Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTCCCGTGACTTTGTTGATGACGACTGCATCAAAGCCGACGAAGGAAGTCATTCGCCGAAGAAAGAAGCTCAGTGGAAGAGGAATGGGGGAGGAGATAAAGAGAGAGAGCGAGGGTGAGCGAGAGAGCGAGATCGAGGGTGAGCGAGAGAGCGAGATCGAGGGTGAGCGAGAGAGCGAGATCGAGGGTGAGCGAGAGAGCGAGATCGAGGGTGAGCGAGAGAGCGAGATCGAGGGTGAGCGAGAGAGCGAGATCGAGGGTGAGCGAGAGAGCGAGATCGAGGGTGAGCGAGAGAGCGAGATCGAGGGTGAGCGAGAGAGCGAGATCGAGGGTGAGCGAGAGAGCGAGATCGAGGGTGAGCGAGAGAGATCGAGGGAATCTAAAAATAATATTTTTAATGAGATTGTTTTTTTTATCGTATCTAAAAATTAATTTTGAATTAATGTTCATCAAATCAAATTAATTTTGAGAAAAACGAAATCTCAATATTAATTCAAATTGTTTCCCGAAATCTCTCATCAATCTCAGTTTTAATTATAATTGAATTTCAAATCCCCCAATTTTGCTTTCCCATATTTCATTCCTAATTTAGATTTTAATCAAATGTATCAATTTAAAATCTAATTAAAATGAGGGGTTTTTAATTCAATCCTAATTAAAACTACGTTGACAGATTTAATGAGATTGGGAATAGATTTCGGGAAACAAATTTGAATTAATATTGAGATATTATTTTTAGATTCCCTCAATTCTCGCTCAACCTCGCTCTCTCGTTCAACCTCGCTCTCTCGCTCAACCTCGCTCTCTCGCTCAACCTCGCTCCCCCATTCCTCTTCCACTGATCTTCTTTCTTCGGCGAACGACCTCCTTCGTCGGCTTTGA
mRNA sequence
ATGGTTCCCGTGACTTTGTTGATGACGACTGCATCAAAGCCGACGAAGGAAGTCATTCGCCGAAGAAAGAAGCTCAGTGGAAGAGGAATGGGGGAGGAGATAAAGAGAGAGAGCGAGGGTGAGCGAGAGAGCGAGATCGAGGGTGAGCGAGAGAGCGAGATCGAGGGTGAGCGAGAGAGCGAGATCGAGGGTGAGCGAGAGAGCGAGATCGAGGGTGAGCGAGAGAGCGAGATCGAGGGTGAGCGAGAGAGCGAGATCGAGGGTGAGCGAGAGAGCGAGATCGAGGGTGAGCGAGAGAGCGAGATCGAGGGTGAGCGAGAGAGCGAGATCGAGGGTGAGCGAGAGAGCGAGATCGAGGATTCCCTCAATTCTCGCTCAACCTCGCTCTCTCGTTCAACCTCGCTCTCTCGCTCAACCTCGCTCTCTCGCTCAACCTCGCTCCCCCATTCCTCTTCCACTGATCTTCTTTCTTCGGCGAACGACCTCCTTCGTCGGCTTTGA
Coding sequence (CDS)
ATGGTTCCCGTGACTTTGTTGATGACGACTGCATCAAAGCCGACGAAGGAAGTCATTCGCCGAAGAAAGAAGCTCAGTGGAAGAGGAATGGGGGAGGAGATAAAGAGAGAGAGCGAGGGTGAGCGAGAGAGCGAGATCGAGGGTGAGCGAGAGAGCGAGATCGAGGGTGAGCGAGAGAGCGAGATCGAGGGTGAGCGAGAGAGCGAGATCGAGGGTGAGCGAGAGAGCGAGATCGAGGGTGAGCGAGAGAGCGAGATCGAGGGTGAGCGAGAGAGCGAGATCGAGGGTGAGCGAGAGAGCGAGATCGAGGGTGAGCGAGAGAGCGAGATCGAGGGTGAGCGAGAGAGCGAGATCGAGGATTCCCTCAATTCTCGCTCAACCTCGCTCTCTCGTTCAACCTCGCTCTCTCGCTCAACCTCGCTCTCTCGCTCAACCTCGCTCCCCCATTCCTCTTCCACTGATCTTCTTTCTTCGGCGAACGACCTCCTTCGTCGGCTTTGA
Protein sequence
MVPVTLLMTTASKPTKEVIRRRKKLSGRGMGEEIKRESEGERESEIEGERESEIEGERESEIEGERESEIEGERESEIEGERESEIEGERESEIEGERESEIEGERESEIEGERESEIEDSLNSRSTSLSRSTSLSRSTSLSRSTSLPHSSSTDLLSSANDLLRRL
Homology
BLAST of MC09g_new0215 vs. NCBI nr
Match:
XP_041043271.1 (retinitis pigmentosa 1-like 1 protein, partial [Carcharodon carcharias])
HSP 1 Score: 79.0 bits (193), Expect = 1.04e-13
Identity = 62/83 (74.70%), Postives = 63/83 (75.90%), Query Frame = 0
Query: 37 ESEGERESEIEGERESEIEGERESEIEGERESEIEGERESEIEGERESEIEGERESEIEG 96
E+EGERE E EGERE E EGERE E EGERE E EGERE E EGERE E EGERE E EG
Sbjct: 288 EAEGEREPEAEGEREPEAEGEREPEAEGEREPEAEGEREPEAEGEREPEAEGEREPEAEG 347
Query: 97 ERESEIEGERESEIEGERESEIE 119
ERE E EGERE E EGERE E E
Sbjct: 348 EREPEAEGEREPEAEGEREPEAE 370
BLAST of MC09g_new0215 vs. NCBI nr
Match:
NLN93923.1 (formylglycine-generating enzyme family protein [Candidatus Hydrogenedens sp.])
HSP 1 Score: 71.2 bits (173), Expect = 6.91e-11
Identity = 53/87 (60.92%), Postives = 65/87 (74.71%), Query Frame = 0
Query: 33 EIKRESEGERESEIEGERESEIEGERESEIEGERESEIEGERESEIEGERESEIEGERES 92
E++ E EGE E E+EGE E E+EGE E E+EGE E E+EGE E E+EGE E E+EGE E
Sbjct: 426 EVEGEVEGEAEGEVEGEVEGEVEGEAEGEVEGEVEGEVEGEVEGEVEGEVEGEVEGEVEG 485
Query: 93 EIEGERESEIEGERESEIEGERESEIE 119
E+EGE E E+EGE E E+EGE E E+E
Sbjct: 486 EVEGEAEGEVEGEVEGEVEGEAEGEVE 512
BLAST of MC09g_new0215 vs. NCBI nr
Match:
OQC07888.1 (Chitinase A precursor [Candidatus Hydrogenedentes bacterium ADurb.Bin101])
HSP 1 Score: 66.6 bits (161), Expect = 3.13e-09
Identity = 57/98 (58.16%), Postives = 67/98 (68.37%), Query Frame = 0
Query: 25 LSGRGMGE---EIKRESEGERESEIEGERESEIEGERESEIEGERESEIEGERESEIEGE 84
L G GE E++ E+EGE E E+EGE E E+EGE E E EGE E E+EGE E E EGE
Sbjct: 278 LEGEPEGEPEGELEGEAEGEPEGELEGEFEGEVEGELEGEPEGESEGELEGEAEGEPEGE 337
Query: 85 RESEIEGERESEIEGERESEIEGERESEIEGERESEIE 119
E E+EGE E E+EGE E E+EGE E E EGE E E+E
Sbjct: 338 HEGEVEGEAEGEVEGEPEGELEGEPEGESEGEFEGELE 375
BLAST of MC09g_new0215 vs. NCBI nr
Match:
MBR2384352.1 (hypothetical protein [Clostridia bacterium])
HSP 1 Score: 65.1 bits (157), Expect = 4.76e-09
Identity = 62/100 (62.00%), Postives = 71/100 (71.00%), Query Frame = 0
Query: 33 EIKRESEGERESEIEGERESEIEGERESEIEGERESEIEGERESEIEGERESEIEGERES 92
E++ E E E ESE+E E ESEIE E ESE+E E ESE+E E ESE+E E ESE+E E ES
Sbjct: 76 EVESEVESEVESEVESEVESEIESEIESEVESEIESEVESEIESEVESEVESEVESEIES 135
Query: 93 EIEGERESEIEGERESEIEGERESEIEDSLNSRSTSLSRS 132
EIE E ESEIE E ESE+E E ESEIE + S S S S S
Sbjct: 136 EIESEVESEIESEIESEVESEIESEIESEIESESESESES 175
BLAST of MC09g_new0215 vs. NCBI nr
Match:
XP_029921522.1 (uncharacterized protein LOC115369109 isoform X36 [Myripristis murdjan])
HSP 1 Score: 65.5 bits (158), Expect = 7.74e-09
Identity = 52/90 (57.78%), Postives = 68/90 (75.56%), Query Frame = 0
Query: 33 EIKRESEGERESEIEGERESEIEGERESEIEGERESEIEGERESEIEGERESEIEGERES 92
E + E+EGERE+E EGE E+E EGE E+E EGE E+E EGE E+E EGE E+E EGE E+
Sbjct: 857 ETEAEAEGEREAEAEGETEAEAEGETEAEAEGETETEAEGETEAEAEGETEAEAEGETET 916
Query: 93 EIEGERESEIEGERESEIEGERESEIEDSL 122
+ EGE E+E EGE ++E EGE E++ ED +
Sbjct: 917 DAEGETEAEAEGETDAEAEGETETDAEDEM 946
BLAST of MC09g_new0215 vs. ExPASy TrEMBL
Match:
A0A4W3GJG6 (Uncharacterized protein OS=Callorhinchus milii OX=7868 PE=4 SV=1)
HSP 1 Score: 74.3 bits (181), Expect = 2.07e-12
Identity = 62/83 (74.70%), Postives = 62/83 (74.70%), Query Frame = 0
Query: 37 ESEGERESEIEGERESEIEGERESEIEGERESEIEGERESEIEGERESEIEGERESEIEG 96
E EGERE E EGERE E EGERE E EGERE E EGERE E EGERE E EGERE E EG
Sbjct: 91 EREGEREGEREGEREGEREGEREGEREGEREGEREGEREGEREGEREGEREGEREGEREG 150
Query: 97 ERESEIEGERESEIEGERESEIE 119
ERE E EGERE E EGERE E E
Sbjct: 151 EREGEREGEREGEREGEREGERE 173
BLAST of MC09g_new0215 vs. ExPASy TrEMBL
Match:
A0A1V6F2P5 (Chitinase A OS=Candidatus Hydrogenedentes bacterium ADurb.Bin101 OX=1852847 GN=chiA PE=4 SV=1)
HSP 1 Score: 66.6 bits (161), Expect = 1.51e-09
Identity = 57/98 (58.16%), Postives = 67/98 (68.37%), Query Frame = 0
Query: 25 LSGRGMGE---EIKRESEGERESEIEGERESEIEGERESEIEGERESEIEGERESEIEGE 84
L G GE E++ E+EGE E E+EGE E E+EGE E E EGE E E+EGE E E EGE
Sbjct: 278 LEGEPEGEPEGELEGEAEGEPEGELEGEFEGEVEGELEGEPEGESEGELEGEAEGEPEGE 337
Query: 85 RESEIEGERESEIEGERESEIEGERESEIEGERESEIE 119
E E+EGE E E+EGE E E+EGE E E EGE E E+E
Sbjct: 338 HEGEVEGEAEGEVEGEPEGELEGEPEGESEGEFEGELE 375
BLAST of MC09g_new0215 vs. ExPASy TrEMBL
Match:
A0A1C3KCX8 (Uncharacterized protein (Fragment) OS=Plasmodium malariae OX=5858 GN=PmlGA01_090036800 PE=4 SV=1)
HSP 1 Score: 63.5 bits (153), Expect = 1.82e-08
Identity = 54/87 (62.07%), Postives = 67/87 (77.01%), Query Frame = 0
Query: 33 EIKRESEGERESEIEGERESEIEGERESEIEGERESEIEGERESEIEGERESEIEGERES 92
EI+RE+E +RE +IE ER+ EIE ER+ EIE ER+ EIE ER+ EIE ER+ EIE ER+
Sbjct: 2411 EIERENESKRERDIENERKREIENERKREIESERKREIESERKREIESERKREIENERKR 2470
Query: 93 EIEGERESEIEGERESEIEGERESEIE 119
EIE ER+ EIE ER+ EIE ER+ EIE
Sbjct: 2471 EIENERKREIENERKREIENERKREIE 2497
BLAST of MC09g_new0215 vs. ExPASy TrEMBL
Match:
R7VRD0 (Sodium/potassium/calcium exchanger 1 OS=Columba livia OX=8932 GN=A306_07628 PE=4 SV=1)
HSP 1 Score: 63.2 bits (152), Expect = 2.32e-08
Identity = 52/83 (62.65%), Postives = 62/83 (74.70%), Query Frame = 0
Query: 37 ESEGERESEIEGERESEIEGERESEIEGERESEIEGERESEIEGERESEIEGERESEIEG 96
E EGE+E E EGE+E E EGE+E E EGE+E E EGE+E E EGE+E E EGE+E E EG
Sbjct: 969 EKEGEKEGEKEGEKEGEKEGEKEGEKEGEKEGEKEGEKEGEKEGEKEGEKEGEKEGEKEG 1028
Query: 97 ERESEIEGERESEIEGERESEIE 119
E+E E EGE+E E EGE+E E E
Sbjct: 1029 EKEGEKEGEKEGEKEGEKEGEKE 1051
BLAST of MC09g_new0215 vs. ExPASy TrEMBL
Match:
A0A401RHG7 (Uncharacterized protein OS=Chiloscyllium punctatum OX=137246 GN=chiPu_0022299 PE=4 SV=1)
HSP 1 Score: 62.4 bits (150), Expect = 2.80e-08
Identity = 52/92 (56.52%), Postives = 66/92 (71.74%), Query Frame = 0
Query: 28 RGMGEEIKRESEGERESEIEGERESEIEGERESEIEGERESEIEGERESEIEGERESEIE 87
R +E +RE E RE E EGERE E EGERE E EGERE E +GER+ E +GERE E E
Sbjct: 6 RECAKECERERESVREGEREGEREGEHEGEREGEREGEREGERDGERDGERDGEREGERE 65
Query: 88 GERESEIEGERESEIEGERESEIEGERESEIE 119
GER+ E +GER+ E +GER+ E +GER+ E++
Sbjct: 66 GERDGERDGERDGERDGERDGERDGERDGELD 97
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_041043271.1 | 1.04e-13 | 74.70 | retinitis pigmentosa 1-like 1 protein, partial [Carcharodon carcharias] | [more] |
NLN93923.1 | 6.91e-11 | 60.92 | formylglycine-generating enzyme family protein [Candidatus Hydrogenedens sp.] | [more] |
OQC07888.1 | 3.13e-09 | 58.16 | Chitinase A precursor [Candidatus Hydrogenedentes bacterium ADurb.Bin101] | [more] |
MBR2384352.1 | 4.76e-09 | 62.00 | hypothetical protein [Clostridia bacterium] | [more] |
XP_029921522.1 | 7.74e-09 | 57.78 | uncharacterized protein LOC115369109 isoform X36 [Myripristis murdjan] | [more] |
Match Name | E-value | Identity | Description | |
A0A4W3GJG6 | 2.07e-12 | 74.70 | Uncharacterized protein OS=Callorhinchus milii OX=7868 PE=4 SV=1 | [more] |
A0A1V6F2P5 | 1.51e-09 | 58.16 | Chitinase A OS=Candidatus Hydrogenedentes bacterium ADurb.Bin101 OX=1852847 GN=c... | [more] |
A0A1C3KCX8 | 1.82e-08 | 62.07 | Uncharacterized protein (Fragment) OS=Plasmodium malariae OX=5858 GN=PmlGA01_090... | [more] |
R7VRD0 | 2.32e-08 | 62.65 | Sodium/potassium/calcium exchanger 1 OS=Columba livia OX=8932 GN=A306_07628 PE=4... | [more] |
A0A401RHG7 | 2.80e-08 | 56.52 | Uncharacterized protein OS=Chiloscyllium punctatum OX=137246 GN=chiPu_0022299 PE... | [more] |
Match Name | E-value | Identity | Description | |