Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGCTCGGCTGCTTCTGTTAATGGCGGTTTTCACTCTTCTGGTCTCCGGGGAAAACCAACAGACAATGGGGGTCGTCGTCGATATGCAAGGTCGCCACCGGAAGCAGCTGCCGTCGCCACCATCGCCGCAGCCGTGGAAGCACTCATTCAATGCGCTGTTTTCAAGCAAGAGGAGGGTCCCAAACACATCGGATCCACTCCATAATCGT
mRNA sequence
ATGGAAGCTCGGCTGCTTCTGTTAATGGCGGTTTTCACTCTTCTGGTCTCCGGGGAAAACCAACAGACAATGGGGGTCGTCGTCGATATGCAAGGTCGCCACCGGAAGCAGCTGCCGTCGCCACCATCGCCGCAGCCGTGGAAGCACTCATTCAATGCGCTGTTTTCAAGCAAGAGGAGGGTCCCAAACACATCGGATCCACTCCATAATCGT
Coding sequence (CDS)
ATGGAAGCTCGGCTGCTTCTGTTAATGGCGGTTTTCACTCTTCTGGTCTCCGGGGAAAACCAACAGACAATGGGGGTCGTCGTCGATATGCAAGGTCGCCACCGGAAGCAGCTGCCGTCGCCACCATCGCCGCAGCCGTGGAAGCACTCATTCAATGCGCTGTTTTCAAGCAAGAGGAGGGTCCCAAACACATCGGATCCACTCCATAATCGT
Protein sequence
MEARLLLLMAVFTLLVSGENQQTMGVVVDMQGRHRKQLPSPPSPQPWKHSFNALFSSKRRVPNTSDPLHNR
Homology
BLAST of MC11g0264 vs. NCBI nr
Match:
KAE8649873.1 (hypothetical protein Csa_012848, partial [Cucumis sativus])
HSP 1 Score: 68.6 bits (166), Expect = 2.61e-13
Identity = 37/69 (53.62%), Postives = 44/69 (63.77%), Query Frame = 0
Query: 13 TLLVSGENQQTMGVVV----------DMQGRHRKQLPSPPSPQPWKHSFNALFSSKRRVP 71
TLLVSG+N+ TMG +MQ +HRK L SP P H FNALF+SKR+VP
Sbjct: 2 TLLVSGDNKATMGAAAVAFIDQHPLSNMQEKHRKHLQLLSSPPPRSHLFNALFASKRKVP 61
BLAST of MC11g0264 vs. NCBI nr
Match:
KAA0064426.1 (hypothetical protein E6C27_scaffold255G001340 [Cucumis melo var. makuwa] >TYK20161.1 hypothetical protein E5676_scaffold134G002930 [Cucumis melo var. makuwa])
HSP 1 Score: 64.3 bits (155), Expect = 2.61e-11
Identity = 41/72 (56.94%), Postives = 46/72 (63.89%), Query Frame = 0
Query: 1 MEARLLLLMAVFTLLVSGENQQTMGVVV---------DMQGRHRKQLPSPPSPQPWKHSF 60
MEARLLLLMAV TLLVSG N+ TMGV V +MQ +HRK L SP H F
Sbjct: 1 MEARLLLLMAVITLLVSGNNKATMGVAVALVDQHPLSNMQEKHRKHLQLLSSPPLRSHLF 60
Query: 61 NALFSSKRRVPN 63
NALF+SKR+ N
Sbjct: 61 NALFASKRKSMN 72
BLAST of MC11g0264 vs. NCBI nr
Match:
KDP41663.1 (hypothetical protein JCGZ_16070 [Jatropha curcas])
HSP 1 Score: 56.6 bits (135), Expect = 1.46e-08
Identity = 31/70 (44.29%), Postives = 47/70 (67.14%), Query Frame = 0
Query: 2 EARLLLLMAVFTLLVSGENQQTMGVVVDMQGRHRKQLPSPPSPQPWKHSFNALFSSKRRV 61
+ ++++L+ +++LLVSGE ++TM V + R+Q Q + SF+ LFSSKR+V
Sbjct: 8 QKKIIVLILLYSLLVSGEKEETMAVTHADDKQPRRQEKH----QRLRSSFDVLFSSKRKV 67
Query: 62 PNTSDPLHNR 71
PN SDPLHNR
Sbjct: 68 PNASDPLHNR 73
BLAST of MC11g0264 vs. NCBI nr
Match:
OMO70596.1 (hypothetical protein COLO4_28570 [Corchorus olitorius])
HSP 1 Score: 55.8 bits (133), Expect = 4.30e-08
Identity = 34/72 (47.22%), Postives = 48/72 (66.67%), Query Frame = 0
Query: 6 LLLMAVFTLLVSGE-NQQTMGVVVDM--QGRHRKQLPSPPSPQPW---KHSFNALFSSKR 65
++L+ +F LLVSG+ N+++M +++ QG Q + QP +HSF+A FSSKR
Sbjct: 18 IVLLLLFLLLVSGDQNEESMFAAMNVHSQGDKENQTVNQKQQQPQQRLRHSFDAFFSSKR 77
Query: 66 RVPNTSDPLHNR 71
RVPN SDPLHNR
Sbjct: 78 RVPNASDPLHNR 89
BLAST of MC11g0264 vs. NCBI nr
Match:
OMO78847.1 (hypothetical protein CCACVL1_14077 [Corchorus capsularis])
HSP 1 Score: 55.5 bits (132), Expect = 5.05e-08
Identity = 33/73 (45.21%), Postives = 48/73 (65.75%), Query Frame = 0
Query: 6 LLLMAVFTLLVSGE---NQQTMGVVVDMQ---GRHRKQLPSPPSPQP-WKHSFNALFSSK 65
++L+ VF LLVSG+ N+++M +++ G+ + + P PQ +HSF+ FSSK
Sbjct: 9 IVLLLVFLLLVSGDDQKNEESMFAAMNVHSQGGKKNQTVNQKPQPQQRLRHSFDFFFSSK 68
Query: 66 RRVPNTSDPLHNR 71
RRVPN SDPLHNR
Sbjct: 69 RRVPNASDPLHNR 81
BLAST of MC11g0264 vs. ExPASy TrEMBL
Match:
A0A0A0KZW1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G641770 PE=4 SV=1)
HSP 1 Score: 84.7 bits (208), Expect = 6.78e-20
Identity = 48/81 (59.26%), Postives = 55/81 (67.90%), Query Frame = 0
Query: 1 MEARLLLLMAVFTLLVSGENQQTMGVVV----------DMQGRHRKQLPSPPSPQPWKHS 60
MEARLLLLMAV TLLVSG+N+ TMG +MQ +HRK L SP P H
Sbjct: 1 MEARLLLLMAVITLLVSGDNKATMGAAAVAFIDQHPLSNMQEKHRKHLQLLSSPPPRSHL 60
Query: 61 FNALFSSKRRVPNTSDPLHNR 71
FNALF+SKR+VPNT DP+HNR
Sbjct: 61 FNALFASKRKVPNTWDPIHNR 81
BLAST of MC11g0264 vs. ExPASy TrEMBL
Match:
A0A5D3D9C5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G002930 PE=4 SV=1)
HSP 1 Score: 64.3 bits (155), Expect = 1.26e-11
Identity = 41/72 (56.94%), Postives = 46/72 (63.89%), Query Frame = 0
Query: 1 MEARLLLLMAVFTLLVSGENQQTMGVVV---------DMQGRHRKQLPSPPSPQPWKHSF 60
MEARLLLLMAV TLLVSG N+ TMGV V +MQ +HRK L SP H F
Sbjct: 1 MEARLLLLMAVITLLVSGNNKATMGVAVALVDQHPLSNMQEKHRKHLQLLSSPPLRSHLF 60
Query: 61 NALFSSKRRVPN 63
NALF+SKR+ N
Sbjct: 61 NALFASKRKSMN 72
BLAST of MC11g0264 vs. ExPASy TrEMBL
Match:
A0A067L375 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_16070 PE=4 SV=1)
HSP 1 Score: 56.6 bits (135), Expect = 7.07e-09
Identity = 31/70 (44.29%), Postives = 47/70 (67.14%), Query Frame = 0
Query: 2 EARLLLLMAVFTLLVSGENQQTMGVVVDMQGRHRKQLPSPPSPQPWKHSFNALFSSKRRV 61
+ ++++L+ +++LLVSGE ++TM V + R+Q Q + SF+ LFSSKR+V
Sbjct: 8 QKKIIVLILLYSLLVSGEKEETMAVTHADDKQPRRQEKH----QRLRSSFDVLFSSKRKV 67
Query: 62 PNTSDPLHNR 71
PN SDPLHNR
Sbjct: 68 PNASDPLHNR 73
BLAST of MC11g0264 vs. ExPASy TrEMBL
Match:
A0A1R3HJP1 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_28570 PE=4 SV=1)
HSP 1 Score: 55.8 bits (133), Expect = 2.08e-08
Identity = 34/72 (47.22%), Postives = 48/72 (66.67%), Query Frame = 0
Query: 6 LLLMAVFTLLVSGE-NQQTMGVVVDM--QGRHRKQLPSPPSPQPW---KHSFNALFSSKR 65
++L+ +F LLVSG+ N+++M +++ QG Q + QP +HSF+A FSSKR
Sbjct: 18 IVLLLLFLLLVSGDQNEESMFAAMNVHSQGDKENQTVNQKQQQPQQRLRHSFDAFFSSKR 77
Query: 66 RVPNTSDPLHNR 71
RVPN SDPLHNR
Sbjct: 78 RVPNASDPLHNR 89
BLAST of MC11g0264 vs. ExPASy TrEMBL
Match:
A0A1R3I8C4 (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_14077 PE=4 SV=1)
HSP 1 Score: 55.5 bits (132), Expect = 2.44e-08
Identity = 33/73 (45.21%), Postives = 48/73 (65.75%), Query Frame = 0
Query: 6 LLLMAVFTLLVSGE---NQQTMGVVVDMQ---GRHRKQLPSPPSPQP-WKHSFNALFSSK 65
++L+ VF LLVSG+ N+++M +++ G+ + + P PQ +HSF+ FSSK
Sbjct: 9 IVLLLVFLLLVSGDDQKNEESMFAAMNVHSQGGKKNQTVNQKPQPQQRLRHSFDFFFSSK 68
Query: 66 RRVPNTSDPLHNR 71
RRVPN SDPLHNR
Sbjct: 69 RRVPNASDPLHNR 81
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| KAE8649873.1 | 2.61e-13 | 53.62 | hypothetical protein Csa_012848, partial [Cucumis sativus] | [more] |
| KAA0064426.1 | 2.61e-11 | 56.94 | hypothetical protein E6C27_scaffold255G001340 [Cucumis melo var. makuwa] >TYK201... | [more] |
| KDP41663.1 | 1.46e-08 | 44.29 | hypothetical protein JCGZ_16070 [Jatropha curcas] | [more] |
| OMO70596.1 | 4.30e-08 | 47.22 | hypothetical protein COLO4_28570 [Corchorus olitorius] | [more] |
| OMO78847.1 | 5.05e-08 | 45.21 | hypothetical protein CCACVL1_14077 [Corchorus capsularis] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0KZW1 | 6.78e-20 | 59.26 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G641770 PE=4 SV=1 | [more] |
| A0A5D3D9C5 | 1.26e-11 | 56.94 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A067L375 | 7.07e-09 | 44.29 | Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_16070 PE=4 SV=1 | [more] |
| A0A1R3HJP1 | 2.08e-08 | 47.22 | Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_28570 PE=4 SV=1 | [more] |
| A0A1R3I8C4 | 2.44e-08 | 45.21 | Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_14077 PE=4 ... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
