MC11g0365 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC11g0365
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Transmembrane protein
Location	MC11: 2837453 .. 2837782 (-)
RNA-Seq Expression	MC11g0365
Synteny	MC11g0365

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TCGAGGAGGAGCGGGTTCTCGTCCTACGACCGGTTGGTGGCAGTGGGGCTCGGCCTTCTGGCGGTGGTTTCACCGCTCTACATCGACCGGAGACCGACCGTTGAGCTGGACGAGGATGAGGAATCATCCATTAACTTCGGGTTCTGGTTGCCTGTTCTTCTGATAACCTTGATCTTTGTTATTGCTGGTTTGCTTCACTTGGAACAGAGATGTGCCAGGTTTGATGCTTACTGGATTCACAGAGTTGGTGGCTCTTCTTGTGGCATATTCTTCATTCTTCTGCTTCTTGCATTTGTTTTGAAGTGTAGAGCTTCTCTCGTGTTCTGGGAG

mRNA sequence

TCGAGGAGGAGCGGGTTCTCGTCCTACGACCGGTTGGTGGCAGTGGGGCTCGGCCTTCTGGCGGTGGTTTCACCGCTCTACATCGACCGGAGACCGACCGTTGAGCTGGACGAGGATGAGGAATCATCCATTAACTTCGGGTTCTGGTTGCCTGTTCTTCTGATAACCTTGATCTTTGTTATTGCTGGTTTGCTTCACTTGGAACAGAGATGTGCCAGGTTTGATGCTTACTGGATTCACAGAGTTGGTGGCTCTTCTTGTGGCATATTCTTCATTCTTCTGCTTCTTGCATTTGTTTTGAAGTGTAGAGCTTCTCTCGTGTTCTGGGAG

Coding sequence (CDS)

TCGAGGAGGAGCGGGTTCTCGTCCTACGACCGGTTGGTGGCAGTGGGGCTCGGCCTTCTGGCGGTGGTTTCACCGCTCTACATCGACCGGAGACCGACCGTTGAGCTGGACGAGGATGAGGAATCATCCATTAACTTCGGGTTCTGGTTGCCTGTTCTTCTGATAACCTTGATCTTTGTTATTGCTGGTTTGCTTCACTTGGAACAGAGATGTGCCAGGTTTGATGCTTACTGGATTCACAGAGTTGGTGGCTCTTCTTGTGGCATATTCTTCATTCTTCTGCTTCTTGCATTTGTTTTGAAGTGTAGAGCTTCTCTCGTGTTCTGGGAG

Protein sequence

SRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFVIAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVLKCRASLVFWE

Homology

[Close]

BLAST of MC11g0365 vs. NCBI nr
Match: XP_022142189.1 (uncharacterized protein LOC111012362 [Momordica charantia])

HSP 1 Score: 222 bits (566), Expect = 4.38e-73
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0


Query: 1   SRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFV 60
           SRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFV
Sbjct: 2   SRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFV 61

Query: 61  IAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVLKCRASLVFWE 110
           IAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVLKCRASLVFWE
Sbjct: 62  IAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVLKCRASLVFWE 111

[Close]

BLAST of MC11g0365 vs. NCBI nr
Match: XP_038899620.1 (uncharacterized protein LOC120086878 [Benincasa hispida])

HSP 1 Score: 196 bits (497), Expect = 1.90e-62
Identity = 95/110 (86.36%), Postives = 103/110 (93.64%), Query Frame = 0


Query: 1   SRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFV 60
           SRRS FSSYDR VAVGLGLLAVVSPLYIDRRP++E  E+EESSIN GFWLP LL+TLIF+
Sbjct: 9   SRRSRFSSYDRWVAVGLGLLAVVSPLYIDRRPSIEELEEEESSINLGFWLPALLMTLIFI 68

Query: 61  IAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVLKCRASLVFWE 110
           IAG+LHLEQRCARFDAYWIHRVGGSSCGIF ILLLLAFVLKC+ASL+FWE
Sbjct: 69  IAGVLHLEQRCARFDAYWIHRVGGSSCGIFIILLLLAFVLKCKASLMFWE 118

[Close]

BLAST of MC11g0365 vs. NCBI nr
Match: XP_022936874.1 (uncharacterized protein LOC111443331 [Cucurbita moschata] >XP_023534909.1 uncharacterized protein LOC111796500 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 194 bits (492), Expect = 1.10e-61
Identity = 91/110 (82.73%), Postives = 103/110 (93.64%), Query Frame = 0


Query: 1   SRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFV 60
           SRRS FSSYDR VAVGLG+LAVVSPLYIDRRP+ + +E+EESS+N GFWLP LLITLIF+
Sbjct: 9   SRRSRFSSYDRWVAVGLGILAVVSPLYIDRRPSFDAEEEEESSMNLGFWLPALLITLIFI 68

Query: 61  IAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVLKCRASLVFWE 110
           IAG+LHLEQRCARFDAYWIHRVGGSSCGIF +LLLLAFVLKC+ASL+FW+
Sbjct: 69  IAGVLHLEQRCARFDAYWIHRVGGSSCGIFIVLLLLAFVLKCKASLMFWD 118

[Close]

BLAST of MC11g0365 vs. NCBI nr
Match: XP_022977145.1 (uncharacterized protein LOC111477299 [Cucurbita maxima])

HSP 1 Score: 192 bits (489), Expect = 3.15e-61
Identity = 90/110 (81.82%), Postives = 103/110 (93.64%), Query Frame = 0


Query: 1   SRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFV 60
           SRRS FSSYDR VAVGLG+LAVVSPLYIDRRP+ + +E+EESS+N GFWLP LL+TLIF+
Sbjct: 9   SRRSRFSSYDRWVAVGLGILAVVSPLYIDRRPSFDAEEEEESSMNLGFWLPALLMTLIFI 68

Query: 61  IAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVLKCRASLVFWE 110
           IAG+LHLEQRCARFDAYWIHRVGGSSCGIF +LLLLAFVLKC+ASL+FW+
Sbjct: 69  IAGVLHLEQRCARFDAYWIHRVGGSSCGIFIVLLLLAFVLKCKASLMFWD 118

[Close]

BLAST of MC11g0365 vs. NCBI nr
Match: KAG6591490.1 (hypothetical protein SDJN03_13836, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 191 bits (486), Expect = 9.04e-61
Identity = 90/110 (81.82%), Postives = 102/110 (92.73%), Query Frame = 0


Query: 1   SRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFV 60
           SRRS FSSYDR VAVGLG+LAVVSPLYIDRRP+ + +E+EESS+N GFWLP LLITLIF+
Sbjct: 9   SRRSRFSSYDRWVAVGLGILAVVSPLYIDRRPSFDAEEEEESSMNLGFWLPALLITLIFI 68

Query: 61  IAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVLKCRASLVFWE 110
           IAG+LHLEQRCARFDAYWIHRVGGSSCGIF +LLLLAFVLKC+ASL+ W+
Sbjct: 69  IAGVLHLEQRCARFDAYWIHRVGGSSCGIFIVLLLLAFVLKCKASLMLWD 118

[Close]

BLAST of MC11g0365 vs. ExPASy TrEMBL
Match: A0A6J1CKV5 (uncharacterized protein LOC111012362 OS=Momordica charantia OX=3673 GN=LOC111012362 PE=4 SV=1)

HSP 1 Score: 222 bits (566), Expect = 2.12e-73
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0


Query: 1   SRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFV 60
           SRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFV
Sbjct: 2   SRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFV 61

Query: 61  IAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVLKCRASLVFWE 110
           IAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVLKCRASLVFWE
Sbjct: 62  IAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVLKCRASLVFWE 111

[Close]

BLAST of MC11g0365 vs. ExPASy TrEMBL
Match: A0A6J1F9J0 (uncharacterized protein LOC111443331 OS=Cucurbita moschata OX=3662 GN=LOC111443331 PE=4 SV=1)

HSP 1 Score: 194 bits (492), Expect = 5.32e-62
Identity = 91/110 (82.73%), Postives = 103/110 (93.64%), Query Frame = 0


Query: 1   SRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFV 60
           SRRS FSSYDR VAVGLG+LAVVSPLYIDRRP+ + +E+EESS+N GFWLP LLITLIF+
Sbjct: 9   SRRSRFSSYDRWVAVGLGILAVVSPLYIDRRPSFDAEEEEESSMNLGFWLPALLITLIFI 68

Query: 61  IAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVLKCRASLVFWE 110
           IAG+LHLEQRCARFDAYWIHRVGGSSCGIF +LLLLAFVLKC+ASL+FW+
Sbjct: 69  IAGVLHLEQRCARFDAYWIHRVGGSSCGIFIVLLLLAFVLKCKASLMFWD 118

[Close]

BLAST of MC11g0365 vs. ExPASy TrEMBL
Match: A0A6J1ILG7 (uncharacterized protein LOC111477299 OS=Cucurbita maxima OX=3661 GN=LOC111477299 PE=4 SV=1)

HSP 1 Score: 192 bits (489), Expect = 1.53e-61
Identity = 90/110 (81.82%), Postives = 103/110 (93.64%), Query Frame = 0


Query: 1   SRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFV 60
           SRRS FSSYDR VAVGLG+LAVVSPLYIDRRP+ + +E+EESS+N GFWLP LL+TLIF+
Sbjct: 9   SRRSRFSSYDRWVAVGLGILAVVSPLYIDRRPSFDAEEEEESSMNLGFWLPALLMTLIFI 68

Query: 61  IAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVLKCRASLVFWE 110
           IAG+LHLEQRCARFDAYWIHRVGGSSCGIF +LLLLAFVLKC+ASL+FW+
Sbjct: 69  IAGVLHLEQRCARFDAYWIHRVGGSSCGIFIVLLLLAFVLKCKASLMFWD 118

[Close]

BLAST of MC11g0365 vs. ExPASy TrEMBL
Match: A0A5D3D907 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G001720 PE=4 SV=1)

HSP 1 Score: 189 bits (481), Expect = 2.53e-60
Identity = 92/110 (83.64%), Postives = 101/110 (91.82%), Query Frame = 0


Query: 1   SRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFV 60
           SRRS FSSYDR +AVGLGLLAVVSPLYIDRRP++E  E+EESSI+ GFWLP LLI LIF+
Sbjct: 9   SRRSRFSSYDRWLAVGLGLLAVVSPLYIDRRPSIEELEEEESSIHLGFWLPALLIILIFI 68

Query: 61  IAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVLKCRASLVFWE 110
           IAG+LHLEQRCARFD YWIHRVGGSSCGIF ILLLLAFVLKC+ASL+FWE
Sbjct: 69  IAGVLHLEQRCARFDPYWIHRVGGSSCGIFIILLLLAFVLKCKASLMFWE 118

[Close]

BLAST of MC11g0365 vs. ExPASy TrEMBL
Match: A0A1S3BUL9 (uncharacterized protein LOC103493702 OS=Cucumis melo OX=3656 GN=LOC103493702 PE=4 SV=1)

HSP 1 Score: 189 bits (481), Expect = 2.53e-60
Identity = 92/110 (83.64%), Postives = 101/110 (91.82%), Query Frame = 0


Query: 1   SRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFV 60
           SRRS FSSYDR +AVGLGLLAVVSPLYIDRRP++E  E+EESSI+ GFWLP LLI LIF+
Sbjct: 9   SRRSRFSSYDRWLAVGLGLLAVVSPLYIDRRPSIEELEEEESSIHLGFWLPALLIILIFI 68

Query: 61  IAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVLKCRASLVFWE 110
           IAG+LHLEQRCARFD YWIHRVGGSSCGIF ILLLLAFVLKC+ASL+FWE
Sbjct: 69  IAGVLHLEQRCARFDPYWIHRVGGSSCGIFIILLLLAFVLKCKASLMFWE 118

[Close]

BLAST of MC11g0365 vs. TAIR 10
Match: AT5G21910.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 88.2 bits (217), Expect = 4.5e-18
Identity = 48/100 (48.00%), Postives = 67/100 (67.00%), Query Frame = 0


Query: 6   FSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFVIAGLL 65
           F++  +L+A+ L +LAV+SPLYIDR    +L+E+EE   +F F   +LL+ LI  IA  L
Sbjct: 13  FTTSRKLLAISLSVLAVLSPLYIDRLSEEDLEEEEE-LFSFMFSFSLLLLLLILAIALSL 72

Query: 66  HLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVLKCRAS 106
           + +    RFD YWIHR+ GS  G+  IL+LL FVL C+AS
Sbjct: 73  YSDPSLTRFDPYWIHRLCGSFGGLLVILILLVFVLICKAS 111

The following BLAST results are available for this feature:

BLAST of MC11g0365 vs.


Match Name	E-value	Identity	Description

BLAST of MC11g0365 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142189.1	4.38e-73	100.00	uncharacterized protein LOC111012362 [Momordica charantia]	[more]
XP_038899620.1	1.90e-62	86.36	uncharacterized protein LOC120086878 [Benincasa hispida]	[more]
XP_022936874.1	1.10e-61	82.73	uncharacterized protein LOC111443331 [Cucurbita moschata] >XP_023534909.1 unchar...	[more]
XP_022977145.1	3.15e-61	81.82	uncharacterized protein LOC111477299 [Cucurbita maxima]	[more]
KAG6591490.1	9.04e-61	81.82	hypothetical protein SDJN03_13836, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of MC11g0365 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CKV5	2.12e-73	100.00	uncharacterized protein LOC111012362 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]
A0A6J1F9J0	5.32e-62	82.73	uncharacterized protein LOC111443331 OS=Cucurbita moschata OX=3662 GN=LOC1114433...	[more]
A0A6J1ILG7	1.53e-61	81.82	uncharacterized protein LOC111477299 OS=Cucurbita maxima OX=3661 GN=LOC111477299...	[more]
A0A5D3D907	2.53e-60	83.64	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BUL9	2.53e-60	83.64	uncharacterized protein LOC103493702 OS=Cucumis melo OX=3656 GN=LOC103493702 PE=...	[more]

BLAST of MC11g0365 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G21910.1	4.5e-18	48.00	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35758	TRANSMEMBRANE PROTEIN	coord: 3..106
None	No IPR available	PANTHER	PTHR35758:SF2	TRANSMEMBRANE PROTEIN	coord: 3..106

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC11g0365.1	MC11g0365.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane