Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCAGAGGGATCCTCCCCTGCGAATTCGGTGGCGGCGGCGGCAGCAGCGACGGCGGCCTCCACGGCGGCGAGTCTTGCAGCGCTTCCAACAAAAAATCGAAGTACGACGTCGGAGACATTTTCTTCGGTAGCGATGATATGAAAGAATTCGTATGGGACGGTGTTTTCACTGAAGAAACAGATCGATTTCTGGAAAGAGAGTCCGCCATGAAAGCTCTGAGAAAGAAAAGCAAGAGAAGGCTACAAACATTTGATTGCTTCGAGTTCTTGAAACTCGTCTGGTGTTTCAAATTA
mRNA sequence
ATGGCCAGAGGGATCCTCCCCTGCGAATTCGGTGGCGGCGGCGGCAGCAGCGACGGCGGCCTCCACGGCGGCGAGTCTTGCAGCGCTTCCAACAAAAAATCGAAGTACGACGTCGGAGACATTTTCTTCGGTAGCGATGATATGAAAGAATTCGTATGGGACGGTGTTTTCACTGAAGAAACAGATCGATTTCTGGAAAGAGAGTCCGCCATGAAAGCTCTGAGAAAGAAAAGCAAGAGAAGGCTACAAACATTTGATTGCTTCGAGTTCTTGAAACTCGTCTGGTGTTTCAAATTA
Coding sequence (CDS)
ATGGCCAGAGGGATCCTCCCCTGCGAATTCGGTGGCGGCGGCGGCAGCAGCGACGGCGGCCTCCACGGCGGCGAGTCTTGCAGCGCTTCCAACAAAAAATCGAAGTACGACGTCGGAGACATTTTCTTCGGTAGCGATGATATGAAAGAATTCGTATGGGACGGTGTTTTCACTGAAGAAACAGATCGATTTCTGGAAAGAGAGTCCGCCATGAAAGCTCTGAGAAAGAAAAGCAAGAGAAGGCTACAAACATTTGATTGCTTCGAGTTCTTGAAACTCGTCTGGTGTTTCAAATTA
Protein sequence
MARGILPCEFGGGGGSSDGGLHGGESCSASNKKSKYDVGDIFFGSDDMKEFVWDGVFTEETDRFLERESAMKALRKKSKRRLQTFDCFEFLKLVWCFKL
Homology
BLAST of MC10g0216 vs. NCBI nr
Match:
KAG6576802.1 (hypothetical protein SDJN03_24376, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014829.1 hypothetical protein SDJN02_22458, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 115 bits (288), Expect = 3.48e-31
Identity = 65/98 (66.33%), Postives = 73/98 (74.49%), Query Frame = 0
Query: 1 MARGILPCEFGGGGGSSDGGLHGGESCSASNKKSKYDV-GDIFFGSDDMKEFVWDGVFTE 60
MAR LP EFG GGG G+SCS+ SKYDV GDIFFG DDMK +VWD VFTE
Sbjct: 1 MARDTLPYEFGVGGG--------GKSCSS---PSKYDVVGDIFFGKDDMKGYVWDEVFTE 60
Query: 61 ETDRFLERESAMKALRKKSKRRLQTFDCFEFLKLVWCF 97
ET RFLE ESA++ LRK+SKRRL+TF CFEFLK +WCF
Sbjct: 61 ETVRFLETESAVEVLRKRSKRRLETFKCFEFLKFLWCF 87
BLAST of MC10g0216 vs. NCBI nr
Match:
KGN57263.1 (hypothetical protein Csa_009618 [Cucumis sativus])
HSP 1 Score: 110 bits (276), Expect = 1.92e-29
Identity = 60/99 (60.61%), Postives = 70/99 (70.71%), Query Frame = 0
Query: 1 MARGILPCEFGGGG-GSSDGGLHGGESCSASNKKSKYDVGDIFFGSDDMKEFVWDGVFTE 60
MAR ILP EFGGGG G S+ G GDIFFG DDMKE+ WDGV+TE
Sbjct: 1 MARDILPFEFGGGGAGESERG------------------GDIFFGKDDMKEYAWDGVYTE 60
Query: 61 ETDRFLERESAMKALRKKSKRRLQTFDCFEFLKLVWCFK 98
ET RF+E ESA KALRK+S+R+L+ F+CFEFLK+VWCFK
Sbjct: 61 ETVRFIETESAKKALRKRSRRKLEPFNCFEFLKIVWCFK 81
BLAST of MC10g0216 vs. NCBI nr
Match:
KAA0067665.1 (hypothetical protein E6C27_scaffold70G00340 [Cucumis melo var. makuwa] >TYK23669.1 hypothetical protein E5676_scaffold577G00350 [Cucumis melo var. makuwa])
HSP 1 Score: 102 bits (253), Expect = 6.09e-26
Identity = 57/98 (58.16%), Postives = 68/98 (69.39%), Query Frame = 0
Query: 1 MARGILPCEFGGGGGSSDGGLHGGESCSASNKKSKYDVGDIFFGSDDMKEFVWDGVFTEE 60
MAR ILP EFGGGGG GES GD+FFG DDMKE+ WDGV+TEE
Sbjct: 1 MARDILPFEFGGGGG--------GESERG---------GDVFFGKDDMKEYAWDGVYTEE 60
Query: 61 TDRFLERESAMKALRKKSKRRLQTFDCFEFLKLVWCFK 98
T RF+E ESA KALRK+S+R+L+ F+CFEFL++V FK
Sbjct: 61 TVRFIETESAKKALRKRSRRKLEPFNCFEFLRIVCSFK 81
BLAST of MC10g0216 vs. NCBI nr
Match:
KAG6600176.1 (hypothetical protein SDJN03_05409, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 69.3 bits (168), Expect = 1.39e-11
Identity = 41/67 (61.19%), Postives = 46/67 (68.66%), Query Frame = 0
Query: 1 MARGILPCEFGGGGGSSDGGLHGGESCSASNKKSKYDV-GDIFFGSDDMKEFVWDGVFTE 60
MA P EFGG G DGG G+SCS + SKYDV GDIFFG DDMKE+ WDG FTE
Sbjct: 1 MAIDTTPFEFGGDG---DGGRRCGKSCS---RPSKYDVVGDIFFGKDDMKEYAWDGAFTE 60
Query: 61 ETDRFLE 66
+T RF+E
Sbjct: 61 KTVRFIE 61
BLAST of MC10g0216 vs. NCBI nr
Match:
KAG7030840.1 (hypothetical protein SDJN02_04877, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 69.3 bits (168), Expect = 2.34e-11
Identity = 41/67 (61.19%), Postives = 46/67 (68.66%), Query Frame = 0
Query: 1 MARGILPCEFGGGGGSSDGGLHGGESCSASNKKSKYDV-GDIFFGSDDMKEFVWDGVFTE 60
MA P EFGG G DGG G+SCS + SKYDV GDIFFG DDMKE+ WDG FTE
Sbjct: 1 MAIDTTPFEFGGDG---DGGRRCGKSCS---RPSKYDVVGDIFFGKDDMKEYAWDGAFTE 60
Query: 61 ETDRFLE 66
+T RF+E
Sbjct: 61 KTVRFIE 61
BLAST of MC10g0216 vs. ExPASy TrEMBL
Match:
A0A0A0L658 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G175640 PE=4 SV=1)
HSP 1 Score: 110 bits (276), Expect = 9.28e-30
Identity = 60/99 (60.61%), Postives = 70/99 (70.71%), Query Frame = 0
Query: 1 MARGILPCEFGGGG-GSSDGGLHGGESCSASNKKSKYDVGDIFFGSDDMKEFVWDGVFTE 60
MAR ILP EFGGGG G S+ G GDIFFG DDMKE+ WDGV+TE
Sbjct: 1 MARDILPFEFGGGGAGESERG------------------GDIFFGKDDMKEYAWDGVYTE 60
Query: 61 ETDRFLERESAMKALRKKSKRRLQTFDCFEFLKLVWCFK 98
ET RF+E ESA KALRK+S+R+L+ F+CFEFLK+VWCFK
Sbjct: 61 ETVRFIETESAKKALRKRSRRKLEPFNCFEFLKIVWCFK 81
BLAST of MC10g0216 vs. ExPASy TrEMBL
Match:
A0A5D3DK72 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold577G00350 PE=4 SV=1)
HSP 1 Score: 102 bits (253), Expect = 2.95e-26
Identity = 57/98 (58.16%), Postives = 68/98 (69.39%), Query Frame = 0
Query: 1 MARGILPCEFGGGGGSSDGGLHGGESCSASNKKSKYDVGDIFFGSDDMKEFVWDGVFTEE 60
MAR ILP EFGGGGG GES GD+FFG DDMKE+ WDGV+TEE
Sbjct: 1 MARDILPFEFGGGGG--------GESERG---------GDVFFGKDDMKEYAWDGVYTEE 60
Query: 61 TDRFLERESAMKALRKKSKRRLQTFDCFEFLKLVWCFK 98
T RF+E ESA KALRK+S+R+L+ F+CFEFL++V FK
Sbjct: 61 TVRFIETESAKKALRKRSRRKLEPFNCFEFLRIVCSFK 81
BLAST of MC10g0216 vs. ExPASy TrEMBL
Match:
A0A7J7DBE1 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW08G00189 PE=4 SV=1)
HSP 1 Score: 55.8 bits (133), Expect = 7.95e-08
Identity = 39/107 (36.45%), Postives = 58/107 (54.21%), Query Frame = 0
Query: 1 MARGILPCE-----FGGGGGSSDGGLHGGESCSASNKKSK----YDVGDIFFGSDDMKEF 60
MARG+ C+ GG SS L E S + SK YDVGD+FFG+DD+ +
Sbjct: 1 MARGVTSCDEAGATAAGGNVSSSTALF--EPTSDFRESSKSYMDYDVGDVFFGTDDLAD- 60
Query: 61 VWDGVFTEETDRFLERESAMKALRKKSKRRLQTFDCFEFLKLVWCFK 98
D ++ E+ R+ A+K ++++ KR +CFEFLKL+ C +
Sbjct: 61 TRDFLYKEDVIESYRRDRALKLVKRRDKRSSSIAECFEFLKLILCIR 104
BLAST of MC10g0216 vs. ExPASy TrEMBL
Match:
A0A061FZA7 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_014918 PE=4 SV=1)
HSP 1 Score: 52.8 bits (125), Expect = 1.68e-06
Identity = 28/60 (46.67%), Postives = 44/60 (73.33%), Query Frame = 0
Query: 38 VGDIFFGSDDMKEFVWDGVFTEETDRFLERESAMKALRKKSKRR-LQTFDCFEFLKLVWC 96
VGD+FFG+DD+++ D ++ E+ RE+A+K+LR++SK+R + TF C EFLKL+ C
Sbjct: 54 VGDVFFGTDDIRD-TRDSMYKEDVMESYCRETAIKSLRRQSKKRSISTFGCVEFLKLLRC 112
BLAST of MC10g0216 vs. ExPASy TrEMBL
Match:
A0A7J7CAB1 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW19G00667 PE=4 SV=1)
HSP 1 Score: 52.0 bits (123), Expect = 2.84e-06
Identity = 38/111 (34.23%), Postives = 58/111 (52.25%), Query Frame = 0
Query: 1 MARGILPCEFGGGGGSSDGGLHGG--------ESCSASNKKSK----YDVGDIFFGSDDM 60
M RG+ E GGG DG L+ E S K SK +DVGD+FFG+DD+
Sbjct: 1 MGRGVTCDEAAAGGGGGDGSLYTEVSSSTVVFEDMSDFRKSSKSYRDHDVGDVFFGTDDI 60
Query: 61 KEFVWDGVFTEETDRFLERESAMKALRKKSKRRLQTF-DCFEFLKLVWCFK 98
+ D ++ E+ R+ A+K+ +K+ K+R CF+FL L++C +
Sbjct: 61 AD-TRDLLYKEDVLESYRRDEALKSSKKRQKKRCSLIAQCFQFLNLMFCIR 110
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAG6576802.1 | 3.48e-31 | 66.33 | hypothetical protein SDJN03_24376, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KGN57263.1 | 1.92e-29 | 60.61 | hypothetical protein Csa_009618 [Cucumis sativus] | [more] |
KAA0067665.1 | 6.09e-26 | 58.16 | hypothetical protein E6C27_scaffold70G00340 [Cucumis melo var. makuwa] >TYK23669... | [more] |
KAG6600176.1 | 1.39e-11 | 61.19 | hypothetical protein SDJN03_05409, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG7030840.1 | 2.34e-11 | 61.19 | hypothetical protein SDJN02_04877, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0L658 | 9.28e-30 | 60.61 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G175640 PE=4 SV=1 | [more] |
A0A5D3DK72 | 2.95e-26 | 58.16 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A7J7DBE1 | 7.95e-08 | 36.45 | Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW08G00189 ... | [more] |
A0A061FZA7 | 1.68e-06 | 46.67 | Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_014918 PE=4 SV=1 | [more] |
A0A7J7CAB1 | 2.84e-06 | 34.23 | Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW19G00667 ... | [more] |
Match Name | E-value | Identity | Description | |