGAAATCAATTTGCTTTTTATCTCAATTATTTTTTCTTTATTATTATATATATTTTATAATTTGGTTTGTAAATTTGTAGTGCTGTATTTAATTGGTCCTAAATTTTCAAAAAAATGTCTTATAAATTATTAAATTTTCAACGTATTGTCTTATAGATTTTAAAACATGTTTAGTAAAAGTTTTTAAAGCTCGTTATGTATATATGTAATTTTTTTTGGTAAAAATCTCTTATCTTATTTCTTCTTCTTCTTCTTCTTCTTCTTTTTTTTTTTTTGACCTTTTAATTTTGGGCATAATTTCATAAGGTTATCCAAACGTACACCGAGATCGGAAACACCGCAAAATGCCGTAGCAAACAGTTTCTCTATCTCTCACTCTCCGCCGGATAAAATTCCGATTTCATTTCACAATGAATTGCATCACCTCCTCCGTTCAATTTCCTCTTCTCCGATTGCATCTCAAGCCAAATCGGCGGCCGCAGCAGCAGCAGAACTCGCCGTCTCACTCGCCGATTCTCCATCTCTTCCGCCAGATTTACATTTCTCCACAGACGCAACGATTCGCTTCACTGAAAGGCAACGCAATTCCTCCGAGCTCTCTAGTTCTCGCATCCAGCACTATTCCTCCGTCGCAGTCCGGCGACGCATCGGTCCTCCTCCCGACAGGCGGCGTGCTTCTAATTGCGTATTTCATAGCTAATTTCATCGTGCCGGAGTTGATTATGAAATCGTACCGATCCGATGAGAGCGAAGAAAATGCTCGCGCGGAAGACGGAGAATCGGGCGCGAGTGAGGGGGAAAGCCGAGCCGGATCGTTCGGGAGGAAGAAACAGGGCTTTGGCGGCAACAAGAGATGACGGAACTTGAAGGCGAAGCCATGGAATTGTTTTGAATTGAATTCTGTAAGTAAATCTCAATCTTCTTTAACCTCTTTAGGTACTTTCTGTATCGAGAATTCAGAATTGTGGTGCAGAGGATAGGGAATTGGGGATCAGATTCTGTTCTTTCTTTTGTCATTGGATTGAAAACAAGATTACTGTTTGTTAGTTTGAAAAAATCGTAAGATTATTTATGAAAAATCGAATCTGGTAATTAATGGATTTTTTTTCATGATTTTTATAGATATTTATAAGGTTA
Coding sequence (CDS)
ATGAATTGCATCACCTCCTCCGTTCAATTTCCTCTTCTCCGATTGCATCTCAAGCCAAATCGGCGGCCGCAGCAGCAGCAGAACTCGCCGTCTCACTCGCCGATTCTCCATCTCTTCCGCCAGATTTACATTTCTCCACAGACGCAACGATTCGCTTCACTGAAAGGCAACGCAATTCCTCCGAGCTCTCTAGTTCTCGCATCCAGCACTATTCCTCCGTCGCAGTCCGGCGACGCATCGGTCCTCCTCCCGACAGGCGGCGTGCTTCTAATTGCGTATTTCATAGCTAATTTCATCGTGCCGGAGTTGATTATGAAATCGTACCGATCCGATGAGAGCGAAGAAAATGCTCGCGCGGAAGACGGAGAATCGGGCGCGAGTGAGGGGGAAAGCCGAGCCGGATCGTTCGGGAGGAAGAAACAGGGCTTTGGCGGCAACAAGAGATGA
Protein sequence
MNCITSSVQFPLLRLHLKPNRRPQQQQNSPSHSPILHLFRQIYISPQTQRFASLKGNAIPPSSLVLASSTIPPSQSGDASVLLPTGGVLLIAYFIANFIVPELIMKSYRSDESEENARAEDGESGASEGESRAGSFGRKKQGFGGNKR
Homology
BLAST of MC11g0990 vs. NCBI nr
Match:
XP_038897194.1 (uncharacterized protein LOC120085329 [Benincasa hispida])
HSP 1 Score: 169 bits (429), Expect = 3.28e-51
Identity = 103/148 (69.59%), Postives = 112/148 (75.68%), Query Frame = 0
Query: 1 MNCITSSVQFPLLRLHLKPNRRPQQQQNSPSHSPILHLFRQIYISPQTQRFASLKGNAIP 60
MNCI+SS++FP LR HLKPNRR Q QQNSP LH+FR IYISPQT RF SLK NAIP
Sbjct: 1 MNCISSSIEFPPLRSHLKPNRR-QPQQNSPPKKN-LHIFRHIYISPQTYRFDSLKVNAIP 60
Query: 61 PSSLVLASSTIPPSQSGDASVLLPTGGVLLIAYFIANFIVPELIMKSYRSDESEENARAE 120
SSL+L +STIPPSQSGD SVLL TGGVLLIAY IANFI+PE IMKSYRSDES+ A AE
Sbjct: 61 -SSLILGNSTIPPSQSGDVSVLLQTGGVLLIAYLIANFILPEFIMKSYRSDESDGKAAAE 120
Query: 121 DGESGASEGESRAGSFGRKKQGFGGNKR 148
D ES S GRKKQGF G +R
Sbjct: 121 DEES----------SEGRKKQGFSGRRR 135
BLAST of MC11g0990 vs. NCBI nr
Match:
XP_023525256.1 (uncharacterized protein LOC111788910 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 163 bits (412), Expect = 1.96e-48
Identity = 98/148 (66.22%), Postives = 109/148 (73.65%), Query Frame = 0
Query: 1 MNCITSSVQFPLLRLHLKPNRRPQQQQNSPSHSPILHLFRQIYISPQTQRFASLKGNAIP 60
MNCITS+++ P+LR HLKPNRR +QQ NS S ++YISPQ+ RFASL NAIP
Sbjct: 18 MNCITSAIELPILRSHLKPNRRQRQQNNSQSQP-------RMYISPQSNRFASLTANAIP 77
Query: 61 PSSLVLASSTIPPSQSGDASVLLPTGGVLLIAYFIANFIVPELIMKSYRSDESEENARAE 120
+SLVLA+STIPPSQSGD SVLL T GVLLI YFIANFIVPE IMKSY +DESE A E
Sbjct: 78 -NSLVLANSTIPPSQSGDVSVLLQTSGVLLIVYFIANFIVPEFIMKSYSTDESEGKALME 137
Query: 121 DGESGASEGESRAGSFGRKKQGFGGNKR 148
D E GASE RKKQGFGGNKR
Sbjct: 138 DEEKGASER--------RKKQGFGGNKR 149
BLAST of MC11g0990 vs. NCBI nr
Match:
XP_022940449.1 (uncharacterized protein LOC111446047 [Cucurbita moschata] >KAG7037370.1 hypothetical protein SDJN02_00995 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 159 bits (401), Expect = 9.19e-47
Identity = 96/148 (64.86%), Postives = 107/148 (72.30%), Query Frame = 0
Query: 1 MNCITSSVQFPLLRLHLKPNRRPQQQQNSPSHSPILHLFRQIYISPQTQRFASLKGNAIP 60
MNCITS+++ P+LR H KPNRR ++Q NS S +IYISPQ+ RFASL NAIP
Sbjct: 18 MNCITSAIELPVLRSHFKPNRRQRKQNNSQSQP-------RIYISPQSNRFASLTANAIP 77
Query: 61 PSSLVLASSTIPPSQSGDASVLLPTGGVLLIAYFIANFIVPELIMKSYRSDESEENARAE 120
+SLVLA+STIPPSQSGD SVLL T GVLLI Y IANFIVPE IMKSY +DESE A E
Sbjct: 78 -NSLVLANSTIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTDESEGKALME 137
Query: 121 DGESGASEGESRAGSFGRKKQGFGGNKR 148
D E GASE RKKQGFGGNKR
Sbjct: 138 DDEKGASER--------RKKQGFGGNKR 149
BLAST of MC11g0990 vs. NCBI nr
Match:
XP_022981640.1 (uncharacterized protein LOC111480699 [Cucurbita maxima])
HSP 1 Score: 154 bits (389), Expect = 7.82e-45
Identity = 96/148 (64.86%), Postives = 106/148 (71.62%), Query Frame = 0
Query: 1 MNCITSSVQFPLLRLHLKPNRRPQQQQNSPSHSPILHLFRQIYISPQTQRFASLKGNAIP 60
MNCITS+++ P+LR H KPNRR ++Q NS S PI YISPQ+ RFASL NAIP
Sbjct: 27 MNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPPI-------YISPQSNRFASLTANAIP 86
Query: 61 PSSLVLASSTIPPSQSGDASVLLPTGGVLLIAYFIANFIVPELIMKSYRSDESEENARAE 120
+SLVLA+ TIPPSQSGD SVLL T GVLLI Y IANFIVPE IMKSY +DESE A E
Sbjct: 87 -NSLVLAN-TIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTDESEGKALME 146
Query: 121 DGESGASEGESRAGSFGRKKQGFGGNKR 148
D E GASE RKKQGFGGNKR
Sbjct: 147 DEEIGASER--------RKKQGFGGNKR 157
BLAST of MC11g0990 vs. NCBI nr
Match:
KAG6585878.1 (hypothetical protein SDJN03_18611, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 154 bits (388), Expect = 1.65e-44
Identity = 93/145 (64.14%), Postives = 104/145 (71.72%), Query Frame = 0
Query: 1 MNCITSSVQFPLLRLHLKPNRRPQQQQNSPSHSPILHLFRQIYISPQTQRFASLKGNAIP 60
MNCITS+++ P+LR H KPNRR ++Q NS S +IYISPQ+ RFASL NAIP
Sbjct: 18 MNCITSAIELPVLRSHFKPNRRQRKQNNSQSQP-------RIYISPQSNRFASLTANAIP 77
Query: 61 PSSLVLASSTIPPSQSGDASVLLPTGGVLLIAYFIANFIVPELIMKSYRSDESEENARAE 120
+SLVLA+STIPPSQSGD SVLL T GVLLI Y IANFIVPE IMKSY +DESE A E
Sbjct: 78 -NSLVLANSTIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTDESEGKALME 137
Query: 121 DGESGASEGESRAGSFGRKKQGFGG 145
D E GASE RKKQGFGG
Sbjct: 138 DDEKGASER--------RKKQGFGG 146
BLAST of MC11g0990 vs. ExPASy TrEMBL
Match:
A0A6J1FK57 (uncharacterized protein LOC111446047 OS=Cucurbita moschata OX=3662 GN=LOC111446047 PE=4 SV=1)
HSP 1 Score: 159 bits (401), Expect = 4.45e-47
Identity = 96/148 (64.86%), Postives = 107/148 (72.30%), Query Frame = 0
Query: 1 MNCITSSVQFPLLRLHLKPNRRPQQQQNSPSHSPILHLFRQIYISPQTQRFASLKGNAIP 60
MNCITS+++ P+LR H KPNRR ++Q NS S +IYISPQ+ RFASL NAIP
Sbjct: 18 MNCITSAIELPVLRSHFKPNRRQRKQNNSQSQP-------RIYISPQSNRFASLTANAIP 77
Query: 61 PSSLVLASSTIPPSQSGDASVLLPTGGVLLIAYFIANFIVPELIMKSYRSDESEENARAE 120
+SLVLA+STIPPSQSGD SVLL T GVLLI Y IANFIVPE IMKSY +DESE A E
Sbjct: 78 -NSLVLANSTIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTDESEGKALME 137
Query: 121 DGESGASEGESRAGSFGRKKQGFGGNKR 148
D E GASE RKKQGFGGNKR
Sbjct: 138 DDEKGASER--------RKKQGFGGNKR 149
BLAST of MC11g0990 vs. ExPASy TrEMBL
Match:
A0A6J1J030 (uncharacterized protein LOC111480699 OS=Cucurbita maxima OX=3661 GN=LOC111480699 PE=4 SV=1)
HSP 1 Score: 154 bits (389), Expect = 3.79e-45
Identity = 96/148 (64.86%), Postives = 106/148 (71.62%), Query Frame = 0
Query: 1 MNCITSSVQFPLLRLHLKPNRRPQQQQNSPSHSPILHLFRQIYISPQTQRFASLKGNAIP 60
MNCITS+++ P+LR H KPNRR ++Q NS S PI YISPQ+ RFASL NAIP
Sbjct: 27 MNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPPI-------YISPQSNRFASLTANAIP 86
Query: 61 PSSLVLASSTIPPSQSGDASVLLPTGGVLLIAYFIANFIVPELIMKSYRSDESEENARAE 120
+SLVLA+ TIPPSQSGD SVLL T GVLLI Y IANFIVPE IMKSY +DESE A E
Sbjct: 87 -NSLVLAN-TIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTDESEGKALME 146
Query: 121 DGESGASEGESRAGSFGRKKQGFGGNKR 148
D E GASE RKKQGFGGNKR
Sbjct: 147 DEEIGASER--------RKKQGFGGNKR 157
BLAST of MC11g0990 vs. ExPASy TrEMBL
Match:
A0A0A0K9M2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G420170 PE=4 SV=1)
HSP 1 Score: 119 bits (299), Expect = 4.41e-32
Identity = 68/113 (60.18%), Postives = 83/113 (73.45%), Query Frame = 0
Query: 1 MNCITSSVQFPLLRLHLKPNRRPQQQQNSPSHSPILHLFRQIYISPQ-TQRFASLKGNAI 60
MN I SS+QF LL P+ P+Q Q++ LH+F QIY+ PQ T RF+S+K N+I
Sbjct: 1 MNSIFSSIQFRLL-----PSPNPRQPQHN------LHIFHQIYLPPQITHRFSSIKTNSI 60
Query: 61 PPSSLVLASSTIPPSQSGDASVLLPTGGVLLIAYFIANFIVPELIMKSYRSDE 112
P+SL+L +STIPPSQSGD SVLLP GVLLIAY +ANFI PE IMKSYRSD+
Sbjct: 61 LPTSLILGNSTIPPSQSGDISVLLPISGVLLIAYLLANFIFPEFIMKSYRSDD 102
BLAST of MC11g0990 vs. ExPASy TrEMBL
Match:
A0A5D3BI04 (Glutathione transport system permease gsiD OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold27427G00010 PE=4 SV=1)
HSP 1 Score: 112 bits (280), Expect = 3.44e-29
Identity = 68/117 (58.12%), Postives = 83/117 (70.94%), Query Frame = 0
Query: 1 MNCITSSVQFPLLRLHLKPNRRPQQQQNSPSHSPILHLFRQIYISPQTQ-RFASLKGNAI 60
MN I SS++F LL P+ P Q Q++ LH+F QI++SPQT RF S+K N+I
Sbjct: 1 MNSIFSSIEFRLL-----PSPNPPQPQHN------LHIFHQIHLSPQTTYRFNSIKTNSI 60
Query: 61 -PPSSLVLASSTIPPSQSGDASVLLPTGGVLLIAYFIANFIVPELIMKSYRSDESEE 115
P +SL+L +STIPP+QSGD SVLL T GVLLIAY IANFI PE IMKSYRSD+ E
Sbjct: 61 LPTNSLILGNSTIPPAQSGDISVLLQTSGVLLIAYLIANFIFPEFIMKSYRSDDESE 106
BLAST of MC11g0990 vs. ExPASy TrEMBL
Match:
B9SV97 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1303160 PE=4 SV=1)
HSP 1 Score: 68.2 bits (165), Expect = 1.00e-11
Identity = 39/72 (54.17%), Postives = 51/72 (70.83%), Query Frame = 0
Query: 49 QRFASLKGNAIPPSSLVLASSTIPPSQSGDASVLLPTGGVLLIAYFIANFIVPELIMKSY 108
QR S++ NA+P + L+LA ST P+Q GD SVLLPTGG+LL Y IANF+VP I KS+
Sbjct: 39 QRVLSVRTNAVP-NPLILAESTS-PAQGGDISVLLPTGGLLLFVYGIANFVVPFFISKSF 98
Query: 109 RSDESEENARAE 120
SD+ E++ E
Sbjct: 99 ESDKETEDSGPE 108
BLAST of MC11g0990 vs. TAIR 10
Match:
AT1G50732.1 (unknown protein. )
HSP 1 Score: 47.0 bits (110), Expect = 1.5e-05
Identity = 20/48 (41.67%), Postives = 31/48 (64.58%), Query Frame = 0
Query: 68 SSTIPPSQSGDASVLLPTGGVLLIAYFIANFIVPELIMKSYRSDESEE 116
+S +PPS+SGD + L G ++ Y + NF+VP L+ KS + +E EE
Sbjct: 66 ASVLPPSESGDITTFLFVSGAMISMYLVTNFLVPSLLFKSLQGEEEEE 113
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_038897194.1 | 3.28e-51 | 69.59 | uncharacterized protein LOC120085329 [Benincasa hispida] | [more] |
XP_023525256.1 | 1.96e-48 | 66.22 | uncharacterized protein LOC111788910 [Cucurbita pepo subsp. pepo] | [more] |
XP_022940449.1 | 9.19e-47 | 64.86 | uncharacterized protein LOC111446047 [Cucurbita moschata] >KAG7037370.1 hypothet... | [more] |
XP_022981640.1 | 7.82e-45 | 64.86 | uncharacterized protein LOC111480699 [Cucurbita maxima] | [more] |
KAG6585878.1 | 1.65e-44 | 64.14 | hypothetical protein SDJN03_18611, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1FK57 | 4.45e-47 | 64.86 | uncharacterized protein LOC111446047 OS=Cucurbita moschata OX=3662 GN=LOC1114460... | [more] |
A0A6J1J030 | 3.79e-45 | 64.86 | uncharacterized protein LOC111480699 OS=Cucurbita maxima OX=3661 GN=LOC111480699... | [more] |
A0A0A0K9M2 | 4.41e-32 | 60.18 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G420170 PE=4 SV=1 | [more] |
A0A5D3BI04 | 3.44e-29 | 58.12 | Glutathione transport system permease gsiD OS=Cucumis melo var. makuwa OX=119469... | [more] |
B9SV97 | 1.00e-11 | 54.17 | Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1303160 PE=4 SV=1 | [more] |