MC11g0900 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC11g0900
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC11: 7655839 .. 7655987 (-)
RNA-Seq Expression	MC11g0900
Synteny	MC11g0900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGGCATCCCACACGAAGCTTGGGGGTCGCATTCTCGGTTATTATCTGCTTGATGTTCAACTTCATTATCTCATATTTTCTCCTGTCATGGCTGCTACAAACCAACCAAATCCAAGGATCAAGAAATCACCAGGTTTTTAAGAATTCT

mRNA sequence

ATTGGCATCCCACACGAAGCTTGGGGGTCGCATTCTGTTATTATCTGCTTGATGTTCAACTTCATTATCTCATATTTTCTCCTGTCATGGCTGCTACAAACCAACCAAATCCAAGGATCAAGAAATCACCAGGTTTTTAAGAATTCT

Coding sequence (CDS)

ATTGGCATCCCACACGAAGCTTGGGGGTCGCATTCTGTTATTATCTGCTTGATGTTCAACTTCATTATCTCATATTTTCTCCTGTCATGGCTGCTACAAACCAACCAAATCCAAGGATCAAGAAATCACCAGGTTTTTAAGAATTCT

Protein sequence

IGIPHEAWGSHSVIICLMFNFIISYFLLSWLLQTNQIQGSRNHQVFKNS

Homology

[Close]

BLAST of MC11g0900 vs. NCBI nr
Match: KAG7024606.1 (hypothetical protein SDJN02_13424 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 61.2 bits (147), Expect = 1.25e-09
Identity = 32/50 (64.00%), Postives = 35/50 (70.00%), Query Frame = 0


Query: 1   IGIPHEAWGSHS-VIICLMFNFIISYFLLSWLLQTNQIQGSRNHQVFKNS 49
           IGIPHEAWG    VIICL+  FII  FL SWLL+TNQ QG  NH   K+S
Sbjct: 156 IGIPHEAWGVGGLVIICLILAFIIPSFLPSWLLRTNQTQGPGNHHASKSS 205

[Close]

BLAST of MC11g0900 vs. NCBI nr
Match: XP_022975678.1 (uncharacterized protein LOC111475555 [Cucurbita maxima] >XP_022975681.1 uncharacterized protein LOC111475555 [Cucurbita maxima])

HSP 1 Score: 61.2 bits (147), Expect = 1.25e-09
Identity = 32/50 (64.00%), Postives = 35/50 (70.00%), Query Frame = 0


Query: 1   IGIPHEAWGSHS-VIICLMFNFIISYFLLSWLLQTNQIQGSRNHQVFKNS 49
           IGIPHEAWG    VIICL+  FII  FL SWLL+TNQ QG  NH   K+S
Sbjct: 156 IGIPHEAWGVGGLVIICLILAFIIPSFLPSWLLRTNQTQGPGNHHASKSS 205

[Close]

BLAST of MC11g0900 vs. NCBI nr
Match: XP_022936341.1 (uncharacterized protein LOC111442991 [Cucurbita moschata] >XP_022936343.1 uncharacterized protein LOC111442991 [Cucurbita moschata])

HSP 1 Score: 60.5 bits (145), Expect = 2.46e-09
Identity = 31/50 (62.00%), Postives = 35/50 (70.00%), Query Frame = 0


Query: 1   IGIPHEAWGSHS-VIICLMFNFIISYFLLSWLLQTNQIQGSRNHQVFKNS 49
           IGIPHEAWG    VIICL+  FI+  FL SWLL+TNQ QG  NH   K+S
Sbjct: 156 IGIPHEAWGVGGLVIICLILAFILPSFLPSWLLRTNQTQGPGNHHASKSS 205

[Close]

BLAST of MC11g0900 vs. NCBI nr
Match: KAG6591724.1 (hypothetical protein SDJN03_14070, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 61.2 bits (147), Expect = 2.62e-09
Identity = 32/50 (64.00%), Postives = 35/50 (70.00%), Query Frame = 0


Query: 1   IGIPHEAWGSHS-VIICLMFNFIISYFLLSWLLQTNQIQGSRNHQVFKNS 49
           IGIPHEAWG    VIICL+  FII  FL SWLL+TNQ QG  NH   K+S
Sbjct: 240 IGIPHEAWGVGGLVIICLILAFIIPSFLPSWLLRTNQTQGPGNHHASKSS 289

[Close]

BLAST of MC11g0900 vs. NCBI nr
Match: XP_022134867.1 (uncharacterized protein LOC111006945 isoform X2 [Momordica charantia])

HSP 1 Score: 57.8 bits (138), Expect = 1.24e-08
Identity = 30/50 (60.00%), Postives = 36/50 (72.00%), Query Frame = 0


Query: 1   IGIPHEAWG-SHSVIICLMFNFIISYFLLSWLLQTNQIQGSRNHQVFKNS 49
           +GIPH+AWG +  VIICL+ +FII   L SWLL+ NQ QGS NH   KNS
Sbjct: 106 VGIPHKAWGVAILVIICLILSFIIPSRLPSWLLKANQTQGSVNHHSSKNS 155

[Close]

BLAST of MC11g0900 vs. ExPASy TrEMBL
Match: A0A6J1IJY5 (uncharacterized protein LOC111475555 OS=Cucurbita maxima OX=3661 GN=LOC111475555 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 6.07e-10
Identity = 32/50 (64.00%), Postives = 35/50 (70.00%), Query Frame = 0


Query: 1   IGIPHEAWGSHS-VIICLMFNFIISYFLLSWLLQTNQIQGSRNHQVFKNS 49
           IGIPHEAWG    VIICL+  FII  FL SWLL+TNQ QG  NH   K+S
Sbjct: 156 IGIPHEAWGVGGLVIICLILAFIIPSFLPSWLLRTNQTQGPGNHHASKSS 205

[Close]

BLAST of MC11g0900 vs. ExPASy TrEMBL
Match: A0A6J1F779 (uncharacterized protein LOC111442991 OS=Cucurbita moschata OX=3662 GN=LOC111442991 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.19e-09
Identity = 31/50 (62.00%), Postives = 35/50 (70.00%), Query Frame = 0


Query: 1   IGIPHEAWGSHS-VIICLMFNFIISYFLLSWLLQTNQIQGSRNHQVFKNS 49
           IGIPHEAWG    VIICL+  FI+  FL SWLL+TNQ QG  NH   K+S
Sbjct: 156 IGIPHEAWGVGGLVIICLILAFILPSFLPSWLLRTNQTQGPGNHHASKSS 205

[Close]

BLAST of MC11g0900 vs. ExPASy TrEMBL
Match: A0A6J1C0U7 (uncharacterized protein LOC111006945 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111006945 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 6.00e-09
Identity = 30/50 (60.00%), Postives = 36/50 (72.00%), Query Frame = 0


Query: 1   IGIPHEAWG-SHSVIICLMFNFIISYFLLSWLLQTNQIQGSRNHQVFKNS 49
           +GIPH+AWG +  VIICL+ +FII   L SWLL+ NQ QGS NH   KNS
Sbjct: 106 VGIPHKAWGVAILVIICLILSFIIPSRLPSWLLKANQTQGSVNHHSSKNS 155

[Close]

BLAST of MC11g0900 vs. ExPASy TrEMBL
Match: A0A6J1BYR8 (uncharacterized protein LOC111006945 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111006945 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.24e-08
Identity = 30/50 (60.00%), Postives = 36/50 (72.00%), Query Frame = 0


Query: 1   IGIPHEAWG-SHSVIICLMFNFIISYFLLSWLLQTNQIQGSRNHQVFKNS 49
           +GIPH+AWG +  VIICL+ +FII   L SWLL+ NQ QGS NH   KNS
Sbjct: 156 VGIPHKAWGVAILVIICLILSFIIPSRLPSWLLKANQTQGSVNHHSSKNS 205

The following BLAST results are available for this feature:

BLAST of MC11g0900 vs.


Match Name	E-value	Identity	Description

BLAST of MC11g0900 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7024606.1	1.25e-09	64.00	hypothetical protein SDJN02_13424 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022975678.1	1.25e-09	64.00	uncharacterized protein LOC111475555 [Cucurbita maxima] >XP_022975681.1 uncharac...	[more]
XP_022936341.1	2.46e-09	62.00	uncharacterized protein LOC111442991 [Cucurbita moschata] >XP_022936343.1 unchar...	[more]
KAG6591724.1	2.62e-09	64.00	hypothetical protein SDJN03_14070, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022134867.1	1.24e-08	60.00	uncharacterized protein LOC111006945 isoform X2 [Momordica charantia]	[more]

BLAST of MC11g0900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IJY5	6.07e-10	64.00	uncharacterized protein LOC111475555 OS=Cucurbita maxima OX=3661 GN=LOC111475555...	[more]
A0A6J1F779	1.19e-09	62.00	uncharacterized protein LOC111442991 OS=Cucurbita moschata OX=3662 GN=LOC1114429...	[more]
A0A6J1C0U7	6.00e-09	60.00	uncharacterized protein LOC111006945 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1BYR8	1.24e-08	60.00	uncharacterized protein LOC111006945 isoform X1 OS=Momordica charantia OX=3673 G...	[more]

BLAST of MC11g0900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC11g0900.1	MC11g0900.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane