MC10g0216 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC10g0216
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC10: 1586378 .. 1586674 (+)
RNA-Seq ExpressionMC10g0216
SyntenyMC10g0216
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCAGAGGGATCCTCCCCTGCGAATTCGGTGGCGGCGGCGGCAGCAGCGACGGCGGCCTCCACGGCGGCGAGTCTTGCAGCGCTTCCAACAAAAAATCGAAGTACGACGTCGGAGACATTTTCTTCGGTAGCGATGATATGAAAGAATTCGTATGGGACGGTGTTTTCACTGAAGAAACAGATCGATTTCTGGAAAGAGAGTCCGCCATGAAAGCTCTGAGAAAGAAAAGCAAGAGAAGGCTACAAACATTTGATTGCTTCGAGTTCTTGAAACTCGTCTGGTGTTTCAAATTA

mRNA sequence

ATGGCCAGAGGGATCCTCCCCTGCGAATTCGGTGGCGGCGGCGGCAGCAGCGACGGCGGCCTCCACGGCGGCGAGTCTTGCAGCGCTTCCAACAAAAAATCGAAGTACGACGTCGGAGACATTTTCTTCGGTAGCGATGATATGAAAGAATTCGTATGGGACGGTGTTTTCACTGAAGAAACAGATCGATTTCTGGAAAGAGAGTCCGCCATGAAAGCTCTGAGAAAGAAAAGCAAGAGAAGGCTACAAACATTTGATTGCTTCGAGTTCTTGAAACTCGTCTGGTGTTTCAAATTA

Coding sequence (CDS)

ATGGCCAGAGGGATCCTCCCCTGCGAATTCGGTGGCGGCGGCGGCAGCAGCGACGGCGGCCTCCACGGCGGCGAGTCTTGCAGCGCTTCCAACAAAAAATCGAAGTACGACGTCGGAGACATTTTCTTCGGTAGCGATGATATGAAAGAATTCGTATGGGACGGTGTTTTCACTGAAGAAACAGATCGATTTCTGGAAAGAGAGTCCGCCATGAAAGCTCTGAGAAAGAAAAGCAAGAGAAGGCTACAAACATTTGATTGCTTCGAGTTCTTGAAACTCGTCTGGTGTTTCAAATTA

Protein sequence

MARGILPCEFGGGGGSSDGGLHGGESCSASNKKSKYDVGDIFFGSDDMKEFVWDGVFTEETDRFLERESAMKALRKKSKRRLQTFDCFEFLKLVWCFKL
Homology
BLAST of MC10g0216 vs. NCBI nr
Match: KAG6576802.1 (hypothetical protein SDJN03_24376, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014829.1 hypothetical protein SDJN02_22458, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 115 bits (288), Expect = 3.48e-31
Identity = 65/98 (66.33%), Postives = 73/98 (74.49%), Query Frame = 0

Query: 1  MARGILPCEFGGGGGSSDGGLHGGESCSASNKKSKYDV-GDIFFGSDDMKEFVWDGVFTE 60
          MAR  LP EFG GGG        G+SCS+    SKYDV GDIFFG DDMK +VWD VFTE
Sbjct: 1  MARDTLPYEFGVGGG--------GKSCSS---PSKYDVVGDIFFGKDDMKGYVWDEVFTE 60

Query: 61 ETDRFLERESAMKALRKKSKRRLQTFDCFEFLKLVWCF 97
          ET RFLE ESA++ LRK+SKRRL+TF CFEFLK +WCF
Sbjct: 61 ETVRFLETESAVEVLRKRSKRRLETFKCFEFLKFLWCF 87

BLAST of MC10g0216 vs. NCBI nr
Match: KGN57263.1 (hypothetical protein Csa_009618 [Cucumis sativus])

HSP 1 Score: 110 bits (276), Expect = 1.92e-29
Identity = 60/99 (60.61%), Postives = 70/99 (70.71%), Query Frame = 0

Query: 1  MARGILPCEFGGGG-GSSDGGLHGGESCSASNKKSKYDVGDIFFGSDDMKEFVWDGVFTE 60
          MAR ILP EFGGGG G S+ G                  GDIFFG DDMKE+ WDGV+TE
Sbjct: 1  MARDILPFEFGGGGAGESERG------------------GDIFFGKDDMKEYAWDGVYTE 60

Query: 61 ETDRFLERESAMKALRKKSKRRLQTFDCFEFLKLVWCFK 98
          ET RF+E ESA KALRK+S+R+L+ F+CFEFLK+VWCFK
Sbjct: 61 ETVRFIETESAKKALRKRSRRKLEPFNCFEFLKIVWCFK 81

BLAST of MC10g0216 vs. NCBI nr
Match: KAA0067665.1 (hypothetical protein E6C27_scaffold70G00340 [Cucumis melo var. makuwa] >TYK23669.1 hypothetical protein E5676_scaffold577G00350 [Cucumis melo var. makuwa])

HSP 1 Score: 102 bits (253), Expect = 6.09e-26
Identity = 57/98 (58.16%), Postives = 68/98 (69.39%), Query Frame = 0

Query: 1  MARGILPCEFGGGGGSSDGGLHGGESCSASNKKSKYDVGDIFFGSDDMKEFVWDGVFTEE 60
          MAR ILP EFGGGGG        GES            GD+FFG DDMKE+ WDGV+TEE
Sbjct: 1  MARDILPFEFGGGGG--------GESERG---------GDVFFGKDDMKEYAWDGVYTEE 60

Query: 61 TDRFLERESAMKALRKKSKRRLQTFDCFEFLKLVWCFK 98
          T RF+E ESA KALRK+S+R+L+ F+CFEFL++V  FK
Sbjct: 61 TVRFIETESAKKALRKRSRRKLEPFNCFEFLRIVCSFK 81

BLAST of MC10g0216 vs. NCBI nr
Match: KAG6600176.1 (hypothetical protein SDJN03_05409, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 69.3 bits (168), Expect = 1.39e-11
Identity = 41/67 (61.19%), Postives = 46/67 (68.66%), Query Frame = 0

Query: 1  MARGILPCEFGGGGGSSDGGLHGGESCSASNKKSKYDV-GDIFFGSDDMKEFVWDGVFTE 60
          MA    P EFGG G   DGG   G+SCS   + SKYDV GDIFFG DDMKE+ WDG FTE
Sbjct: 1  MAIDTTPFEFGGDG---DGGRRCGKSCS---RPSKYDVVGDIFFGKDDMKEYAWDGAFTE 60

Query: 61 ETDRFLE 66
          +T RF+E
Sbjct: 61 KTVRFIE 61

BLAST of MC10g0216 vs. NCBI nr
Match: KAG7030840.1 (hypothetical protein SDJN02_04877, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 69.3 bits (168), Expect = 2.34e-11
Identity = 41/67 (61.19%), Postives = 46/67 (68.66%), Query Frame = 0

Query: 1  MARGILPCEFGGGGGSSDGGLHGGESCSASNKKSKYDV-GDIFFGSDDMKEFVWDGVFTE 60
          MA    P EFGG G   DGG   G+SCS   + SKYDV GDIFFG DDMKE+ WDG FTE
Sbjct: 1  MAIDTTPFEFGGDG---DGGRRCGKSCS---RPSKYDVVGDIFFGKDDMKEYAWDGAFTE 60

Query: 61 ETDRFLE 66
          +T RF+E
Sbjct: 61 KTVRFIE 61

BLAST of MC10g0216 vs. ExPASy TrEMBL
Match: A0A0A0L658 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G175640 PE=4 SV=1)

HSP 1 Score: 110 bits (276), Expect = 9.28e-30
Identity = 60/99 (60.61%), Postives = 70/99 (70.71%), Query Frame = 0

Query: 1  MARGILPCEFGGGG-GSSDGGLHGGESCSASNKKSKYDVGDIFFGSDDMKEFVWDGVFTE 60
          MAR ILP EFGGGG G S+ G                  GDIFFG DDMKE+ WDGV+TE
Sbjct: 1  MARDILPFEFGGGGAGESERG------------------GDIFFGKDDMKEYAWDGVYTE 60

Query: 61 ETDRFLERESAMKALRKKSKRRLQTFDCFEFLKLVWCFK 98
          ET RF+E ESA KALRK+S+R+L+ F+CFEFLK+VWCFK
Sbjct: 61 ETVRFIETESAKKALRKRSRRKLEPFNCFEFLKIVWCFK 81

BLAST of MC10g0216 vs. ExPASy TrEMBL
Match: A0A5D3DK72 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold577G00350 PE=4 SV=1)

HSP 1 Score: 102 bits (253), Expect = 2.95e-26
Identity = 57/98 (58.16%), Postives = 68/98 (69.39%), Query Frame = 0

Query: 1  MARGILPCEFGGGGGSSDGGLHGGESCSASNKKSKYDVGDIFFGSDDMKEFVWDGVFTEE 60
          MAR ILP EFGGGGG        GES            GD+FFG DDMKE+ WDGV+TEE
Sbjct: 1  MARDILPFEFGGGGG--------GESERG---------GDVFFGKDDMKEYAWDGVYTEE 60

Query: 61 TDRFLERESAMKALRKKSKRRLQTFDCFEFLKLVWCFK 98
          T RF+E ESA KALRK+S+R+L+ F+CFEFL++V  FK
Sbjct: 61 TVRFIETESAKKALRKRSRRKLEPFNCFEFLRIVCSFK 81

BLAST of MC10g0216 vs. ExPASy TrEMBL
Match: A0A7J7DBE1 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW08G00189 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 7.95e-08
Identity = 39/107 (36.45%), Postives = 58/107 (54.21%), Query Frame = 0

Query: 1   MARGILPCE-----FGGGGGSSDGGLHGGESCSASNKKSK----YDVGDIFFGSDDMKEF 60
           MARG+  C+       GG  SS   L   E  S   + SK    YDVGD+FFG+DD+ + 
Sbjct: 1   MARGVTSCDEAGATAAGGNVSSSTALF--EPTSDFRESSKSYMDYDVGDVFFGTDDLAD- 60

Query: 61  VWDGVFTEETDRFLERESAMKALRKKSKRRLQTFDCFEFLKLVWCFK 98
             D ++ E+      R+ A+K ++++ KR     +CFEFLKL+ C +
Sbjct: 61  TRDFLYKEDVIESYRRDRALKLVKRRDKRSSSIAECFEFLKLILCIR 104

BLAST of MC10g0216 vs. ExPASy TrEMBL
Match: A0A061FZA7 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_014918 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 1.68e-06
Identity = 28/60 (46.67%), Postives = 44/60 (73.33%), Query Frame = 0

Query: 38  VGDIFFGSDDMKEFVWDGVFTEETDRFLERESAMKALRKKSKRR-LQTFDCFEFLKLVWC 96
           VGD+FFG+DD+++   D ++ E+      RE+A+K+LR++SK+R + TF C EFLKL+ C
Sbjct: 54  VGDVFFGTDDIRD-TRDSMYKEDVMESYCRETAIKSLRRQSKKRSISTFGCVEFLKLLRC 112

BLAST of MC10g0216 vs. ExPASy TrEMBL
Match: A0A7J7CAB1 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW19G00667 PE=4 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 2.84e-06
Identity = 38/111 (34.23%), Postives = 58/111 (52.25%), Query Frame = 0

Query: 1   MARGILPCEFGGGGGSSDGGLHGG--------ESCSASNKKSK----YDVGDIFFGSDDM 60
           M RG+   E   GGG  DG L+          E  S   K SK    +DVGD+FFG+DD+
Sbjct: 1   MGRGVTCDEAAAGGGGGDGSLYTEVSSSTVVFEDMSDFRKSSKSYRDHDVGDVFFGTDDI 60

Query: 61  KEFVWDGVFTEETDRFLERESAMKALRKKSKRRLQTF-DCFEFLKLVWCFK 98
            +   D ++ E+      R+ A+K+ +K+ K+R      CF+FL L++C +
Sbjct: 61  AD-TRDLLYKEDVLESYRRDEALKSSKKRQKKRCSLIAQCFQFLNLMFCIR 110

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6576802.13.48e-3166.33hypothetical protein SDJN03_24376, partial [Cucurbita argyrosperma subsp. sorori... [more]
KGN57263.11.92e-2960.61hypothetical protein Csa_009618 [Cucumis sativus][more]
KAA0067665.16.09e-2658.16hypothetical protein E6C27_scaffold70G00340 [Cucumis melo var. makuwa] >TYK23669... [more]
KAG6600176.11.39e-1161.19hypothetical protein SDJN03_05409, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7030840.12.34e-1161.19hypothetical protein SDJN02_04877, partial [Cucurbita argyrosperma subsp. argyro... [more]
Match NameE-valueIdentityDescription
A0A0A0L6589.28e-3060.61Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G175640 PE=4 SV=1[more]
A0A5D3DK722.95e-2658.16Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A7J7DBE17.95e-0836.45Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW08G00189 ... [more]
A0A061FZA71.68e-0646.67Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_014918 PE=4 SV=1[more]
A0A7J7CAB12.84e-0634.23Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW19G00667 ... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..32

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC10g0216.1MC10g0216.1mRNA