MC11g0033 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC11g0033
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Late embryogenesis abundant protein, group 6
Location	MC11: 250819 .. 251109 (-)
RNA-Seq Expression	MC11g0033
Synteny	MC11g0033

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGAGCAGGCGCAGGCGCAGGTGCAGCCGCAGACGCGGACGATGGGGAAGAGGGAAGAAGAGAAGGCGTCGGTGGAGGAATTGCTGCCGCTGGAGAGCAGTCCGTACGTGAAATACAAAGACTTGGAAGAGTACAAAAGGGAAGGGTATGGGGCGGAGGGGCATCTGGAGCCGAAGCCCAACCAGGGGCAGGGCGGCGGCGGCACCGACGCCCCCACCTTGTCCGGCGCCGGCTTCCCGGAGGTCAAGCCCTCCACCATCGACGTCGCCACCAACCAAGGCCTCATCCCC

mRNA sequence

GAAGAGCAGGCGCAGGCGCAGGTGCAGCCGCAGACGCGGACGATGGGGAAGAGGGAAGAAGAGAAGGCGTCGGTGGAGGAATTGCTGCCGCTGGAGAGCAGTCCGTACGTGAAATACAAAGACTTGGAAGAGTACAAAAGGGAAGGGTATGGGGCGGAGGGGCATCTGGAGCCGAAGCCCAACCAGGGGCAGGGCGGCGGCGGCACCGACGCCCCCACCTTGTCCGGCGCCGGCTTCCCGGAGGTCAAGCCCTCCACCATCGACGTCGCCACCAACCAAGGCCTCATCCCC

Coding sequence (CDS)

GAAGAGCAGGCGCAGGCGCAGGTGCAGCCGCAGACGCGGACGATGGGGAAGAGGGAAGAAGAGAAGGCGTCGGTGGAGGAATTGCTGCCGCTGGAGAGCAGTCCGTACGTGAAATACAAAGACTTGGAAGAGTACAAAAGGGAAGGGTATGGGGCGGAGGGGCATCTGGAGCCGAAGCCCAACCAGGGGCAGGGCGGCGGCGGCACCGACGCCCCCACCTTGTCCGGCGCCGGCTTCCCGGAGGTCAAGCCCTCCACCATCGACGTCGCCACCAACCAAGGCCTCATCCCC

Protein sequence

EEQAQAQVQPQTRTMGKREEEKASVEELLPLESSPYVKYKDLEEYKREGYGAEGHLEPKPNQGQGGGGTDAPTLSGAGFPEVKPSTIDVATNQGLIP

Homology

[Close]

BLAST of MC11g0033 vs. NCBI nr
Match: XP_022135734.1 (uncharacterized protein LOC111007621 [Momordica charantia])

HSP 1 Score: 188 bits (477), Expect = 7.03e-60
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1   EEQAQAQVQPQTRTMGKREEEKASVEELLPLESSPYVKYKDLEEYKREGYGAEGHLEPKP 60
           EEQAQAQVQPQTRTMGKREEEKASVEELLPLESSPYVKYKDLEEYKREGYGAEGHLEPKP
Sbjct: 5   EEQAQAQVQPQTRTMGKREEEKASVEELLPLESSPYVKYKDLEEYKREGYGAEGHLEPKP 64

Query: 61  NQGQGGGGTDAPTLSGAGFPEVKPSTIDVATNQGLIP 97
           NQGQGGGGTDAPTLSGAGFPEVKPSTIDVATNQGLIP
Sbjct: 65  NQGQGGGGTDAPTLSGAGFPEVKPSTIDVATNQGLIP 101

[Close]

BLAST of MC11g0033 vs. NCBI nr
Match: XP_023535424.1 (uncharacterized protein LOC111796868 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 135 bits (341), Expect = 3.04e-39
Identity = 69/88 (78.41%), Postives = 77/88 (87.50%), Query Frame = 0


Query: 9  QPQTRTMGKREEEKASVEELLPLESSPYVKYKDLEEYKREGYGAEGHLEPKPNQGQGGGG 68
          Q Q + + + +EEKASVEELLPLESSPYVKYKDLEEYKR+GYGAEGHLEPKPNQG   GG
Sbjct: 8  QQQQQQLVREKEEKASVEELLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNQG---GG 67

Query: 69 TDAPTLSGAGFPEVKPSTIDVATNQGLI 96
          TDAPTLSG+GFPEVKP+TID  TN GL+
Sbjct: 68 TDAPTLSGSGFPEVKPATIDFVTNHGLL 92

[Close]

BLAST of MC11g0033 vs. NCBI nr
Match: XP_022937316.1 (uncharacterized protein LOC111443639 [Cucurbita moschata] >KAG6591201.1 hypothetical protein SDJN03_13547, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024086.1 hypothetical protein SDJN02_12899, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 133 bits (335), Expect = 2.49e-38
Identity = 68/88 (77.27%), Postives = 76/88 (86.36%), Query Frame = 0


Query: 9  QPQTRTMGKREEEKASVEELLPLESSPYVKYKDLEEYKREGYGAEGHLEPKPNQGQGGGG 68
          Q Q + + + +EEK SVEELLPLESSPYVKYKDLEEYKR+GYGAEGHLEPKPNQG   GG
Sbjct: 8  QQQQQQLVREKEEKDSVEELLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNQG---GG 67

Query: 69 TDAPTLSGAGFPEVKPSTIDVATNQGLI 96
          TDAPTLSG+GFPEVKP+TID  TN GL+
Sbjct: 68 TDAPTLSGSGFPEVKPATIDFVTNHGLL 92

[Close]

BLAST of MC11g0033 vs. NCBI nr
Match: KAA0064662.1 (late embryogenesis abundant protein group 8 protein [Cucumis melo var. makuwa] >TYK19929.1 late embryogenesis abundant protein group 8 protein [Cucumis melo var. makuwa])

HSP 1 Score: 132 bits (332), Expect = 6.16e-38
Identity = 70/88 (79.55%), Postives = 77/88 (87.50%), Query Frame = 0


Query: 9  QPQTRTMGKREEEKASVEELLPLESSPYVKYKDLEEYKREGYGAEGHLEPKPNQGQGGGG 68
          Q Q + MGK EE KA VE+LLPLESSPYVKYKDLEEYKR+GYGAEGHLEPKPNQG   GG
Sbjct: 4  QGQHQMMGKMEE-KAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNQG---GG 63

Query: 69 TDAPTLSGAGFPEVKPSTIDVATNQGLI 96
          TDAPTLSG+G+PEV+P+TIDV T QGLI
Sbjct: 64 TDAPTLSGSGYPEVQPTTIDVVTKQGLI 87

[Close]

BLAST of MC11g0033 vs. NCBI nr
Match: KAE8649966.1 (hypothetical protein Csa_012992 [Cucumis sativus])

HSP 1 Score: 126 bits (317), Expect = 1.30e-35
Identity = 67/88 (76.14%), Postives = 74/88 (84.09%), Query Frame = 0


Query: 9  QPQTRTMGKREEEKASVEELLPLESSPYVKYKDLEEYKREGYGAEGHLEPKPNQGQGGGG 68
          Q Q + MGK EE KA VE+LLPLESSPYVKYKDLEEYKR+GYG EGHL PKPNQG   GG
Sbjct: 7  QGQHQMMGKMEE-KAPVEDLLPLESSPYVKYKDLEEYKRKGYGVEGHLVPKPNQG---GG 66

Query: 69 TDAPTLSGAGFPEVKPSTIDVATNQGLI 96
          TDAPTLSG+G PEV+P+TID+ T QGLI
Sbjct: 67 TDAPTLSGSGLPEVQPTTIDIVTKQGLI 90

[Close]

BLAST of MC11g0033 vs. ExPASy TrEMBL
Match: A0A6J1C2A9 (uncharacterized protein LOC111007621 OS=Momordica charantia OX=3673 GN=LOC111007621 PE=4 SV=1)

HSP 1 Score: 188 bits (477), Expect = 3.40e-60
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1   EEQAQAQVQPQTRTMGKREEEKASVEELLPLESSPYVKYKDLEEYKREGYGAEGHLEPKP 60
           EEQAQAQVQPQTRTMGKREEEKASVEELLPLESSPYVKYKDLEEYKREGYGAEGHLEPKP
Sbjct: 5   EEQAQAQVQPQTRTMGKREEEKASVEELLPLESSPYVKYKDLEEYKREGYGAEGHLEPKP 64

Query: 61  NQGQGGGGTDAPTLSGAGFPEVKPSTIDVATNQGLIP 97
           NQGQGGGGTDAPTLSGAGFPEVKPSTIDVATNQGLIP
Sbjct: 65  NQGQGGGGTDAPTLSGAGFPEVKPSTIDVATNQGLIP 101

[Close]

BLAST of MC11g0033 vs. ExPASy TrEMBL
Match: A0A6J1FA12 (uncharacterized protein LOC111443639 OS=Cucurbita moschata OX=3662 GN=LOC111443639 PE=4 SV=1)

HSP 1 Score: 133 bits (335), Expect = 1.21e-38
Identity = 68/88 (77.27%), Postives = 76/88 (86.36%), Query Frame = 0


Query: 9  QPQTRTMGKREEEKASVEELLPLESSPYVKYKDLEEYKREGYGAEGHLEPKPNQGQGGGG 68
          Q Q + + + +EEK SVEELLPLESSPYVKYKDLEEYKR+GYGAEGHLEPKPNQG   GG
Sbjct: 8  QQQQQQLVREKEEKDSVEELLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNQG---GG 67

Query: 69 TDAPTLSGAGFPEVKPSTIDVATNQGLI 96
          TDAPTLSG+GFPEVKP+TID  TN GL+
Sbjct: 68 TDAPTLSGSGFPEVKPATIDFVTNHGLL 92

[Close]

BLAST of MC11g0033 vs. ExPASy TrEMBL
Match: A0A5A7V8I8 (Late embryogenesis abundant protein group 8 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G00410 PE=4 SV=1)

HSP 1 Score: 132 bits (332), Expect = 2.98e-38
Identity = 70/88 (79.55%), Postives = 77/88 (87.50%), Query Frame = 0


Query: 9  QPQTRTMGKREEEKASVEELLPLESSPYVKYKDLEEYKREGYGAEGHLEPKPNQGQGGGG 68
          Q Q + MGK EE KA VE+LLPLESSPYVKYKDLEEYKR+GYGAEGHLEPKPNQG   GG
Sbjct: 4  QGQHQMMGKMEE-KAPVEDLLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNQG---GG 63

Query: 69 TDAPTLSGAGFPEVKPSTIDVATNQGLI 96
          TDAPTLSG+G+PEV+P+TIDV T QGLI
Sbjct: 64 TDAPTLSGSGYPEVQPTTIDVVTKQGLI 87

[Close]

BLAST of MC11g0033 vs. ExPASy TrEMBL
Match: A0A0A0L5Y6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G664380 PE=4 SV=1)

HSP 1 Score: 124 bits (312), Expect = 2.42e-34
Identity = 62/77 (80.52%), Postives = 68/77 (88.31%), Query Frame = 0


Query: 20  EEKASVEELLPLESSPYVKYKDLEEYKREGYGAEGHLEPKPNQGQGGGGTDAPTLSGAGF 79
           EEKA VE+LLPLESSPYVKYKDLEEYKR+GYG EGHL PKPNQG   GGTDAPTLSG+G 
Sbjct: 81  EEKAPVEDLLPLESSPYVKYKDLEEYKRKGYGVEGHLVPKPNQG---GGTDAPTLSGSGL 140

Query: 80  PEVKPSTIDVATNQGLI 96
           PEV+P+TID+ T QGLI
Sbjct: 141 PEVQPTTIDIVTKQGLI 154

[Close]

BLAST of MC11g0033 vs. ExPASy TrEMBL
Match: A0A438ET15 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_005747 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 2.89e-23
Identity = 49/78 (62.82%), Postives = 57/78 (73.08%), Query Frame = 0


Query: 18 REEEKASVEELLPLESSPYVKYKDLEEYKREGYGAEGHLEPKPNQGQGGGGTDAPTLSGA 77
          R EEKAS    LP+ESSPY+KY DLE+YKR+GYG EGHLEPKPNQG  GGGTDAPTL+G 
Sbjct: 17 RAEEKASKLRGLPMESSPYLKYTDLEDYKRQGYGTEGHLEPKPNQG--GGGTDAPTLAGT 76

Query: 78 GFPEVKPSTIDVATNQGL 95
             +   S +D A   G+
Sbjct: 77 DLSKGPASVVDAAHRVGI 92

[Close]

BLAST of MC11g0033 vs. TAIR 10
Match: AT2G33690.1 (Late embryogenesis abundant protein, group 6 )

HSP 1 Score: 67.0 bits (162), Expect = 9.5e-12
Identity = 36/72 (50.00%), Postives = 47/72 (65.28%), Query Frame = 0


Query: 22 KASVEELLPLESSPYVKYKDLEEYKREGYGAEGHLEPKPNQGQGGGGTDAPTLSGAGFPE 81
          K+  ++ LPLE+SPY KY+D+E+YK+  YG  GH + KP  G GGG TDAPT SG    +
Sbjct: 3  KSEEKQELPLETSPYTKYEDIEDYKKNAYGTSGHQDVKP--GHGGGTTDAPTPSG----D 62

Query: 82 VKPSTIDVATNQ 94
            PS ID A  +
Sbjct: 63 AAPSAIDSANQK 68

[Close]

BLAST of MC11g0033 vs. TAIR 10
Match: AT2G23110.1 (Late embryogenesis abundant protein, group 6 )

HSP 1 Score: 55.1 bits (131), Expect = 3.7e-08
Identity = 37/94 (39.36%), Postives = 50/94 (53.19%), Query Frame = 0


Query: 7  QVQPQTRTMGKREEEKASVEELLPLESSPYVKYKDLEEYKREGYGAEGHLEPKPNQGQGG 66
          Q +P T     +E +   +E +     +PY+ Y +LE+YK +GYGA+GH EPK   G GG
Sbjct: 4  QKKPPTTEQEVKEVKNDDLESI----KTPYLDYDNLEDYKMKGYGAQGHQEPK--LGMGG 63

Query: 67 GGTDAPTLS-----GAGFPEVKPSTIDVATNQGL 96
          G TDAPT S     G G      S+ D    QG+
Sbjct: 64 GATDAPTPSGGLGRGGGAASTDLSSTDAINRQGV 91

[Close]

BLAST of MC11g0033 vs. TAIR 10
Match: AT2G23110.2 (Late embryogenesis abundant protein, group 6 )

HSP 1 Score: 55.1 bits (131), Expect = 3.7e-08
Identity = 37/94 (39.36%), Postives = 50/94 (53.19%), Query Frame = 0


Query: 7  QVQPQTRTMGKREEEKASVEELLPLESSPYVKYKDLEEYKREGYGAEGHLEPKPNQGQGG 66
          Q +P T     +E +   +E +     +PY+ Y +LE+YK +GYGA+GH EPK   G GG
Sbjct: 4  QKKPPTTEQEVKEVKNDDLESI----KTPYLDYDNLEDYKMKGYGAQGHQEPK--LGMGG 63

Query: 67 GGTDAPTLS-----GAGFPEVKPSTIDVATNQGL 96
          G TDAPT S     G G      S+ D    QG+
Sbjct: 64 GATDAPTPSGGLGRGGGAASTDLSSTDAINRQGV 91

[Close]

BLAST of MC11g0033 vs. TAIR 10
Match: AT2G23120.1 (Late embryogenesis abundant protein, group 6 )

HSP 1 Score: 49.7 bits (117), Expect = 1.6e-06
Identity = 33/67 (49.25%), Postives = 42/67 (62.69%), Query Frame = 0


Query: 10 PQTRTMGKREEEKASVEELLPLESSPYVKYKDLEEYKREGYGAEGHLEPKPNQGQGGGGT 69
          P T T  +++ E+    + LP + SPY+    LE+YK + YGAEGH EP P  G GGG T
Sbjct: 8  PTTTTTTEKKTEQVKDND-LPTD-SPYMATGTLEDYKLKAYGAEGHQEPTP--GLGGGST 67

Query: 70 DAPTLSG 77
          DAPT SG
Sbjct: 68 DAPTPSG 70

The following BLAST results are available for this feature:

BLAST of MC11g0033 vs.


Match Name	E-value	Identity	Description

BLAST of MC11g0033 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135734.1	7.03e-60	100.00	uncharacterized protein LOC111007621 [Momordica charantia]	[more]
XP_023535424.1	3.04e-39	78.41	uncharacterized protein LOC111796868 [Cucurbita pepo subsp. pepo]	[more]
XP_022937316.1	2.49e-38	77.27	uncharacterized protein LOC111443639 [Cucurbita moschata] >KAG6591201.1 hypothet...	[more]
KAA0064662.1	6.16e-38	79.55	late embryogenesis abundant protein group 8 protein [Cucumis melo var. makuwa] >...	[more]
KAE8649966.1	1.30e-35	76.14	hypothetical protein Csa_012992 [Cucumis sativus]	[more]

BLAST of MC11g0033 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C2A9	3.40e-60	100.00	uncharacterized protein LOC111007621 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A6J1FA12	1.21e-38	77.27	uncharacterized protein LOC111443639 OS=Cucurbita moschata OX=3662 GN=LOC1114436...	[more]
A0A5A7V8I8	2.98e-38	79.55	Late embryogenesis abundant protein group 8 protein OS=Cucumis melo var. makuwa ...	[more]
A0A0A0L5Y6	2.42e-34	80.52	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G664380 PE=4 SV=1	[more]
A0A438ET15	2.89e-23	62.82	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_005747 PE=4 SV=1	[more]

BLAST of MC11g0033 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G33690.1	9.5e-12	50.00	Late embryogenesis abundant protein, group 6	[more]
AT2G23110.1	3.7e-08	39.36	Late embryogenesis abundant protein, group 6	[more]
AT2G23110.2	3.7e-08	39.36	Late embryogenesis abundant protein, group 6	[more]
AT2G23120.1	1.6e-06	49.25	Late embryogenesis abundant protein, group 6	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018930	Late embryogenesis abundant protein, LEA-18	PFAM	PF10714	LEA_6	coord: 21..95 e-value: 5.0E-29 score: 100.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34
None	No IPR available	PANTHER	PTHR33922:SF15	SUBFAMILY NOT NAMED	coord: 16..96
None	No IPR available	PANTHER	PTHR33922	OS01G0888066 PROTEIN-RELATED	coord: 16..96

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC11g0033.1	MC11g0033.1	mRNA