MC11g0365 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC11g0365
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionTransmembrane protein
LocationMC11: 2837453 .. 2837782 (-)
RNA-Seq ExpressionMC11g0365
SyntenyMC11g0365
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TCGAGGAGGAGCGGGTTCTCGTCCTACGACCGGTTGGTGGCAGTGGGGCTCGGCCTTCTGGCGGTGGTTTCACCGCTCTACATCGACCGGAGACCGACCGTTGAGCTGGACGAGGATGAGGAATCATCCATTAACTTCGGGTTCTGGTTGCCTGTTCTTCTGATAACCTTGATCTTTGTTATTGCTGGTTTGCTTCACTTGGAACAGAGATGTGCCAGGTTTGATGCTTACTGGATTCACAGAGTTGGTGGCTCTTCTTGTGGCATATTCTTCATTCTTCTGCTTCTTGCATTTGTTTTGAAGTGTAGAGCTTCTCTCGTGTTCTGGGAG

mRNA sequence

TCGAGGAGGAGCGGGTTCTCGTCCTACGACCGGTTGGTGGCAGTGGGGCTCGGCCTTCTGGCGGTGGTTTCACCGCTCTACATCGACCGGAGACCGACCGTTGAGCTGGACGAGGATGAGGAATCATCCATTAACTTCGGGTTCTGGTTGCCTGTTCTTCTGATAACCTTGATCTTTGTTATTGCTGGTTTGCTTCACTTGGAACAGAGATGTGCCAGGTTTGATGCTTACTGGATTCACAGAGTTGGTGGCTCTTCTTGTGGCATATTCTTCATTCTTCTGCTTCTTGCATTTGTTTTGAAGTGTAGAGCTTCTCTCGTGTTCTGGGAG

Coding sequence (CDS)

TCGAGGAGGAGCGGGTTCTCGTCCTACGACCGGTTGGTGGCAGTGGGGCTCGGCCTTCTGGCGGTGGTTTCACCGCTCTACATCGACCGGAGACCGACCGTTGAGCTGGACGAGGATGAGGAATCATCCATTAACTTCGGGTTCTGGTTGCCTGTTCTTCTGATAACCTTGATCTTTGTTATTGCTGGTTTGCTTCACTTGGAACAGAGATGTGCCAGGTTTGATGCTTACTGGATTCACAGAGTTGGTGGCTCTTCTTGTGGCATATTCTTCATTCTTCTGCTTCTTGCATTTGTTTTGAAGTGTAGAGCTTCTCTCGTGTTCTGGGAG

Protein sequence

SRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFVIAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVLKCRASLVFWE
Homology
BLAST of MC11g0365 vs. NCBI nr
Match: XP_022142189.1 (uncharacterized protein LOC111012362 [Momordica charantia])

HSP 1 Score: 222 bits (566), Expect = 4.38e-73
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0

Query: 1   SRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFV 60
           SRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFV
Sbjct: 2   SRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFV 61

Query: 61  IAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVLKCRASLVFWE 110
           IAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVLKCRASLVFWE
Sbjct: 62  IAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVLKCRASLVFWE 111

BLAST of MC11g0365 vs. NCBI nr
Match: XP_038899620.1 (uncharacterized protein LOC120086878 [Benincasa hispida])

HSP 1 Score: 196 bits (497), Expect = 1.90e-62
Identity = 95/110 (86.36%), Postives = 103/110 (93.64%), Query Frame = 0

Query: 1   SRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFV 60
           SRRS FSSYDR VAVGLGLLAVVSPLYIDRRP++E  E+EESSIN GFWLP LL+TLIF+
Sbjct: 9   SRRSRFSSYDRWVAVGLGLLAVVSPLYIDRRPSIEELEEEESSINLGFWLPALLMTLIFI 68

Query: 61  IAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVLKCRASLVFWE 110
           IAG+LHLEQRCARFDAYWIHRVGGSSCGIF ILLLLAFVLKC+ASL+FWE
Sbjct: 69  IAGVLHLEQRCARFDAYWIHRVGGSSCGIFIILLLLAFVLKCKASLMFWE 118

BLAST of MC11g0365 vs. NCBI nr
Match: XP_022936874.1 (uncharacterized protein LOC111443331 [Cucurbita moschata] >XP_023534909.1 uncharacterized protein LOC111796500 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 194 bits (492), Expect = 1.10e-61
Identity = 91/110 (82.73%), Postives = 103/110 (93.64%), Query Frame = 0

Query: 1   SRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFV 60
           SRRS FSSYDR VAVGLG+LAVVSPLYIDRRP+ + +E+EESS+N GFWLP LLITLIF+
Sbjct: 9   SRRSRFSSYDRWVAVGLGILAVVSPLYIDRRPSFDAEEEEESSMNLGFWLPALLITLIFI 68

Query: 61  IAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVLKCRASLVFWE 110
           IAG+LHLEQRCARFDAYWIHRVGGSSCGIF +LLLLAFVLKC+ASL+FW+
Sbjct: 69  IAGVLHLEQRCARFDAYWIHRVGGSSCGIFIVLLLLAFVLKCKASLMFWD 118

BLAST of MC11g0365 vs. NCBI nr
Match: XP_022977145.1 (uncharacterized protein LOC111477299 [Cucurbita maxima])

HSP 1 Score: 192 bits (489), Expect = 3.15e-61
Identity = 90/110 (81.82%), Postives = 103/110 (93.64%), Query Frame = 0

Query: 1   SRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFV 60
           SRRS FSSYDR VAVGLG+LAVVSPLYIDRRP+ + +E+EESS+N GFWLP LL+TLIF+
Sbjct: 9   SRRSRFSSYDRWVAVGLGILAVVSPLYIDRRPSFDAEEEEESSMNLGFWLPALLMTLIFI 68

Query: 61  IAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVLKCRASLVFWE 110
           IAG+LHLEQRCARFDAYWIHRVGGSSCGIF +LLLLAFVLKC+ASL+FW+
Sbjct: 69  IAGVLHLEQRCARFDAYWIHRVGGSSCGIFIVLLLLAFVLKCKASLMFWD 118

BLAST of MC11g0365 vs. NCBI nr
Match: KAG6591490.1 (hypothetical protein SDJN03_13836, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 191 bits (486), Expect = 9.04e-61
Identity = 90/110 (81.82%), Postives = 102/110 (92.73%), Query Frame = 0

Query: 1   SRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFV 60
           SRRS FSSYDR VAVGLG+LAVVSPLYIDRRP+ + +E+EESS+N GFWLP LLITLIF+
Sbjct: 9   SRRSRFSSYDRWVAVGLGILAVVSPLYIDRRPSFDAEEEEESSMNLGFWLPALLITLIFI 68

Query: 61  IAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVLKCRASLVFWE 110
           IAG+LHLEQRCARFDAYWIHRVGGSSCGIF +LLLLAFVLKC+ASL+ W+
Sbjct: 69  IAGVLHLEQRCARFDAYWIHRVGGSSCGIFIVLLLLAFVLKCKASLMLWD 118

BLAST of MC11g0365 vs. ExPASy TrEMBL
Match: A0A6J1CKV5 (uncharacterized protein LOC111012362 OS=Momordica charantia OX=3673 GN=LOC111012362 PE=4 SV=1)

HSP 1 Score: 222 bits (566), Expect = 2.12e-73
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0

Query: 1   SRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFV 60
           SRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFV
Sbjct: 2   SRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFV 61

Query: 61  IAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVLKCRASLVFWE 110
           IAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVLKCRASLVFWE
Sbjct: 62  IAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVLKCRASLVFWE 111

BLAST of MC11g0365 vs. ExPASy TrEMBL
Match: A0A6J1F9J0 (uncharacterized protein LOC111443331 OS=Cucurbita moschata OX=3662 GN=LOC111443331 PE=4 SV=1)

HSP 1 Score: 194 bits (492), Expect = 5.32e-62
Identity = 91/110 (82.73%), Postives = 103/110 (93.64%), Query Frame = 0

Query: 1   SRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFV 60
           SRRS FSSYDR VAVGLG+LAVVSPLYIDRRP+ + +E+EESS+N GFWLP LLITLIF+
Sbjct: 9   SRRSRFSSYDRWVAVGLGILAVVSPLYIDRRPSFDAEEEEESSMNLGFWLPALLITLIFI 68

Query: 61  IAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVLKCRASLVFWE 110
           IAG+LHLEQRCARFDAYWIHRVGGSSCGIF +LLLLAFVLKC+ASL+FW+
Sbjct: 69  IAGVLHLEQRCARFDAYWIHRVGGSSCGIFIVLLLLAFVLKCKASLMFWD 118

BLAST of MC11g0365 vs. ExPASy TrEMBL
Match: A0A6J1ILG7 (uncharacterized protein LOC111477299 OS=Cucurbita maxima OX=3661 GN=LOC111477299 PE=4 SV=1)

HSP 1 Score: 192 bits (489), Expect = 1.53e-61
Identity = 90/110 (81.82%), Postives = 103/110 (93.64%), Query Frame = 0

Query: 1   SRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFV 60
           SRRS FSSYDR VAVGLG+LAVVSPLYIDRRP+ + +E+EESS+N GFWLP LL+TLIF+
Sbjct: 9   SRRSRFSSYDRWVAVGLGILAVVSPLYIDRRPSFDAEEEEESSMNLGFWLPALLMTLIFI 68

Query: 61  IAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVLKCRASLVFWE 110
           IAG+LHLEQRCARFDAYWIHRVGGSSCGIF +LLLLAFVLKC+ASL+FW+
Sbjct: 69  IAGVLHLEQRCARFDAYWIHRVGGSSCGIFIVLLLLAFVLKCKASLMFWD 118

BLAST of MC11g0365 vs. ExPASy TrEMBL
Match: A0A5D3D907 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G001720 PE=4 SV=1)

HSP 1 Score: 189 bits (481), Expect = 2.53e-60
Identity = 92/110 (83.64%), Postives = 101/110 (91.82%), Query Frame = 0

Query: 1   SRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFV 60
           SRRS FSSYDR +AVGLGLLAVVSPLYIDRRP++E  E+EESSI+ GFWLP LLI LIF+
Sbjct: 9   SRRSRFSSYDRWLAVGLGLLAVVSPLYIDRRPSIEELEEEESSIHLGFWLPALLIILIFI 68

Query: 61  IAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVLKCRASLVFWE 110
           IAG+LHLEQRCARFD YWIHRVGGSSCGIF ILLLLAFVLKC+ASL+FWE
Sbjct: 69  IAGVLHLEQRCARFDPYWIHRVGGSSCGIFIILLLLAFVLKCKASLMFWE 118

BLAST of MC11g0365 vs. ExPASy TrEMBL
Match: A0A1S3BUL9 (uncharacterized protein LOC103493702 OS=Cucumis melo OX=3656 GN=LOC103493702 PE=4 SV=1)

HSP 1 Score: 189 bits (481), Expect = 2.53e-60
Identity = 92/110 (83.64%), Postives = 101/110 (91.82%), Query Frame = 0

Query: 1   SRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFV 60
           SRRS FSSYDR +AVGLGLLAVVSPLYIDRRP++E  E+EESSI+ GFWLP LLI LIF+
Sbjct: 9   SRRSRFSSYDRWLAVGLGLLAVVSPLYIDRRPSIEELEEEESSIHLGFWLPALLIILIFI 68

Query: 61  IAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVLKCRASLVFWE 110
           IAG+LHLEQRCARFD YWIHRVGGSSCGIF ILLLLAFVLKC+ASL+FWE
Sbjct: 69  IAGVLHLEQRCARFDPYWIHRVGGSSCGIFIILLLLAFVLKCKASLMFWE 118

BLAST of MC11g0365 vs. TAIR 10
Match: AT5G21910.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 88.2 bits (217), Expect = 4.5e-18
Identity = 48/100 (48.00%), Postives = 67/100 (67.00%), Query Frame = 0

Query: 6   FSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFVIAGLL 65
           F++  +L+A+ L +LAV+SPLYIDR    +L+E+EE   +F F   +LL+ LI  IA  L
Sbjct: 13  FTTSRKLLAISLSVLAVLSPLYIDRLSEEDLEEEEE-LFSFMFSFSLLLLLLILAIALSL 72

Query: 66  HLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVLKCRAS 106
           + +    RFD YWIHR+ GS  G+  IL+LL FVL C+AS
Sbjct: 73  YSDPSLTRFDPYWIHRLCGSFGGLLVILILLVFVLICKAS 111

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022142189.14.38e-73100.00uncharacterized protein LOC111012362 [Momordica charantia][more]
XP_038899620.11.90e-6286.36uncharacterized protein LOC120086878 [Benincasa hispida][more]
XP_022936874.11.10e-6182.73uncharacterized protein LOC111443331 [Cucurbita moschata] >XP_023534909.1 unchar... [more]
XP_022977145.13.15e-6181.82uncharacterized protein LOC111477299 [Cucurbita maxima][more]
KAG6591490.19.04e-6181.82hypothetical protein SDJN03_13836, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
A0A6J1CKV52.12e-73100.00uncharacterized protein LOC111012362 OS=Momordica charantia OX=3673 GN=LOC111012... [more]
A0A6J1F9J05.32e-6282.73uncharacterized protein LOC111443331 OS=Cucurbita moschata OX=3662 GN=LOC1114433... [more]
A0A6J1ILG71.53e-6181.82uncharacterized protein LOC111477299 OS=Cucurbita maxima OX=3661 GN=LOC111477299... [more]
A0A5D3D9072.53e-6083.64Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3BUL92.53e-6083.64uncharacterized protein LOC103493702 OS=Cucumis melo OX=3656 GN=LOC103493702 PE=... [more]
Match NameE-valueIdentityDescription
AT5G21910.14.5e-1848.00unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35758TRANSMEMBRANE PROTEINcoord: 3..106
NoneNo IPR availablePANTHERPTHR35758:SF2TRANSMEMBRANE PROTEINcoord: 3..106

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC11g0365.1MC11g0365.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane