MC09g1515 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC09g1515
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRibulose bisphosphate carboxylase small subunit
LocationMC09: 20970910 .. 20972794 (-)
RNA-Seq ExpressionMC09g1515
SyntenyMC09g1515
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTACAATGTGTGGTGTTTTATACGCGAAATTGGGCCGGTCTTTCTTCCATGAAGCCTAGTATTGGGCTTATGATCGCTGCTCAATACCCGAGCCCTAAAAGCTGAGGCTTAACTGTAGATAGGACTCTCGTAGCCTCCCAATGAGCGGGCCTCTGATCACGGATCTGGGCCATCTGGCATCCTCTCTCTCTCTCTCTTTCTCGCTGTCATAATGTCAGTGGTCCACGTAGTGAAGCGTATTTTGGTGACGTGGCTAGTAGAGTTCATTTAGACCCACTCCACTAAACACAATTAAATTAACACAGAGAGCAAACTCAGAAAACAAATCACCAAAACGACGATAAAAAAAAAATCGAATTAAATTAACCCCAAATATAATTCTGAATTTATTTTGTGTGTGTGTAAAGTATTTGAGTTGAGGCGACTGGTGAGTGTGGAAATTGGGAGGCCCATTCTTGATTGCTGTTGGGTTGGGTGTGAAGGAGATAAGGGTAATGGGCAGGTGCCACGTGGCGGAAGGAGAGGGTGGTTGTGGAAGCGATAAGGTTTCGTCGACTATGTGGCCATTAGAAGCGTGACATGATCTTTAAATCGAAAATAATGTCCAAGTTTTTTACCAGCTGAATTTACGACCACTGAATTGGTTGGGGGTTTTGGATAAAAGGGGGAAGAGGTGGAGAAGCGTTGGAGGGGAAGGAGATTGGGATTATAAATAGGGGACCATCTCACAGTGCAAGGCCTCTCAAGCTCAACAACAACAGCGCCCTTACTACTCTACTACCTAACTAGCAGCTTCTAGTAATCAACAAGAGGGGCAAATGGCTTCCTCCTCAATTGTCTCATCCGCGGCCGTTGCCTCCGTCAACCGCGCCTCCCCTGCTCAGGCTAGTATGGTGGCACCCTTCACTGGCCTCAAATCCGCCGCCGCCTTCCCCGTCACCCGCAAGACCAACGACATCACCACCCTCGCCAACAACGGCGGGAGAGTTCAGTGCATGAAGGTACGCACACAACTCTTCAACTAACACACATTTCTTTTTTGATTTGATTAATTGAATATTGGGGGGAAAAAAAACAAAAAAAACAGGTGTGGCCTCCACTTGGAAAGAAGAAGTTCGAGACTCTGTCGTACCTGCCTGATATGACCGAAACTCAGTTGTTGAAGGAAATTGACTACCTGATCCGGTCTGGGTGGATCCCCTGCATTGAGTTCGAGCTGGAGGTAGTGTTCTTTTTTTTAGAATGAATAATTTTTTAGTAGACGATGGGATTTTGAATAAGATGTAAATTGGTGGTTGCAGCATGGATTCGTGTACCGTGAGCACCACAAGTCACCAGGGTACTACGATGGGCGCTACTGGACCATGTGGAAGCTGCCCATGTACGGCTGCACAGACGCGTCTCAGGTGGTCAAGGAGATCGAGGAGGCCAAGAAGGAATACCCCAGCGCATTCATCAGGGTCATTGGCTTCGACAACAAGCGCCAAGTGCAGTGCATCAGTTTCATTGTCTACAAGCCATCAAGCTACTAAGTCTCGCCTCTTCGTTTCGCTTCCATTGGGCTTCAACAACATTTGAATTTTTTTTCTTCTCTTCATTTTACCGTTTTGGTTTGTCTCTTCAACCTATGTTTATTTCCCGGACTTTCCAATTCGAATTGGAATAAAATGATGCTTTGATTTCTCCTTCAATCTAATGCAATCATGTTCCCTGCTTTCGCCCAATTATTATGCATTCATCAAATGTTCAATTTTCTTTTTTTTCCAATTCCGTTTCTGTGTGTGCTCGAGAATGGAGATTCATTGCCGAATGCCGATAACGATAAGGTTCAATTTCAGCCAATCAACCGCTGCCTTTATGATATTCCTTTTTTTATATATATAT

mRNA sequence

CTTACAATGTGTGGTGTTTTATACGCGAAATTGGGCCGGTCTTTCTTCCATGAAGCCTAGTATTGGGCTTATGATCGCTGCTCAATACCCGAGCCCTAAAAGCTGAGGCTTAACTGTAGATAGGACTCTCGTAGCCTCCCAATGAGCGGGCCTCTGATCACGGATCTGGGCCATCTGGCATCCTCTCTCTCTCTCTCTTTCTCGCTGTCATAATGTCAGTGGTCCACGTAGTGAAGCGTATTTTGGTGACGTGGCTAGTAGAGTTCATTTAGACCCACTCCACTAAACACAATTAAATTAACACAGAGAGCAAACTCAGAAAACAAATCACCAAAACGACGATAAAAAAAAAATCGAATTAAATTAACCCCAAATATAATTCTGAATTTATTTTGTGTGTGTGTAAAGTATTTGAGTTGAGGCGACTGGTGAGTGTGGAAATTGGGAGGCCCATTCTTGATTGCTGTTGGGTTGGGTGTGAAGGAGATAAGGGTAATGGGCAGGTGCCACGTGGCGGAAGGAGAGGGTGGTTGTGGAAGCGATAAGGTTTCGTCGACTATGTGGCCATTAGAAGCGTGACATGATCTTTAAATCGAAAATAATGTCCAAGTTTTTTACCAGCTGAATTTACGACCACTGAATTGGTTGGGGGTTTTGGATAAAAGGGGGAAGAGGTGGAGAAGCGTTGGAGGGGAAGGAGATTGGGATTATAAATAGGGGACCATCTCACAGTGCAAGGCCTCTCAAGCTCAACAACAACAGCGCCCTTACTACTCTACTACCTAACTAGCAGCTTCTAGTAATCAACAAGAGGGGCAAATGGCTTCCTCCTCAATTGTCTCATCCGCGGCCGTTGCCTCCGTCAACCGCGCCTCCCCTGCTCAGGCTAGTATGGTGGCACCCTTCACTGGCCTCAAATCCGCCGCCGCCTTCCCCGTCACCCGCAAGACCAACGACATCACCACCCTCGCCAACAACGGCGGGAGAGTTCAGTGCATGAAGGTGTGGCCTCCACTTGGAAAGAAGAAGTTCGAGACTCTGTCGTACCTGCCTGATATGACCGAAACTCAGTTGTTGAAGGAAATTGACTACCTGATCCGGTCTGGGTGGATCCCCTGCATTGAGTTCGAGCTGGAGCATGGATTCGTGTACCGTGAGCACCACAAGTCACCAGGGTACTACGATGGGCGCTACTGGACCATGTGGAAGCTGCCCATGTACGGCTGCACAGACGCGTCTCAGGTGGTCAAGGAGATCGAGGAGGCCAAGAAGGAATACCCCAGCGCATTCATCAGGGTCATTGGCTTCGACAACAAGCGCCAAGTGCAGTGCATCAGTTTCATTGTCTACAAGCCATCAAGCTACTAAGTCTCGCCTCTTCGTTTCGCTTCCATTGGGCTTCAACAACATTTGAATTTTTTTTCTTCTCTTCATTTTACCGTTTTGGTTTGTCTCTTCAACCTATGTTTATTTCCCGGACTTTCCAATTCGAATTGGAATAAAATGATGCTTTGATTTCTCCTTCAATCTAATGCAATCATGTTCCCTGCTTTCGCCCAATTATTATGCATTCATCAAATGTTCAATTTTCTTTTTTTTCCAATTCCGTTTCTGTGTGTGCTCGAGAATGGAGATTCATTGCCGAATGCCGATAACGATAAGGTTCAATTTCAGCCAATCAACCGCTGCCTTTATGATATTCCTTTTTTTATATATATAT

Coding sequence (CDS)

ATGGCTTCCTCCTCAATTGTCTCATCCGCGGCCGTTGCCTCCGTCAACCGCGCCTCCCCTGCTCAGGCTAGTATGGTGGCACCCTTCACTGGCCTCAAATCCGCCGCCGCCTTCCCCGTCACCCGCAAGACCAACGACATCACCACCCTCGCCAACAACGGCGGGAGAGTTCAGTGCATGAAGGTGTGGCCTCCACTTGGAAAGAAGAAGTTCGAGACTCTGTCGTACCTGCCTGATATGACCGAAACTCAGTTGTTGAAGGAAATTGACTACCTGATCCGGTCTGGGTGGATCCCCTGCATTGAGTTCGAGCTGGAGCATGGATTCGTGTACCGTGAGCACCACAAGTCACCAGGGTACTACGATGGGCGCTACTGGACCATGTGGAAGCTGCCCATGTACGGCTGCACAGACGCGTCTCAGGTGGTCAAGGAGATCGAGGAGGCCAAGAAGGAATACCCCAGCGCATTCATCAGGGTCATTGGCTTCGACAACAAGCGCCAAGTGCAGTGCATCAGTTTCATTGTCTACAAGCCATCAAGCTACTAA

Protein sequence

MASSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRKTNDITTLANNGGRVQCMKVWPPLGKKKFETLSYLPDMTETQLLKEIDYLIRSGWIPCIEFELEHGFVYREHHKSPGYYDGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSSY
Homology
[Close]
BLAST of MC09g1515 vs. ExPASy Swiss-Prot
Match: P08474 (Ribulose bisphosphate carboxylase small subunit, chloroplastic OS=Cucumis sativus OX=3659 GN=RBCS PE=2 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 6.0e-81
Identity = 142/178 (79.78%), Postives = 163/178 (91.57%), Query Frame = 0 

Query: 3   SSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRKTN-DITTLANNGGRVQCMK 62
           +SSI+SSAAVASVN ASPAQASMVAPFTGLKS+A FP+TRK N DITTLA+N G+VQCMK
Sbjct: 2   ASSILSSAAVASVNSASPAQASMVAPFTGLKSSAGFPITRKNNVDITTLASNAGKVQCMK 61

Query: 63  VWPPLGKKKFETLSYLPDMTETQLLKEIDYLIRSGWIPCIEFELEHGFVYREHHKSPGYY 122
           VWPPLG +KFETLSYLPDM+  QL KE DYL+R+GW+PC+EF++  GFVYRE+H+SPG+Y
Sbjct: 62  VWPPLGLRKFETLSYLPDMSNEQLSKECDYLLRNGWVPCVEFDIGSGFVYRENHRSPGFY 121

Query: 123 DGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKP 180
           DGRYWTMWKLPM+GCTD+SQV++EIEEAKKEYP AFIRVIGFDN RQVQCISFI YKP
Sbjct: 122 DGRYWTMWKLPMFGCTDSSQVIQEIEEAKKEYPDAFIRVIGFDNVRQVQCISFIAYKP 179

[Close]
BLAST of MC09g1515 vs. ExPASy Swiss-Prot
Match: P16032 (Ribulose bisphosphate carboxylase small subunit, chloroplastic 1 OS=Mesembryanthemum crystallinum OX=3544 GN=RBCS1 PE=2 SV=2)

HSP 1 Score: 298.1 bits (762), Expect = 6.7e-80
Identity = 139/180 (77.22%), Postives = 160/180 (88.89%), Query Frame = 0 

Query: 3   SSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRKTNDITTLANNGGRVQCMKV 62
           +SS+VSSAAVA+VNR +PAQASMVAPF GLKS AAFPVT+K NDIT++A NGGRVQCM+V
Sbjct: 2   ASSMVSSAAVATVNR-TPAQASMVAPFNGLKSVAAFPVTKKNNDITSVATNGGRVQCMQV 61

Query: 63  WPPLGKKKFETLSYLPDMTETQLLKEIDYLIRSGWIPCIEFELEHGFVYREHHKSPGYYD 122
           WPPLGKKKFETLSYLP ++E  L+KE+ YL+ +GW+PC+EFE  HGFVYREH  +PGYYD
Sbjct: 62  WPPLGKKKFETLSYLPPLSEESLMKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYD 121

Query: 123 GRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSSY 182
           GRYWTMWKLPM+GCTD SQVV E+EEAKK YP AFIR+IGFDN RQVQCISFI YKP+SY
Sbjct: 122 GRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRIIGFDNVRQVQCISFIAYKPASY 180

[Close]
BLAST of MC09g1515 vs. ExPASy Swiss-Prot
Match: P10798 (Ribulose bisphosphate carboxylase small subunit 3B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RBCS-3B PE=1 SV=2)

HSP 1 Score: 295.8 bits (756), Expect = 3.3e-79
Identity = 137/181 (75.69%), Postives = 164/181 (90.61%), Query Frame = 0 

Query: 3   SSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRKTN-DITTLANNGGRVQCMK 62
           +SS++SSAAV +    SPAQA+MVAPFTGLKS+AAFPVTRKTN DIT++A+NGGRV CMK
Sbjct: 2   ASSMLSSAAVVT----SPAQATMVAPFTGLKSSAAFPVTRKTNKDITSIASNGGRVSCMK 61

Query: 63  VWPPLGKKKFETLSYLPDMTETQLLKEIDYLIRSGWIPCIEFELEHGFVYREHHKSPGYY 122
           VWPP+GKKKFETLSYLPD+++ +L KE+DYL+R+ WIPC+EFELEHGFVYREH  +PGYY
Sbjct: 62  VWPPIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYY 121

Query: 123 DGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSS 182
           DGRYWTMWKLP++GCTD++QV+KE+EE KKEYP AFIR+IGFDN RQVQCISFI YKP S
Sbjct: 122 DGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPPS 178

[Close]
BLAST of MC09g1515 vs. ExPASy Swiss-Prot
Match: P10796 (Ribulose bisphosphate carboxylase small subunit 1B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RBCS-1B PE=1 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 2.8e-78
Identity = 135/181 (74.59%), Postives = 162/181 (89.50%), Query Frame = 0 

Query: 3   SSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRK-TNDITTLANNGGRVQCMK 62
           +SS++SSAAV +    SPAQA+MVAPFTGLKS+A+FPVTRK  NDIT++ +NGGRV CMK
Sbjct: 2   ASSMLSSAAVVT----SPAQATMVAPFTGLKSSASFPVTRKANNDITSITSNGGRVSCMK 61

Query: 63  VWPPLGKKKFETLSYLPDMTETQLLKEIDYLIRSGWIPCIEFELEHGFVYREHHKSPGYY 122
           VWPP+GKKKFETLSYLPD+T+ +L KE+DYL+R+ WIPC+EFELEHGFVYREH  +PGYY
Sbjct: 62  VWPPIGKKKFETLSYLPDLTDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYY 121

Query: 123 DGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSS 182
           DGRYWTMWKLP++GCTD++QV+KE+EE KKEYP AFIR+IGFDN RQVQCISFI YKP S
Sbjct: 122 DGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPPS 178

[Close]
BLAST of MC09g1515 vs. ExPASy Swiss-Prot
Match: P27985 (Ribulose bisphosphate carboxylase small subunit, chloroplastic 2 OS=Brassica napus OX=3708 GN=RBCS2 PE=3 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 3.7e-78
Identity = 136/181 (75.14%), Postives = 163/181 (90.06%), Query Frame = 0 

Query: 3   SSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRK-TNDITTLANNGGRVQCMK 62
           +SS++SSAAV +    SPAQA+MVAPFTGLKS+AAFPVTRK  NDIT++A+NGGRV CMK
Sbjct: 2   ASSMLSSAAVVT----SPAQATMVAPFTGLKSSAAFPVTRKANNDITSIASNGGRVSCMK 61

Query: 63  VWPPLGKKKFETLSYLPDMTETQLLKEIDYLIRSGWIPCIEFELEHGFVYREHHKSPGYY 122
           VWPP+GKKKFETLSYLPD+TE +L KE+DYL+R+ WIPC+EFELEHGFVYREH  +PGYY
Sbjct: 62  VWPPVGKKKFETLSYLPDLTEVELGKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYY 121

Query: 123 DGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSS 182
           DGRYWTMWKLP++GCTD++QV+KE++E K EYP+AFIR+IGFDN RQVQCISFI YKP S
Sbjct: 122 DGRYWTMWKLPLFGCTDSAQVLKEVQECKTEYPNAFIRIIGFDNNRQVQCISFIAYKPPS 178

[Close]
BLAST of MC09g1515 vs. NCBI nr
Match: XP_022150468.1 (ribulose bisphosphate carboxylase small chain, chloroplastic-like [Momordica charantia])

HSP 1 Score: 367 bits (943), Expect = 2.99e-128
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0 

Query: 1   MASSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRKTNDITTLANNGGRVQCM 60
           MASSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRKTNDITTLANNGGRVQCM
Sbjct: 1   MASSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRKTNDITTLANNGGRVQCM 60

Query: 61  KVWPPLGKKKFETLSYLPDMTETQLLKEIDYLIRSGWIPCIEFELEHGFVYREHHKSPGY 120
           KVWPPLGKKKFETLSYLPDMTETQLLKEIDYLIRSGWIPCIEFELEHGFVYREHHKSPGY
Sbjct: 61  KVWPPLGKKKFETLSYLPDMTETQLLKEIDYLIRSGWIPCIEFELEHGFVYREHHKSPGY 120

Query: 121 YDGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPS 180
           YDGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPS
Sbjct: 121 YDGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPS 180

Query: 181 SY 182
           SY
Sbjct: 181 SY 182

[Close]
BLAST of MC09g1515 vs. NCBI nr
Match: XP_022957356.1 (ribulose bisphosphate carboxylase small chain, chloroplastic-like [Cucurbita moschata] >KAG6601287.1 Ribulose bisphosphate carboxylase small chain, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032075.1 Ribulose bisphosphate carboxylase small chain, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 318 bits (815), Expect = 9.48e-109
Identity = 155/179 (86.59%), Postives = 165/179 (92.18%), Query Frame = 0 

Query: 4   SSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRKTNDITTLANNGGRVQCMKVW 63
           SSIVSSAAVASVNRASPAQASMVAPF GLKS AAFPVTRK NDITTLA+NG RV+CMKVW
Sbjct: 3   SSIVSSAAVASVNRASPAQASMVAPFVGLKSTAAFPVTRKNNDITTLASNGSRVKCMKVW 62

Query: 64  PPLGKKKFETLSYLPDMTETQLLKEIDYLIRSGWIPCIEFELEHGFVYREHHKSPGYYDG 123
           PPLG KKFETLSYLPD+T  QLLKEI YL+RSGW+PCIEFELE GFVYRE+H+SPGYYDG
Sbjct: 63  PPLGLKKFETLSYLPDLTSEQLLKEIAYLLRSGWVPCIEFELEKGFVYRENHRSPGYYDG 122

Query: 124 RYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSSY 182
           RYWTMWKLPM+GCTD +QV  EIEEAKKEYP+AFIRVIGFDN RQVQCISFIVYKP SY
Sbjct: 123 RYWTMWKLPMFGCTDPAQVAAEIEEAKKEYPNAFIRVIGFDNVRQVQCISFIVYKPPSY 181

[Close]
BLAST of MC09g1515 vs. NCBI nr
Match: XP_038892640.1 (ribulose bisphosphate carboxylase small chain, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 318 bits (815), Expect = 1.05e-108
Identity = 150/179 (83.80%), Postives = 166/179 (92.74%), Query Frame = 0 

Query: 4   SSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRKTNDITTLANNGGRVQCMKVW 63
           SSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFP+TRK NDITTLA+NGGRVQCMKVW
Sbjct: 3   SSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPITRKNNDITTLASNGGRVQCMKVW 62

Query: 64  PPLGKKKFETLSYLPDMTETQLLKEIDYLIRSGWIPCIEFELEHGFVYREHHKSPGYYDG 123
           PPLG KKFETLSYLPD+ E QL KE++YL+R GW+PC+EF++  GFVYRE+H+SPGYYDG
Sbjct: 63  PPLGLKKFETLSYLPDLDEAQLAKEVEYLLRKGWVPCLEFDIHDGFVYRENHRSPGYYDG 122

Query: 124 RYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSSY 182
           RYWTMWKLPM+GCTDA+QV+KEI EAKKEYP AFIRVIGFDN RQVQCISFIVYKP  +
Sbjct: 123 RYWTMWKLPMFGCTDAAQVIKEINEAKKEYPDAFIRVIGFDNVRQVQCISFIVYKPPKF 181

[Close]
BLAST of MC09g1515 vs. NCBI nr
Match: XP_022986878.1 (ribulose bisphosphate carboxylase small chain, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 318 bits (814), Expect = 1.35e-108
Identity = 153/179 (85.47%), Postives = 167/179 (93.30%), Query Frame = 0 

Query: 4   SSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRKTNDITTLANNGGRVQCMKVW 63
           SSIVSSAAVASVNRASPAQASMVAPF GLKS AAFPVTRK NDITTLA+NG RV+CMKVW
Sbjct: 3   SSIVSSAAVASVNRASPAQASMVAPFVGLKSTAAFPVTRKNNDITTLASNGSRVKCMKVW 62

Query: 64  PPLGKKKFETLSYLPDMTETQLLKEIDYLIRSGWIPCIEFELEHGFVYREHHKSPGYYDG 123
           PPLG KKFETLSYLPD+++ QLLKEI YL+RSGW+PCIEFELE GFVYRE+H+SPGYYDG
Sbjct: 63  PPLGLKKFETLSYLPDLSDAQLLKEIGYLLRSGWVPCIEFELEKGFVYRENHRSPGYYDG 122

Query: 124 RYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSSY 182
           RYWTMWKLPM+GCTD +QV  EIEEAKKEYP+AFIRVIGFDN RQVQCISFIVYKP++Y
Sbjct: 123 RYWTMWKLPMFGCTDPAQVAAEIEEAKKEYPNAFIRVIGFDNVRQVQCISFIVYKPATY 181

[Close]
BLAST of MC09g1515 vs. NCBI nr
Match: XP_023513414.1 (ribulose bisphosphate carboxylase small chain, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023513481.1 ribulose bisphosphate carboxylase small chain, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 317 bits (811), Expect = 3.86e-108
Identity = 154/179 (86.03%), Postives = 165/179 (92.18%), Query Frame = 0 

Query: 4   SSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRKTNDITTLANNGGRVQCMKVW 63
           SSIVSSAAVASVNRASPAQASMVAPF GLKS A FPVTRK NDITTLA+NG RV+CMKVW
Sbjct: 3   SSIVSSAAVASVNRASPAQASMVAPFVGLKSTAGFPVTRKNNDITTLASNGSRVKCMKVW 62

Query: 64  PPLGKKKFETLSYLPDMTETQLLKEIDYLIRSGWIPCIEFELEHGFVYREHHKSPGYYDG 123
           PPLG KKFETLSYLPD+T  QLLKEI YL+RSGW+PCIEFELE GFVYRE+H+SPGYYDG
Sbjct: 63  PPLGLKKFETLSYLPDLTGEQLLKEIAYLLRSGWVPCIEFELEKGFVYRENHRSPGYYDG 122

Query: 124 RYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSSY 182
           RYWTMWKLPM+GCTD +QV  EIEEAKKEYP+AFIRVIGFDN RQVQCISFIVYKP+SY
Sbjct: 123 RYWTMWKLPMFGCTDPAQVAAEIEEAKKEYPNAFIRVIGFDNVRQVQCISFIVYKPASY 181

[Close]
BLAST of MC09g1515 vs. ExPASy TrEMBL
Match: A0A6J1D9J4 (Ribulose bisphosphate carboxylase small subunit OS=Momordica charantia OX=3673 GN=LOC111018606 PE=3 SV=1)

HSP 1 Score: 367 bits (943), Expect = 1.45e-128
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0 

Query: 1   MASSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRKTNDITTLANNGGRVQCM 60
           MASSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRKTNDITTLANNGGRVQCM
Sbjct: 1   MASSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRKTNDITTLANNGGRVQCM 60

Query: 61  KVWPPLGKKKFETLSYLPDMTETQLLKEIDYLIRSGWIPCIEFELEHGFVYREHHKSPGY 120
           KVWPPLGKKKFETLSYLPDMTETQLLKEIDYLIRSGWIPCIEFELEHGFVYREHHKSPGY
Sbjct: 61  KVWPPLGKKKFETLSYLPDMTETQLLKEIDYLIRSGWIPCIEFELEHGFVYREHHKSPGY 120

Query: 121 YDGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPS 180
           YDGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPS
Sbjct: 121 YDGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPS 180

Query: 181 SY 182
           SY
Sbjct: 181 SY 182

[Close]
BLAST of MC09g1515 vs. ExPASy TrEMBL
Match: A0A6J1GZ01 (Ribulose bisphosphate carboxylase small subunit OS=Cucurbita moschata OX=3662 GN=LOC111458779 PE=3 SV=1)

HSP 1 Score: 318 bits (815), Expect = 4.59e-109
Identity = 155/179 (86.59%), Postives = 165/179 (92.18%), Query Frame = 0 

Query: 4   SSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRKTNDITTLANNGGRVQCMKVW 63
           SSIVSSAAVASVNRASPAQASMVAPF GLKS AAFPVTRK NDITTLA+NG RV+CMKVW
Sbjct: 3   SSIVSSAAVASVNRASPAQASMVAPFVGLKSTAAFPVTRKNNDITTLASNGSRVKCMKVW 62

Query: 64  PPLGKKKFETLSYLPDMTETQLLKEIDYLIRSGWIPCIEFELEHGFVYREHHKSPGYYDG 123
           PPLG KKFETLSYLPD+T  QLLKEI YL+RSGW+PCIEFELE GFVYRE+H+SPGYYDG
Sbjct: 63  PPLGLKKFETLSYLPDLTSEQLLKEIAYLLRSGWVPCIEFELEKGFVYRENHRSPGYYDG 122

Query: 124 RYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSSY 182
           RYWTMWKLPM+GCTD +QV  EIEEAKKEYP+AFIRVIGFDN RQVQCISFIVYKP SY
Sbjct: 123 RYWTMWKLPMFGCTDPAQVAAEIEEAKKEYPNAFIRVIGFDNVRQVQCISFIVYKPPSY 181

[Close]
BLAST of MC09g1515 vs. ExPASy TrEMBL
Match: A0A6J1JHU0 (Ribulose bisphosphate carboxylase small subunit OS=Cucurbita maxima OX=3661 GN=LOC111484459 PE=3 SV=1)

HSP 1 Score: 318 bits (814), Expect = 6.52e-109
Identity = 153/179 (85.47%), Postives = 167/179 (93.30%), Query Frame = 0 

Query: 4   SSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRKTNDITTLANNGGRVQCMKVW 63
           SSIVSSAAVASVNRASPAQASMVAPF GLKS AAFPVTRK NDITTLA+NG RV+CMKVW
Sbjct: 3   SSIVSSAAVASVNRASPAQASMVAPFVGLKSTAAFPVTRKNNDITTLASNGSRVKCMKVW 62

Query: 64  PPLGKKKFETLSYLPDMTETQLLKEIDYLIRSGWIPCIEFELEHGFVYREHHKSPGYYDG 123
           PPLG KKFETLSYLPD+++ QLLKEI YL+RSGW+PCIEFELE GFVYRE+H+SPGYYDG
Sbjct: 63  PPLGLKKFETLSYLPDLSDAQLLKEIGYLLRSGWVPCIEFELEKGFVYRENHRSPGYYDG 122

Query: 124 RYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSSY 182
           RYWTMWKLPM+GCTD +QV  EIEEAKKEYP+AFIRVIGFDN RQVQCISFIVYKP++Y
Sbjct: 123 RYWTMWKLPMFGCTDPAQVAAEIEEAKKEYPNAFIRVIGFDNVRQVQCISFIVYKPATY 181

[Close]
BLAST of MC09g1515 vs. ExPASy TrEMBL
Match: A0A1R3FZH6 (Ribulose bisphosphate carboxylase small subunit OS=Corchorus olitorius OX=93759 GN=COLO4_37758 PE=3 SV=1)

HSP 1 Score: 314 bits (805), Expect = 1.59e-107
Identity = 148/180 (82.22%), Postives = 170/180 (94.44%), Query Frame = 0 

Query: 4   SSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRKTN-DITTLANNGGRVQCMKV 63
           SS+VSSA +AS  RASPAQASMVAPFTGLKS++AFPVTRK+N DIT+LA+NGGRVQCMKV
Sbjct: 3   SSVVSSATIASGARASPAQASMVAPFTGLKSSSAFPVTRKSNNDITSLASNGGRVQCMKV 62

Query: 64  WPPLGKKKFETLSYLPDMTETQLLKEIDYLIRSGWIPCIEFELEHGFVYREHHKSPGYYD 123
           WPP+GKKKFETLSYLPD+T  QL KE+DYL+RSGWIPC+EFELEHGFVYRE+H+SPGYYD
Sbjct: 63  WPPIGKKKFETLSYLPDLTREQLAKEVDYLLRSGWIPCLEFELEHGFVYRENHRSPGYYD 122

Query: 124 GRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSSY 182
           GRYWTMWKLPM+GCTD+SQV+KE+EEAKKEYP+AFIR+IGF NKRQVQCISFI YKP ++
Sbjct: 123 GRYWTMWKLPMFGCTDSSQVLKELEEAKKEYPNAFIRIIGFHNKRQVQCISFIAYKPPTF 182

[Close]
BLAST of MC09g1515 vs. ExPASy TrEMBL
Match: A0A5D3CCQ3 (Ribulose bisphosphate carboxylase small subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001010 PE=3 SV=1)

HSP 1 Score: 313 bits (803), Expect = 3.56e-107
Identity = 151/179 (84.36%), Postives = 164/179 (91.62%), Query Frame = 0 

Query: 4   SSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRKTNDITTLANNGGRVQCMKVW 63
           SSI+SSAAVASVN ASPAQASMVAPFTGLKSAAAFPVTRK NDITTLA+NGGRVQCMKVW
Sbjct: 3   SSILSSAAVASVNSASPAQASMVAPFTGLKSAAAFPVTRKNNDITTLASNGGRVQCMKVW 62

Query: 64  PPLGKKKFETLSYLPDMTETQLLKEIDYLIRSGWIPCIEFELEHGFVYREHHKSPGYYDG 123
           PPLG KKFETLSYLPDM+  QL KE+DYL+R GWIPCIEF++  GFVYRE+H+SPGYYDG
Sbjct: 63  PPLGLKKFETLSYLPDMSNEQLGKEVDYLLRKGWIPCIEFDIHSGFVYRENHRSPGYYDG 122

Query: 124 RYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSSY 182
           RYWTMWKLPM+GCTD+SQVV EIEEAKKEYP A+IRVIGFDN RQVQCISFI YKP  +
Sbjct: 123 RYWTMWKLPMFGCTDSSQVVNEIEEAKKEYPDAYIRVIGFDNVRQVQCISFIAYKPPRF 181

[Close]
BLAST of MC09g1515 vs. TAIR 10
Match: AT5G38410.1 (Ribulose bisphosphate carboxylase (small chain) family protein )

HSP 1 Score: 295.8 bits (756), Expect = 2.3e-80
Identity = 137/181 (75.69%), Postives = 164/181 (90.61%), Query Frame = 0 

Query: 3   SSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRKTN-DITTLANNGGRVQCMK 62
           +SS++SSAAV +    SPAQA+MVAPFTGLKS+AAFPVTRKTN DIT++A+NGGRV CMK
Sbjct: 2   ASSMLSSAAVVT----SPAQATMVAPFTGLKSSAAFPVTRKTNKDITSIASNGGRVSCMK 61

Query: 63  VWPPLGKKKFETLSYLPDMTETQLLKEIDYLIRSGWIPCIEFELEHGFVYREHHKSPGYY 122
           VWPP+GKKKFETLSYLPD+++ +L KE+DYL+R+ WIPC+EFELEHGFVYREH  +PGYY
Sbjct: 62  VWPPIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYY 121

Query: 123 DGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSS 182
           DGRYWTMWKLP++GCTD++QV+KE+EE KKEYP AFIR+IGFDN RQVQCISFI YKP S
Sbjct: 122 DGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPPS 178

[Close]
BLAST of MC09g1515 vs. TAIR 10
Match: AT5G38430.1 (Ribulose bisphosphate carboxylase (small chain) family protein )

HSP 1 Score: 292.7 bits (748), Expect = 2.0e-79
Identity = 135/181 (74.59%), Postives = 162/181 (89.50%), Query Frame = 0 

Query: 3   SSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRK-TNDITTLANNGGRVQCMK 62
           +SS++SSAAV +    SPAQA+MVAPFTGLKS+A+FPVTRK  NDIT++ +NGGRV CMK
Sbjct: 2   ASSMLSSAAVVT----SPAQATMVAPFTGLKSSASFPVTRKANNDITSITSNGGRVSCMK 61

Query: 63  VWPPLGKKKFETLSYLPDMTETQLLKEIDYLIRSGWIPCIEFELEHGFVYREHHKSPGYY 122
           VWPP+GKKKFETLSYLPD+T+ +L KE+DYL+R+ WIPC+EFELEHGFVYREH  +PGYY
Sbjct: 62  VWPPIGKKKFETLSYLPDLTDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYY 121

Query: 123 DGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSS 182
           DGRYWTMWKLP++GCTD++QV+KE+EE KKEYP AFIR+IGFDN RQVQCISFI YKP S
Sbjct: 122 DGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPPS 178

[Close]
BLAST of MC09g1515 vs. TAIR 10
Match: AT1G67090.1 (ribulose bisphosphate carboxylase small chain 1A )

HSP 1 Score: 290.0 bits (741), Expect = 1.3e-78
Identity = 134/181 (74.03%), Postives = 161/181 (88.95%), Query Frame = 0 

Query: 3   SSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRK-TNDITTLANNGGRVQCMK 62
           +SS++SSA +     ASPAQA+MVAPF GLKS+AAFP TRK  NDIT++ +NGGRV CM+
Sbjct: 2   ASSMLSSATMV----ASPAQATMVAPFNGLKSSAAFPATRKANNDITSITSNGGRVNCMQ 61

Query: 63  VWPPLGKKKFETLSYLPDMTETQLLKEIDYLIRSGWIPCIEFELEHGFVYREHHKSPGYY 122
           VWPP+GKKKFETLSYLPD+T+++L KE+DYLIR+ WIPC+EFELEHGFVYREH  SPGYY
Sbjct: 62  VWPPIGKKKFETLSYLPDLTDSELAKEVDYLIRNKWIPCVEFELEHGFVYREHGNSPGYY 121

Query: 123 DGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSS 182
           DGRYWTMWKLP++GCTD++QV+KE+EE KKEYP+AFIR+IGFDN RQVQCISFI YKP S
Sbjct: 122 DGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPNAFIRIIGFDNTRQVQCISFIAYKPPS 178

[Close]
BLAST of MC09g1515 vs. TAIR 10
Match: AT5G38410.3 (Ribulose bisphosphate carboxylase (small chain) family protein )

HSP 1 Score: 289.7 bits (740), Expect = 1.7e-78
Identity = 137/186 (73.66%), Postives = 164/186 (88.17%), Query Frame = 0 

Query: 3   SSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRKTN-DITTLANNGGRVQCMK 62
           +SS++SSAAV +    SPAQA+MVAPFTGLKS+AAFPVTRKTN DIT++A+NGGRV CMK
Sbjct: 2   ASSMLSSAAVVT----SPAQATMVAPFTGLKSSAAFPVTRKTNKDITSIASNGGRVSCMK 61

Query: 63  VWPPLGKKKFETLSYLPDMTETQLLKEIDYLIRSGWIPCIEFELE-----HGFVYREHHK 122
           VWPP+GKKKFETLSYLPD+++ +L KE+DYL+R+ WIPC+EFELE     HGFVYREH  
Sbjct: 62  VWPPIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEVINTKHGFVYREHGN 121

Query: 123 SPGYYDGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIV 182
           +PGYYDGRYWTMWKLP++GCTD++QV+KE+EE KKEYP AFIR+IGFDN RQVQCISFI 
Sbjct: 122 TPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIA 181

[Close]
BLAST of MC09g1515 vs. TAIR 10
Match: AT5G38420.1 (Ribulose bisphosphate carboxylase (small chain) family protein )

HSP 1 Score: 288.9 bits (738), Expect = 2.9e-78
Identity = 134/183 (73.22%), Postives = 159/183 (86.89%), Query Frame = 0 

Query: 1   MASSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRK-TNDITTLANNGGRVQC 60
           MASS   S+A V      SPAQA+MVAPFTGLKS+A+FPVTRK  NDIT++ +NGGRV C
Sbjct: 1   MASSMFSSTAVV-----TSPAQATMVAPFTGLKSSASFPVTRKANNDITSITSNGGRVSC 60

Query: 61  MKVWPPLGKKKFETLSYLPDMTETQLLKEIDYLIRSGWIPCIEFELEHGFVYREHHKSPG 120
           MKVWPP+GKKKFETLSYLPD+++ +L KE+DYL+R+ WIPC+EFELEHGFVYREH  +PG
Sbjct: 61  MKVWPPIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPG 120

Query: 121 YYDGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKP 180
           YYDGRYWTMWKLP++GCTD++QV+KE+EE KKEYP AFIR+IGFDN RQVQCISFI YKP
Sbjct: 121 YYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKP 178

Query: 181 SSY 183
            S+
Sbjct: 181 PSF 178

The following BLAST results are available for this feature:
BLAST of MC09g1515 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P084746.0e-8179.78Ribulose bisphosphate carboxylase small subunit, chloroplastic OS=Cucumis sativu... [more]
P160326.7e-8077.22Ribulose bisphosphate carboxylase small subunit, chloroplastic 1 OS=Mesembryanth... [more]
P107983.3e-7975.69Ribulose bisphosphate carboxylase small subunit 3B, chloroplastic OS=Arabidopsis... [more]
P107962.8e-7874.59Ribulose bisphosphate carboxylase small subunit 1B, chloroplastic OS=Arabidopsis... [more]
P279853.7e-7875.14Ribulose bisphosphate carboxylase small subunit, chloroplastic 2 OS=Brassica nap... [more]
BLAST of MC09g1515 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022150468.12.99e-128100.00ribulose bisphosphate carboxylase small chain, chloroplastic-like [Momordica cha... [more]
XP_022957356.19.48e-10986.59ribulose bisphosphate carboxylase small chain, chloroplastic-like [Cucurbita mos... [more]
XP_038892640.11.05e-10883.80ribulose bisphosphate carboxylase small chain, chloroplastic-like [Benincasa his... [more]
XP_022986878.11.35e-10885.47ribulose bisphosphate carboxylase small chain, chloroplastic-like [Cucurbita max... [more]
XP_023513414.13.86e-10886.03ribulose bisphosphate carboxylase small chain, chloroplastic-like [Cucurbita pep... [more]
BLAST of MC09g1515 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1D9J41.45e-128100.00Ribulose bisphosphate carboxylase small subunit OS=Momordica charantia OX=3673 G... [more]
A0A6J1GZ014.59e-10986.59Ribulose bisphosphate carboxylase small subunit OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1JHU06.52e-10985.47Ribulose bisphosphate carboxylase small subunit OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A1R3FZH61.59e-10782.22Ribulose bisphosphate carboxylase small subunit OS=Corchorus olitorius OX=93759 ... [more]
A0A5D3CCQ33.56e-10784.36Ribulose bisphosphate carboxylase small subunit OS=Cucumis melo var. makuwa OX=1... [more]
BLAST of MC09g1515 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G38410.12.3e-8075.69Ribulose bisphosphate carboxylase (small chain) family protein [more]
AT5G38430.12.0e-7974.59Ribulose bisphosphate carboxylase (small chain) family protein [more]
AT1G67090.11.3e-7874.03ribulose bisphosphate carboxylase small chain 1A [more]
AT5G38410.31.7e-7873.66Ribulose bisphosphate carboxylase (small chain) family protein [more]
AT5G38420.12.9e-7873.22Ribulose bisphosphate carboxylase (small chain) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024681Ribulose bisphosphate carboxylase, small subunitPRINTSPR00152RUBISCOSMALLcoord: 48..66
score: 68.48
coord: 153..179
score: 79.53
coord: 69..95
score: 65.95
coord: 119..148
score: 81.97
coord: 22..39
score: 76.88
coord: 97..112
score: 70.16
IPR000894Ribulose bisphosphate carboxylase small subunit, domainSMARTSM00961RuBisCO_small_2_acoord: 70..179
e-value: 1.6E-38
score: 144.0
IPR000894Ribulose bisphosphate carboxylase small subunit, domainPFAMPF00101RuBisCO_smallcoord: 71..179
e-value: 1.0E-39
score: 134.4
IPR000894Ribulose bisphosphate carboxylase small subunit, domainCDDcd03527RuBisCO_smallcoord: 69..179
e-value: 1.39289E-59
score: 178.99
IPR036385Ribulose bisphosphate carboxylase, small subunit superfamilyGENE3D3.30.190.10Ribulose bisphosphate carboxylase, small subunitcoord: 60..182
e-value: 2.0E-61
score: 207.5
IPR036385Ribulose bisphosphate carboxylase, small subunit superfamilySUPERFAMILY55239RuBisCO, small subunitcoord: 60..181
IPR024680Ribulose-1,5-bisphosphate carboxylase small subunit, N-terminalPFAMPF12338RbcScoord: 4..45
e-value: 2.7E-24
score: 85.1
NoneNo IPR availablePANTHERPTHR31262RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1, CHLOROPLASTICcoord: 3..182
NoneNo IPR availablePANTHERPTHR31262:SF18RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAINcoord: 3..182

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC09g1515.1MC09g1515.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015977 carbon fixation
biological_process GO:0009853 photorespiration
biological_process GO:0015979 photosynthesis
cellular_component GO:0009506 plasmodesma
cellular_component GO:0009536 plastid