MC11g0548 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC11g0548
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC11: 4278466 .. 4278615 (-)
RNA-Seq Expression	MC11g0548
Synteny	MC11g0548

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTGTGAAGATGCAGACTACTTGCACCAGGACAAAAAGAGCTTATGAAGCTTCACTATTCCCTAAGATTGGCTTTGGACCTTTCCTGCACAGCTTAGGTGGAGGGCAAAGAAGGCCCCTTTTCGGAAAGCTCGAACCATCAGCACAG

mRNA sequence

ATGTTTGTGAAGATGCAGACTACTTGCACCAGGACAAAAAGAGCTTATGAAGCTTCACTATTCCCTAAGATTGGCTTTGGACCTTTCCTGCACAGCTTAGGTGGAGGGCAAAGAAGGCCCCTTTTCGGAAAGCTCGAACCATCAGCACAG

Coding sequence (CDS)

ATGTTTGTGAAGATGCAGACTACTTGCACCAGGACAAAAAGAGCTTATGAAGCTTCACTATTCCCTAAGATTGGCTTTGGACCTTTCCTGCACAGCTTAGGTGGAGGGCAAAGAAGGCCCCTTTTCGGAAAGCTCGAACCATCAGCACAG

Protein sequence

MFVKMQTTCTRTKRAYEASLFPKIGFGPFLHSLGGGQRRPLFGKLEPSAQ

Homology

[Close]

BLAST of MC11g0548 vs. NCBI nr
Match: KAB2097075.1 (hypothetical protein ES319_A01G146600v1 [Gossypium barbadense] >KAG4214788.1 hypothetical protein ERO13_A01G139755v2 [Gossypium hirsutum])

HSP 1 Score: 69.7 bits (169), Expect = 4.86e-14
Identity = 34/50 (68.00%), Postives = 39/50 (78.00%), Query Frame = 0


Query: 1  MFVKMQTTCTRTKRAYEASLFPKIGFGPFLHSLGGGQRRPLFGKLEPSAQ 50
          M +KM+TTCT T+R YEASLFP IGFG FL SLGG +RRP  G LEPS +
Sbjct: 1  MSMKMRTTCTWTERPYEASLFPGIGFGIFLRSLGGRRRRPPSGGLEPSVR 50

[Close]

BLAST of MC11g0548 vs. NCBI nr
Match: VAI84430.1 (unnamed protein product [Triticum turgidum subsp. durum])

HSP 1 Score: 68.9 bits (167), Expect = 9.79e-14
Identity = 33/43 (76.74%), Postives = 35/43 (81.40%), Query Frame = 0


Query: 1  MFVKMQTTCTRTKRAYEASLFPKIGFGPFLHSLGGGQRRPLFG 43
          M VKMQTTCT T+R YEA LFP IGFGPFL SLGG +RRP FG
Sbjct: 1  MSVKMQTTCTWTERPYEALLFPGIGFGPFLRSLGGRRRRPPFG 43

[Close]

BLAST of MC11g0548 vs. NCBI nr
Match: KAF7100381.1 (hypothetical protein CFC21_101906 [Triticum aestivum])

HSP 1 Score: 68.9 bits (167), Expect = 9.79e-14
Identity = 33/43 (76.74%), Postives = 35/43 (81.40%), Query Frame = 0


Query: 1  MFVKMQTTCTRTKRAYEASLFPKIGFGPFLHSLGGGQRRPLFG 43
          M VKMQTTCT T+R YEA LFP IGFGPFL SLGG +RRP FG
Sbjct: 1  MSVKMQTTCTWTERPYEALLFPGIGFGPFLRSLGGRRRRPPFG 43

[Close]

BLAST of MC11g0548 vs. NCBI nr
Match: TKY50927.1 (hypothetical protein E2542_SST22434 [Spatholobus suberectus])

HSP 1 Score: 70.5 bits (171), Expect = 2.65e-13
Identity = 35/49 (71.43%), Postives = 38/49 (77.55%), Query Frame = 0


Query: 1   MFVKMQTTCTRTKRAYEASLFPKIGFGPFLHSLGGGQRRPLFGKLEPSA 49
           MFVKM+TTCT T+R YEASLFP IGFG FL SLGGG+   L G  EPSA
Sbjct: 81  MFVKMRTTCTWTERPYEASLFPGIGFGLFLRSLGGGKEGLLLGGPEPSA 129

[Close]

BLAST of MC11g0548 vs. NCBI nr
Match: TYJ49668.1 (hypothetical protein E1A91_A01G150900v1 [Gossypium mustelinum])

HSP 1 Score: 67.8 bits (164), Expect = 2.81e-13
Identity = 33/50 (66.00%), Postives = 38/50 (76.00%), Query Frame = 0


Query: 1  MFVKMQTTCTRTKRAYEASLFPKIGFGPFLHSLGGGQRRPLFGKLEPSAQ 50
          M +K +TTCT T+R YEASLFP IGFG FL SLGG +RRP  G LEPS +
Sbjct: 1  MSMKTRTTCTWTERPYEASLFPGIGFGLFLRSLGGRRRRPSSGGLEPSVR 50

[Close]

BLAST of MC11g0548 vs. ExPASy TrEMBL
Match: A0A5J5WYI3 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A01G146600v1 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 2.35e-14
Identity = 34/50 (68.00%), Postives = 39/50 (78.00%), Query Frame = 0


Query: 1  MFVKMQTTCTRTKRAYEASLFPKIGFGPFLHSLGGGQRRPLFGKLEPSAQ 50
          M +KM+TTCT T+R YEASLFP IGFG FL SLGG +RRP  G LEPS +
Sbjct: 1  MSMKMRTTCTWTERPYEASLFPGIGFGIFLRSLGGRRRRPPSGGLEPSVR 50

[Close]

BLAST of MC11g0548 vs. ExPASy TrEMBL
Match: A0A446Y7D3 (Uncharacterized protein OS=Triticum turgidum subsp. durum OX=4567 GN=TRITD_7Bv1G038040 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 4.74e-14
Identity = 33/43 (76.74%), Postives = 35/43 (81.40%), Query Frame = 0


Query: 1  MFVKMQTTCTRTKRAYEASLFPKIGFGPFLHSLGGGQRRPLFG 43
          M VKMQTTCT T+R YEA LFP IGFGPFL SLGG +RRP FG
Sbjct: 1  MSVKMQTTCTWTERPYEALLFPGIGFGPFLRSLGGRRRRPPFG 43

[Close]

BLAST of MC11g0548 vs. ExPASy TrEMBL
Match: A0A5D3AFY8 (Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_A01G150900v1 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.36e-13
Identity = 33/50 (66.00%), Postives = 38/50 (76.00%), Query Frame = 0


Query: 1  MFVKMQTTCTRTKRAYEASLFPKIGFGPFLHSLGGGQRRPLFGKLEPSAQ 50
          M +K +TTCT T+R YEASLFP IGFG FL SLGG +RRP  G LEPS +
Sbjct: 1  MSMKTRTTCTWTERPYEASLFPGIGFGLFLRSLGGRRRRPSSGGLEPSVR 50

[Close]

BLAST of MC11g0548 vs. ExPASy TrEMBL
Match: A0A446JIE4 (Uncharacterized protein OS=Triticum turgidum subsp. durum OX=4567 GN=TRITD_1Bv1G012190 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.93e-13
Identity = 31/40 (77.50%), Postives = 34/40 (85.00%), Query Frame = 0


Query: 1  MFVKMQTTCTRTKRAYEASLFPKIGFGPFLHSLGGGQRRP 40
          M VKM+TTCT T+R YEA LFP IGFGPFLHSLGG +RRP
Sbjct: 1  MSVKMRTTCTWTERPYEALLFPGIGFGPFLHSLGGRRRRP 40

[Close]

BLAST of MC11g0548 vs. ExPASy TrEMBL
Match: A0A3B6PP00 (Uncharacterized protein OS=Triticum aestivum OX=4565 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.93e-13
Identity = 31/40 (77.50%), Postives = 34/40 (85.00%), Query Frame = 0


Query: 1  MFVKMQTTCTRTKRAYEASLFPKIGFGPFLHSLGGGQRRP 40
          M VKM+TTCTRT+R YEA LFP IGFGPFL SLGG +RRP
Sbjct: 1  MSVKMRTTCTRTERPYEALLFPGIGFGPFLRSLGGRRRRP 40

The following BLAST results are available for this feature:

BLAST of MC11g0548 vs.


Match Name	E-value	Identity	Description

BLAST of MC11g0548 vs. NCBI nr


Match Name	E-value	Identity	Description
KAB2097075.1	4.86e-14	68.00	hypothetical protein ES319_A01G146600v1 [Gossypium barbadense] >KAG4214788.1 hyp...	[more]
VAI84430.1	9.79e-14	76.74	unnamed protein product [Triticum turgidum subsp. durum]	[more]
KAF7100381.1	9.79e-14	76.74	hypothetical protein CFC21_101906 [Triticum aestivum]	[more]
TKY50927.1	2.65e-13	71.43	hypothetical protein E2542_SST22434 [Spatholobus suberectus]	[more]
TYJ49668.1	2.81e-13	66.00	hypothetical protein E1A91_A01G150900v1 [Gossypium mustelinum]	[more]

BLAST of MC11g0548 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5J5WYI3	2.35e-14	68.00	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A01G146600v1 PE...	[more]
A0A446Y7D3	4.74e-14	76.74	Uncharacterized protein OS=Triticum turgidum subsp. durum OX=4567 GN=TRITD_7Bv1G...	[more]
A0A5D3AFY8	1.36e-13	66.00	Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_A01G150900v1 P...	[more]
A0A446JIE4	1.93e-13	77.50	Uncharacterized protein OS=Triticum turgidum subsp. durum OX=4567 GN=TRITD_1Bv1G...	[more]
A0A3B6PP00	1.93e-13	77.50	Uncharacterized protein OS=Triticum aestivum OX=4565 PE=4 SV=1	[more]

BLAST of MC11g0548 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR48245	FAMILY NOT NAMED	coord: 1..43

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC11g0548.1	MC11g0548.1	mRNA