Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCTGCCAAAATCTAATGAAATTCTGCGCTCTGGCGGTGGTTTTTGCGGCACTGATTTATGGGTCAATGGCGGATGGTTTGAAAAATGGCACAATGCGTACTAATGTCACTTTTCTGACGTTCTCGGAGGGAAGAAATGAGAGCTCTAGCAATACTACTACTACGGTTGAGGTGAGCAAGCAGAACGGCTCCGGCAGAGGAGGCGGCGGTGGCTATGGGTGGGGGTGGGGGTGGGGCGGCGGAGGAGGCGGCGGCGGAGGTGGGTGGTGGAAATGGGGTTGTGGAGGACAGCCGAAATCGGGACGCGGCGGCGGAGGGAGAAGAAGAGGGTCCGGGAGGAATCAAAATCATGTATTCAGGAAGAGAATGTACGATGAGGGAGATTATAAAACAGGGGAATTTGGTCAATGCGTGGTGAGAGGAAGATGCAGAGGAATGAGATTGGACTGCCCACTTCACTGCGGCGGGCCTTGCTTCTACGACTGCCGGTACATGTGCAAGGCCCACTGCCGA
mRNA sequence
ATGGCCTGCCAAAATCTAATGAAATTCTGCGCTCTGGCGGTGGTTTTTGCGGCACTGATTTATGGGTCAATGGCGGATGGTTTGAAAAATGGCACAATGCGTACTAATGTCACTTTTCTGACGTTCTCGGAGGGAAGAAATGAGAGCTCTAGCAATACTACTACTACGGTTGAGGTGAGCAAGCAGAACGGCTCCGGCAGAGGAGGCGGCGGTGGCTATGGGTGGGGGTGGGGGTGGGGCGGCGGAGGAGGCGGCGGCGGAGGTGGGTGGTGGAAATGGGGTTGTGGAGGACAGCCGAAATCGGGACGCGGCGGCGGAGGGAGAAGAAGAGGGTCCGGGAGGAATCAAAATCATGTATTCAGGAAGAGAATGTACGATGAGGGAGATTATAAAACAGGGGAATTTGGTCAATGCGTGGTGAGAGGAAGATGCAGAGGAATGAGATTGGACTGCCCACTTCACTGCGGCGGGCCTTGCTTCTACGACTGCCGGTACATGTGCAAGGCCCACTGCCGA
Coding sequence (CDS)
ATGGCCTGCCAAAATCTAATGAAATTCTGCGCTCTGGCGGTGGTTTTTGCGGCACTGATTTATGGGTCAATGGCGGATGGTTTGAAAAATGGCACAATGCGTACTAATGTCACTTTTCTGACGTTCTCGGAGGGAAGAAATGAGAGCTCTAGCAATACTACTACTACGGTTGAGGTGAGCAAGCAGAACGGCTCCGGCAGAGGAGGCGGCGGTGGCTATGGGTGGGGGTGGGGGTGGGGCGGCGGAGGAGGCGGCGGCGGAGGTGGGTGGTGGAAATGGGGTTGTGGAGGACAGCCGAAATCGGGACGCGGCGGCGGAGGGAGAAGAAGAGGGTCCGGGAGGAATCAAAATCATGTATTCAGGAAGAGAATGTACGATGAGGGAGATTATAAAACAGGGGAATTTGGTCAATGCGTGGTGAGAGGAAGATGCAGAGGAATGAGATTGGACTGCCCACTTCACTGCGGCGGGCCTTGCTTCTACGACTGCCGGTACATGTGCAAGGCCCACTGCCGA
Protein sequence
MACQNLMKFCALAVVFAALIYGSMADGLKNGTMRTNVTFLTFSEGRNESSSNTTTTVEVSKQNGSGRGGGGGYGWGWGWGGGGGGGGGGWWKWGCGGQPKSGRGGGGRRRGSGRNQNHVFRKRMYDEGDYKTGEFGQCVVRGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCR
Homology
BLAST of MC11g0131 vs. NCBI nr
Match:
KAG6608571.1 (hypothetical protein SDJN03_01913, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 194 bits (494), Expect = 1.83e-59
Identity = 116/182 (63.74%), Postives = 126/182 (69.23%), Query Frame = 0
Query: 14 VVFAALIYGSMADGLKNGTMRTNVTFLTFSE------GRNESSSNTTTTVEVSKQNGSGR 73
V F +YGS A+GLKNGT FLTFSE G +SS TTTVEVSKQN R
Sbjct: 53 VFFGVAVYGSRAEGLKNGT------FLTFSELPRGNAGEGRNSSGNTTTVEVSKQN---R 112
Query: 74 GGGGGYGWGWGWGGGGGGGGGG-----------------WWKWGCGGQPKSGRGGGGRRR 133
GGGGGYGWGWG GGGGGGGGGG WWKWGCGGQPKSGR GGGRR+
Sbjct: 113 GGGGGYGWGWGGGGGGGGGGGGGGGGGGGGWGWGGGGGGWWKWGCGGQPKSGRRGGGRRK 172
Query: 134 GSGRNQNHVFRKRMYDEGDYKTGEFGQCVVRGRCRGMRLDCPLHCGGPCFYDCRYMCKAH 172
+V RKR+Y+E DY GEF +C+V+GRCRGMRLDCPLHCGGPCFYDCRYMCKAH
Sbjct: 173 -------NVDRKRIYNEEDYSMGEFAECMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAH 218
BLAST of MC11g0131 vs. NCBI nr
Match:
KAG7037889.1 (hypothetical protein SDJN02_01520, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 192 bits (488), Expect = 1.02e-58
Identity = 115/187 (61.50%), Postives = 126/187 (67.38%), Query Frame = 0
Query: 14 VVFAALIYGSMADGLKNGTMRTNVTFLTFSE------GRNESSSNTTTTVEVSKQNGSGR 73
+ F +YGS A+GLKNGT FLTFSE G +SS TTTVEVSKQN R
Sbjct: 36 IFFGVAVYGSRAEGLKNGT------FLTFSELPRGNAGEGRNSSGNTTTVEVSKQN---R 95
Query: 74 GGGGGYGWGWGWGGGGGGGGGG----------------------WWKWGCGGQPKSGRGG 133
GGGGGYGWGWG GGGGGGGGGG WWKWGCGGQPKSGR G
Sbjct: 96 GGGGGYGWGWGGGGGGGGGGGGGGGGGGGGGGGGGWGWGGGGGGWWKWGCGGQPKSGRRG 155
Query: 134 GGRRRGSGRNQNHVFRKRMYDEGDYKTGEFGQCVVRGRCRGMRLDCPLHCGGPCFYDCRY 172
GGRR+ +V RKR+Y+E DY GEF +C+V+GRCRGMRLDCPLHCGGPCFYDCRY
Sbjct: 156 GGRRK-------NVDRKRIYNEEDYSMGEFAECMVKGRCRGMRLDCPLHCGGPCFYDCRY 206
BLAST of MC11g0131 vs. NCBI nr
Match:
XP_022940700.1 (glycine-rich RNA-binding protein 2-like [Cucurbita moschata])
HSP 1 Score: 190 bits (483), Expect = 6.23e-58
Identity = 113/175 (64.57%), Postives = 124/175 (70.86%), Query Frame = 0
Query: 20 IYGSMADGLKNGTMRTNVTFLTFSE------GRNESSSNTTTTVEVSKQNGSGRGGGGGY 79
+YGS A+GLKNGT FLTFSE G +SS TTTVEVSKQN RGGGGGY
Sbjct: 54 VYGSRAEGLKNGT------FLTFSELPGGNAGEGRNSSGNTTTVEVSKQN---RGGGGGY 113
Query: 80 GWGWGWGGGGGGGGGG----------------WWKWGCGGQPKSGRGGGGRRRGSGRNQN 139
GWGWG GGGGGGGGGG WWKWGCGGQPKSGR GGGRR+
Sbjct: 114 GWGWGGGGGGGGGGGGGGGGGGGWGWGGGGGGWWKWGCGGQPKSGRRGGGRRK------- 173
Query: 140 HVFRKRMYDEGDYKTGEFGQCVVRGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCR 172
+V RKR+Y+E DY GEF +C+V+GRCRGMRLDCPLHCGGPCFYDCR+MCKAHCR
Sbjct: 174 NVDRKRIYNEEDYSLGEFAECMVKGRCRGMRLDCPLHCGGPCFYDCRHMCKAHCR 212
BLAST of MC11g0131 vs. NCBI nr
Match:
XP_008455258.1 (PREDICTED: keratin, type II cytoskeletal 1 [Cucumis melo])
HSP 1 Score: 189 bits (480), Expect = 1.01e-57
Identity = 121/197 (61.42%), Postives = 139/197 (70.56%), Query Frame = 0
Query: 1 MACQNLMKFCALAVVFAALIYGSMA-DGLKNGTMRTNVTFLTFSE------GRNESSSNT 60
M +N +K AL V+ A +IYGS A +GL NG+M NVTFLTFSE G +SS+
Sbjct: 1 MGWENPIKLSAL-VILATVIYGSRAAEGLGNGSMPINVTFLTFSELPQRNAGERRNSSSN 60
Query: 61 TTTVEVSKQNGSGRGGGGGYGWGWGWGGGGGGGGGG-------------------WWKWG 120
T+TVEVSKQNG G GGGGGYGWGWG GGGGGGGGGG WWKWG
Sbjct: 61 TSTVEVSKQNGGG-GGGGGYGWGWGSGGGGGGGGGGGGGGGGGGGGWGWGGGGGGWWKWG 120
Query: 121 CGGQPKSGRGGGGRRRGSGRNQNHVFRKRMYDEGDYKTGEFGQCVVRGRCRGMRLDCPLH 171
CGG+PK + GRR +GR +N V RK+MY+E DY+ GEF QC+V+GRCRGMRLDCPLH
Sbjct: 121 CGGRPKFEK--VGRRDDNGRRKN-VKRKKMYNEKDYRMGEFAQCMVKGRCRGMRLDCPLH 180
BLAST of MC11g0131 vs. NCBI nr
Match:
XP_011659711.1 (keratin, type II cytoskeletal 2 epidermal [Cucumis sativus] >KGN43666.1 hypothetical protein Csa_017107 [Cucumis sativus])
HSP 1 Score: 186 bits (472), Expect = 1.46e-56
Identity = 121/194 (62.37%), Postives = 136/194 (70.10%), Query Frame = 0
Query: 1 MACQNLMKFCALAVVFAALIYGSMA-DGLKNGTMRTNVTFLTFSE------GRNESSSNT 60
M +N +K AL V+ A +I GS A +GL NG+M NVTFLTFSE G +SS+
Sbjct: 1 MGWENPIKLSAL-VILATVISGSRAAEGLGNGSMPMNVTFLTFSELPQRNAGERRNSSSN 60
Query: 61 TTTVEVSKQNGSGRGGGGGYGWGWGWGGGGGGGGGG----------------WWKWGCGG 120
+TTVEVSKQNG G GGGGYGWGWG GGGGGGGGGG WWKWGCGG
Sbjct: 61 STTVEVSKQNGGG--GGGGYGWGWGSGGGGGGGGGGGGGGGGGWGWGGGGGGWWKWGCGG 120
Query: 121 QPKSGRGGGGRRRGSGRNQNHVFRKRMYDEGDYKTGEFGQCVVRGRCRGMRLDCPLHCGG 171
QPKS R GRR +G ++N V KRMY E DY+ GEF QC+V+GRCRGMRLDCPLHCGG
Sbjct: 121 QPKSER--VGRRDDNGGSRN-VKGKRMYSEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGG 180
BLAST of MC11g0131 vs. ExPASy TrEMBL
Match:
A0A6J1FRC8 (glycine-rich RNA-binding protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111446212 PE=4 SV=1)
HSP 1 Score: 190 bits (483), Expect = 3.01e-58
Identity = 113/175 (64.57%), Postives = 124/175 (70.86%), Query Frame = 0
Query: 20 IYGSMADGLKNGTMRTNVTFLTFSE------GRNESSSNTTTTVEVSKQNGSGRGGGGGY 79
+YGS A+GLKNGT FLTFSE G +SS TTTVEVSKQN RGGGGGY
Sbjct: 54 VYGSRAEGLKNGT------FLTFSELPGGNAGEGRNSSGNTTTVEVSKQN---RGGGGGY 113
Query: 80 GWGWGWGGGGGGGGGG----------------WWKWGCGGQPKSGRGGGGRRRGSGRNQN 139
GWGWG GGGGGGGGGG WWKWGCGGQPKSGR GGGRR+
Sbjct: 114 GWGWGGGGGGGGGGGGGGGGGGGWGWGGGGGGWWKWGCGGQPKSGRRGGGRRK------- 173
Query: 140 HVFRKRMYDEGDYKTGEFGQCVVRGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCR 172
+V RKR+Y+E DY GEF +C+V+GRCRGMRLDCPLHCGGPCFYDCR+MCKAHCR
Sbjct: 174 NVDRKRIYNEEDYSLGEFAECMVKGRCRGMRLDCPLHCGGPCFYDCRHMCKAHCR 212
BLAST of MC11g0131 vs. ExPASy TrEMBL
Match:
A0A1S3C029 (keratin, type II cytoskeletal 1 OS=Cucumis melo OX=3656 GN=LOC103495464 PE=4 SV=1)
HSP 1 Score: 189 bits (480), Expect = 4.89e-58
Identity = 121/197 (61.42%), Postives = 139/197 (70.56%), Query Frame = 0
Query: 1 MACQNLMKFCALAVVFAALIYGSMA-DGLKNGTMRTNVTFLTFSE------GRNESSSNT 60
M +N +K AL V+ A +IYGS A +GL NG+M NVTFLTFSE G +SS+
Sbjct: 1 MGWENPIKLSAL-VILATVIYGSRAAEGLGNGSMPINVTFLTFSELPQRNAGERRNSSSN 60
Query: 61 TTTVEVSKQNGSGRGGGGGYGWGWGWGGGGGGGGGG-------------------WWKWG 120
T+TVEVSKQNG G GGGGGYGWGWG GGGGGGGGGG WWKWG
Sbjct: 61 TSTVEVSKQNGGG-GGGGGYGWGWGSGGGGGGGGGGGGGGGGGGGGWGWGGGGGGWWKWG 120
Query: 121 CGGQPKSGRGGGGRRRGSGRNQNHVFRKRMYDEGDYKTGEFGQCVVRGRCRGMRLDCPLH 171
CGG+PK + GRR +GR +N V RK+MY+E DY+ GEF QC+V+GRCRGMRLDCPLH
Sbjct: 121 CGGRPKFEK--VGRRDDNGRRKN-VKRKKMYNEKDYRMGEFAQCMVKGRCRGMRLDCPLH 180
BLAST of MC11g0131 vs. ExPASy TrEMBL
Match:
A0A0A0K766 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G056450 PE=4 SV=1)
HSP 1 Score: 186 bits (472), Expect = 7.05e-57
Identity = 121/194 (62.37%), Postives = 136/194 (70.10%), Query Frame = 0
Query: 1 MACQNLMKFCALAVVFAALIYGSMA-DGLKNGTMRTNVTFLTFSE------GRNESSSNT 60
M +N +K AL V+ A +I GS A +GL NG+M NVTFLTFSE G +SS+
Sbjct: 1 MGWENPIKLSAL-VILATVISGSRAAEGLGNGSMPMNVTFLTFSELPQRNAGERRNSSSN 60
Query: 61 TTTVEVSKQNGSGRGGGGGYGWGWGWGGGGGGGGGG----------------WWKWGCGG 120
+TTVEVSKQNG G GGGGYGWGWG GGGGGGGGGG WWKWGCGG
Sbjct: 61 STTVEVSKQNGGG--GGGGYGWGWGSGGGGGGGGGGGGGGGGGWGWGGGGGGWWKWGCGG 120
Query: 121 QPKSGRGGGGRRRGSGRNQNHVFRKRMYDEGDYKTGEFGQCVVRGRCRGMRLDCPLHCGG 171
QPKS R GRR +G ++N V KRMY E DY+ GEF QC+V+GRCRGMRLDCPLHCGG
Sbjct: 121 QPKSER--VGRRDDNGGSRN-VKGKRMYSEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGG 180
BLAST of MC11g0131 vs. ExPASy TrEMBL
Match:
A0A5D2KXD0 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D05G207300v1 PE=4 SV=1)
HSP 1 Score: 141 bits (355), Expect = 5.78e-39
Identity = 84/114 (73.68%), Postives = 95/114 (83.33%), Query Frame = 0
Query: 64 GSGRGGGGGYGWGWGWGGGG---GGGGGGWWKWGCGGQPKSGRGGG-GRRRGS-GRNQNH 123
G G GGGGGYGWGWG GGGG GGGGGGW+KWGCGG+ K+G+G G GR +GS GRNQ H
Sbjct: 96 GGGGGGGGGYGWGWGGGGGGWGWGGGGGGWYKWGCGGR-KAGKGNGRGRDKGSIGRNQAH 155
Query: 124 VFRKRMYDEGDYKTGEFGQCVVRGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCR 172
RKR++++ DYK GEF QC VRGRCRGMRLDCPLHCGGPC YDC++MCKAHCR
Sbjct: 156 --RKRVFNKEDYKMGEFAQCTVRGRCRGMRLDCPLHCGGPCVYDCQHMCKAHCR 206
BLAST of MC11g0131 vs. ExPASy TrEMBL
Match:
A0A5J5RFA8 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_D05G197900v1 PE=4 SV=1)
HSP 1 Score: 140 bits (354), Expect = 8.41e-39
Identity = 84/115 (73.04%), Postives = 95/115 (82.61%), Query Frame = 0
Query: 64 GSGRGGGGGYGWGWGWGGGGG----GGGGGWWKWGCGGQPKSGRGGG-GRRRGS-GRNQN 123
G G GGGGGYGWGWG GGGGG GGGGGW+KWGCGG+ K+G+G G GR +GS GRNQ
Sbjct: 96 GGGGGGGGGYGWGWGGGGGGGWGWGGGGGGWYKWGCGGR-KAGKGNGRGRDKGSIGRNQA 155
Query: 124 HVFRKRMYDEGDYKTGEFGQCVVRGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCR 172
H RKR++++ DYK GEF QC VRGRCRGMRLDCPLHCGGPC YDC++MCKAHCR
Sbjct: 156 H--RKRVFNKEDYKMGEFAQCTVRGRCRGMRLDCPLHCGGPCVYDCQHMCKAHCR 207
BLAST of MC11g0131 vs. TAIR 10
Match:
AT1G75550.1 (glycine-rich protein )
HSP 1 Score: 81.3 bits (199), Expect = 8.6e-16
Identity = 76/180 (42.22%), Postives = 91/180 (50.56%), Query Frame = 0
Query: 7 MKFCALAVVFAALIYGSMADGLKNGTMRTNVTFLTFSEGRNESSSNTTTTVEVSKQNGSG 66
MK + VV LI + L +G R+N + N ++TTT V V + S
Sbjct: 1 MKTISSLVVIFLLILIFQTNKLVSGHDRSNDQDTV--KNNNNDENSTTTGVVVRDKKRSY 60
Query: 67 RGGGGGYGWGW----------GWGGGGGGGGGGWWKWGCGGQP----KSGRGGGGRRRGS 126
GG G Y WGW G GGGGGGGGGG W WG GG K G GGGG +G
Sbjct: 61 NGGSGSYRWGWGGGGGGGGGGGGGGGGGGGGGGGWGWGGGGGGGGWYKWGCGGGG--KGK 120
Query: 127 GRNQNHVFRKRMYDEGDYKTGEFGQCVVRGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCR 173
GR F KR E+ +C RG+C G RL+CP HCGG CFYDC ++CK HCR
Sbjct: 121 GREGRGEFVKR----------EYAECKGRGKCSGKRLECPQHCGGLCFYDCLFLCKPHCR 166
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAG6608571.1 | 1.83e-59 | 63.74 | hypothetical protein SDJN03_01913, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG7037889.1 | 1.02e-58 | 61.50 | hypothetical protein SDJN02_01520, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_022940700.1 | 6.23e-58 | 64.57 | glycine-rich RNA-binding protein 2-like [Cucurbita moschata] | [more] |
XP_008455258.1 | 1.01e-57 | 61.42 | PREDICTED: keratin, type II cytoskeletal 1 [Cucumis melo] | [more] |
XP_011659711.1 | 1.46e-56 | 62.37 | keratin, type II cytoskeletal 2 epidermal [Cucumis sativus] >KGN43666.1 hypothet... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1FRC8 | 3.01e-58 | 64.57 | glycine-rich RNA-binding protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC1114... | [more] |
A0A1S3C029 | 4.89e-58 | 61.42 | keratin, type II cytoskeletal 1 OS=Cucumis melo OX=3656 GN=LOC103495464 PE=4 SV=... | [more] |
A0A0A0K766 | 7.05e-57 | 62.37 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G056450 PE=4 SV=1 | [more] |
A0A5D2KXD0 | 5.78e-39 | 73.68 | Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D05G207300v1 P... | [more] |
A0A5J5RFA8 | 8.41e-39 | 73.04 | Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_D05G197900v1 PE... | [more] |
Match Name | E-value | Identity | Description | |
AT1G75550.1 | 8.6e-16 | 42.22 | glycine-rich protein | [more] |