Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGTGAAGATGCAGACTACTTGCACCAGGACAAAAAGAGCTTATGAAGCTTCACTATTCCCTAAGATTGGCTTTGGACCTTTCCTGCACAGCTTAGGTGGAGGGCAAAGAAGGCCCCTTTTCGGAAAGCTCGAACCATCAGCACAG
mRNA sequence
ATGTTTGTGAAGATGCAGACTACTTGCACCAGGACAAAAAGAGCTTATGAAGCTTCACTATTCCCTAAGATTGGCTTTGGACCTTTCCTGCACAGCTTAGGTGGAGGGCAAAGAAGGCCCCTTTTCGGAAAGCTCGAACCATCAGCACAG
Coding sequence (CDS)
ATGTTTGTGAAGATGCAGACTACTTGCACCAGGACAAAAAGAGCTTATGAAGCTTCACTATTCCCTAAGATTGGCTTTGGACCTTTCCTGCACAGCTTAGGTGGAGGGCAAAGAAGGCCCCTTTTCGGAAAGCTCGAACCATCAGCACAG
Protein sequence
MFVKMQTTCTRTKRAYEASLFPKIGFGPFLHSLGGGQRRPLFGKLEPSAQ
Homology
BLAST of MC11g0548 vs. NCBI nr
Match:
KAB2097075.1 (hypothetical protein ES319_A01G146600v1 [Gossypium barbadense] >KAG4214788.1 hypothetical protein ERO13_A01G139755v2 [Gossypium hirsutum])
HSP 1 Score: 69.7 bits (169), Expect = 4.86e-14
Identity = 34/50 (68.00%), Postives = 39/50 (78.00%), Query Frame = 0
Query: 1 MFVKMQTTCTRTKRAYEASLFPKIGFGPFLHSLGGGQRRPLFGKLEPSAQ 50
M +KM+TTCT T+R YEASLFP IGFG FL SLGG +RRP G LEPS +
Sbjct: 1 MSMKMRTTCTWTERPYEASLFPGIGFGIFLRSLGGRRRRPPSGGLEPSVR 50
BLAST of MC11g0548 vs. NCBI nr
Match:
VAI84430.1 (unnamed protein product [Triticum turgidum subsp. durum])
HSP 1 Score: 68.9 bits (167), Expect = 9.79e-14
Identity = 33/43 (76.74%), Postives = 35/43 (81.40%), Query Frame = 0
Query: 1 MFVKMQTTCTRTKRAYEASLFPKIGFGPFLHSLGGGQRRPLFG 43
M VKMQTTCT T+R YEA LFP IGFGPFL SLGG +RRP FG
Sbjct: 1 MSVKMQTTCTWTERPYEALLFPGIGFGPFLRSLGGRRRRPPFG 43
BLAST of MC11g0548 vs. NCBI nr
Match:
KAF7100381.1 (hypothetical protein CFC21_101906 [Triticum aestivum])
HSP 1 Score: 68.9 bits (167), Expect = 9.79e-14
Identity = 33/43 (76.74%), Postives = 35/43 (81.40%), Query Frame = 0
Query: 1 MFVKMQTTCTRTKRAYEASLFPKIGFGPFLHSLGGGQRRPLFG 43
M VKMQTTCT T+R YEA LFP IGFGPFL SLGG +RRP FG
Sbjct: 1 MSVKMQTTCTWTERPYEALLFPGIGFGPFLRSLGGRRRRPPFG 43
BLAST of MC11g0548 vs. NCBI nr
Match:
TKY50927.1 (hypothetical protein E2542_SST22434 [Spatholobus suberectus])
HSP 1 Score: 70.5 bits (171), Expect = 2.65e-13
Identity = 35/49 (71.43%), Postives = 38/49 (77.55%), Query Frame = 0
Query: 1 MFVKMQTTCTRTKRAYEASLFPKIGFGPFLHSLGGGQRRPLFGKLEPSA 49
MFVKM+TTCT T+R YEASLFP IGFG FL SLGGG+ L G EPSA
Sbjct: 81 MFVKMRTTCTWTERPYEASLFPGIGFGLFLRSLGGGKEGLLLGGPEPSA 129
BLAST of MC11g0548 vs. NCBI nr
Match:
TYJ49668.1 (hypothetical protein E1A91_A01G150900v1 [Gossypium mustelinum])
HSP 1 Score: 67.8 bits (164), Expect = 2.81e-13
Identity = 33/50 (66.00%), Postives = 38/50 (76.00%), Query Frame = 0
Query: 1 MFVKMQTTCTRTKRAYEASLFPKIGFGPFLHSLGGGQRRPLFGKLEPSAQ 50
M +K +TTCT T+R YEASLFP IGFG FL SLGG +RRP G LEPS +
Sbjct: 1 MSMKTRTTCTWTERPYEASLFPGIGFGLFLRSLGGRRRRPSSGGLEPSVR 50
BLAST of MC11g0548 vs. ExPASy TrEMBL
Match:
A0A5J5WYI3 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A01G146600v1 PE=4 SV=1)
HSP 1 Score: 69.7 bits (169), Expect = 2.35e-14
Identity = 34/50 (68.00%), Postives = 39/50 (78.00%), Query Frame = 0
Query: 1 MFVKMQTTCTRTKRAYEASLFPKIGFGPFLHSLGGGQRRPLFGKLEPSAQ 50
M +KM+TTCT T+R YEASLFP IGFG FL SLGG +RRP G LEPS +
Sbjct: 1 MSMKMRTTCTWTERPYEASLFPGIGFGIFLRSLGGRRRRPPSGGLEPSVR 50
BLAST of MC11g0548 vs. ExPASy TrEMBL
Match:
A0A446Y7D3 (Uncharacterized protein OS=Triticum turgidum subsp. durum OX=4567 GN=TRITD_7Bv1G038040 PE=4 SV=1)
HSP 1 Score: 68.9 bits (167), Expect = 4.74e-14
Identity = 33/43 (76.74%), Postives = 35/43 (81.40%), Query Frame = 0
Query: 1 MFVKMQTTCTRTKRAYEASLFPKIGFGPFLHSLGGGQRRPLFG 43
M VKMQTTCT T+R YEA LFP IGFGPFL SLGG +RRP FG
Sbjct: 1 MSVKMQTTCTWTERPYEALLFPGIGFGPFLRSLGGRRRRPPFG 43
BLAST of MC11g0548 vs. ExPASy TrEMBL
Match:
A0A5D3AFY8 (Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_A01G150900v1 PE=4 SV=1)
HSP 1 Score: 67.8 bits (164), Expect = 1.36e-13
Identity = 33/50 (66.00%), Postives = 38/50 (76.00%), Query Frame = 0
Query: 1 MFVKMQTTCTRTKRAYEASLFPKIGFGPFLHSLGGGQRRPLFGKLEPSAQ 50
M +K +TTCT T+R YEASLFP IGFG FL SLGG +RRP G LEPS +
Sbjct: 1 MSMKTRTTCTWTERPYEASLFPGIGFGLFLRSLGGRRRRPSSGGLEPSVR 50
BLAST of MC11g0548 vs. ExPASy TrEMBL
Match:
A0A446JIE4 (Uncharacterized protein OS=Triticum turgidum subsp. durum OX=4567 GN=TRITD_1Bv1G012190 PE=4 SV=1)
HSP 1 Score: 67.4 bits (163), Expect = 1.93e-13
Identity = 31/40 (77.50%), Postives = 34/40 (85.00%), Query Frame = 0
Query: 1 MFVKMQTTCTRTKRAYEASLFPKIGFGPFLHSLGGGQRRP 40
M VKM+TTCT T+R YEA LFP IGFGPFLHSLGG +RRP
Sbjct: 1 MSVKMRTTCTWTERPYEALLFPGIGFGPFLHSLGGRRRRP 40
BLAST of MC11g0548 vs. ExPASy TrEMBL
Match:
A0A3B6PP00 (Uncharacterized protein OS=Triticum aestivum OX=4565 PE=4 SV=1)
HSP 1 Score: 67.4 bits (163), Expect = 1.93e-13
Identity = 31/40 (77.50%), Postives = 34/40 (85.00%), Query Frame = 0
Query: 1 MFVKMQTTCTRTKRAYEASLFPKIGFGPFLHSLGGGQRRP 40
M VKM+TTCTRT+R YEA LFP IGFGPFL SLGG +RRP
Sbjct: 1 MSVKMRTTCTRTERPYEALLFPGIGFGPFLRSLGGRRRRP 40
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| KAB2097075.1 | 4.86e-14 | 68.00 | hypothetical protein ES319_A01G146600v1 [Gossypium barbadense] >KAG4214788.1 hyp... | [more] |
| VAI84430.1 | 9.79e-14 | 76.74 | unnamed protein product [Triticum turgidum subsp. durum] | [more] |
| KAF7100381.1 | 9.79e-14 | 76.74 | hypothetical protein CFC21_101906 [Triticum aestivum] | [more] |
| TKY50927.1 | 2.65e-13 | 71.43 | hypothetical protein E2542_SST22434 [Spatholobus suberectus] | [more] |
| TYJ49668.1 | 2.81e-13 | 66.00 | hypothetical protein E1A91_A01G150900v1 [Gossypium mustelinum] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A5J5WYI3 | 2.35e-14 | 68.00 | Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A01G146600v1 PE... | [more] |
| A0A446Y7D3 | 4.74e-14 | 76.74 | Uncharacterized protein OS=Triticum turgidum subsp. durum OX=4567 GN=TRITD_7Bv1G... | [more] |
| A0A5D3AFY8 | 1.36e-13 | 66.00 | Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_A01G150900v1 P... | [more] |
| A0A446JIE4 | 1.93e-13 | 77.50 | Uncharacterized protein OS=Triticum turgidum subsp. durum OX=4567 GN=TRITD_1Bv1G... | [more] |
| A0A3B6PP00 | 1.93e-13 | 77.50 | Uncharacterized protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
