Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTCAAGCCGTCCGTGCTTCTTATGGAAGCGTTTTGCCCAAGTGGCCAAAGCACGAATATTACCAAGTTCCAGGCTTGATGATTCCCAGTAAAGTTTGTACTACCTCCTCATTGTTCACAGGTTTCTTCAACCCTTTGAACAACGAAATTTATTGCCGTGATTTAGGTGGAGTTAGTGGACCTTGTCTTGGCTCTTCCAATGGTTGGTTGGTAGTTCTGGAAAACTATTGGAAACTAAAACTCTTTAATCCAATTACAAAGTCCCAATTCCAACTCCCTCCAACCACCAACAACCACCAAAATCATGTTCGTATGGCATATGTACACAAAGTTGTGGTATTGCCTTGTAATGATAATTTTGTAGCACTGGCTATACATGATGTACTTTCAAATCTTGCTTTTGCTAAGCTTGCTGACGACAAATGGACAACTATTCCCACGTCTGACGTCTCTGATTGCATATTCTTCCGTGAAAAGATTTCCGCTGTGACTAAATTGGGAGATCTTGTGGTCTTTTCTATCCACGATCCAACACAGGTGGTGGATATAAAAGTGGCAAACGTGCATGAGAGACGACCGTCTTCGATTGAGTCCACGTTGTATCTGGTTGGCCAAGATGATGAATTGTTGATGGTTGAAAGGCTTTTTGGGCGGAAACTTATTCAATTTAGTGGGCAAGGAAGGTACAAGACTCTTACGTTCAACTTATACAAGTTGAATTGGGTAGAAAATAGTGCGATGTGGTCTAAGATTTATAGCTTGGACGGGTATTCTATTTTCTTGGGATTGAATACTTCGCTTTGTATATCGTCCAAAGATTGCCCAAGGTTGAAAAGTAATCAAATCTTTTACACAAATGATGGCACCGAGCTTGATAACAGAGGTAGGTTTTGTGGGAATGATTTTGGTGTATACAATGTAAGAGAAGGAATATGTAAAAATTTATTGGGTAATTATGGTTATCCTTCCCACCAATACGTTTGGCCTAATCCCATTTGGGTGGTGCTTAACCCTTGC
mRNA sequence
TTTCAAGCCGTCCGTGCTTCTTATGGAAGCGTTTTGCCCAAGTGGCCAAAGCACGAATATTACCAAGTTCCAGGCTTGATGATTCCCAGTAAAGTTTGTACTACCTCCTCATTGTTCACAGGTTTCTTCAACCCTTTGAACAACGAAATTTATTGCCGTGATTTAGGTGGAGTTAGTGGACCTTGTCTTGGCTCTTCCAATGGTTGGTTGGTAGTTCTGGAAAACTATTGGAAACTAAAACTCTTTAATCCAATTACAAAGTCCCAATTCCAACTCCCTCCAACCACCAACAACCACCAAAATCATGTTCGTATGGCATATGTACACAAAGTTGTGGTATTGCCTTGTAATGATAATTTTGTAGCACTGGCTATACATGATGTACTTTCAAATCTTGCTTTTGCTAAGCTTGCTGACGACAAATGGACAACTATTCCCACGTCTGACGTCTCTGATTGCATATTCTTCCGTGAAAAGATTTCCGCTGTGACTAAATTGGGAGATCTTGTGGTCTTTTCTATCCACGATCCAACACAGGTGGTGGATATAAAAGTGGCAAACGTGCATGAGAGACGACCGTCTTCGATTGAGTCCACGTTGTATCTGGTTGGCCAAGATGATGAATTGTTGATGGTTGAAAGGCTTTTTGGGCGGAAACTTATTCAATTTAGTGGGCAAGGAAGGTACAAGACTCTTACGTTCAACTTATACAAGTTGAATTGGGTAGAAAATAGTGCGATGTGGTCTAAGATTTATAGCTTGGACGGGTATTCTATTTTCTTGGGATTGAATACTTCGCTTTGTATATCGTCCAAAGATTGCCCAAGGTTGAAAAGTAATCAAATCTTTTACACAAATGATGGCACCGAGCTTGATAACAGAGGTAGGTTTTGTGGGAATGATTTTGGTGTATACAATGTAAGAGAAGGAATATGTAAAAATTTATTGGGTAATTATGGTTATCCTTCCCACCAATACGTTTGGCCTAATCCCATTTGGGTGGTGCTTAACCCTTGC
Coding sequence (CDS)
TTTCAAGCCGTCCGTGCTTCTTATGGAAGCGTTTTGCCCAAGTGGCCAAAGCACGAATATTACCAAGTTCCAGGCTTGATGATTCCCAGTAAAGTTTGTACTACCTCCTCATTGTTCACAGGTTTCTTCAACCCTTTGAACAACGAAATTTATTGCCGTGATTTAGGTGGAGTTAGTGGACCTTGTCTTGGCTCTTCCAATGGTTGGTTGGTAGTTCTGGAAAACTATTGGAAACTAAAACTCTTTAATCCAATTACAAAGTCCCAATTCCAACTCCCTCCAACCACCAACAACCACCAAAATCATGTTCGTATGGCATATGTACACAAAGTTGTGGTATTGCCTTGTAATGATAATTTTGTAGCACTGGCTATACATGATGTACTTTCAAATCTTGCTTTTGCTAAGCTTGCTGACGACAAATGGACAACTATTCCCACGTCTGACGTCTCTGATTGCATATTCTTCCGTGAAAAGATTTCCGCTGTGACTAAATTGGGAGATCTTGTGGTCTTTTCTATCCACGATCCAACACAGGTGGTGGATATAAAAGTGGCAAACGTGCATGAGAGACGACCGTCTTCGATTGAGTCCACGTTGTATCTGGTTGGCCAAGATGATGAATTGTTGATGGTTGAAAGGCTTTTTGGGCGGAAACTTATTCAATTTAGTGGGCAAGGAAGGTACAAGACTCTTACGTTCAACTTATACAAGTTGAATTGGGTAGAAAATAGTGCGATGTGGTCTAAGATTTATAGCTTGGACGGGTATTCTATTTTCTTGGGATTGAATACTTCGCTTTGTATATCGTCCAAAGATTGCCCAAGGTTGAAAAGTAATCAAATCTTTTACACAAATGATGGCACCGAGCTTGATAACAGAGGTAGGTTTTGTGGGAATGATTTTGGTGTATACAATGTAAGAGAAGGAATATGTAAAAATTTATTGGGTAATTATGGTTATCCTTCCCACCAATACGTTTGGCCTAATCCCATTTGGGTGGTGCTTAACCCTTGC
Protein sequence
FQAVRASYGSVLPKWPKHEYYQVPGLMIPSKVCTTSSLFTGFFNPLNNEIYCRDLGGVSGPCLGSSNGWLVVLENYWKLKLFNPITKSQFQLPPTTNNHQNHVRMAYVHKVVVLPCNDNFVALAIHDVLSNLAFAKLADDKWTTIPTSDVSDCIFFREKISAVTKLGDLVVFSIHDPTQVVDIKVANVHERRPSSIESTLYLVGQDDELLMVERLFGRKLIQFSGQGRYKTLTFNLYKLNWVENSAMWSKIYSLDGYSIFLGLNTSLCISSKDCPRLKSNQIFYTNDGTELDNRGRFCGNDFGVYNVREGICKNLLGNYGYPSHQYVWPNPIWVVLNPC
Homology
BLAST of MC09g0892 vs. NCBI nr
Match:
XP_022156879.1 (putative F-box protein At4g17565 [Momordica charantia])
HSP 1 Score: 386 bits (991), Expect = 9.20e-129
Identity = 199/310 (64.19%), Postives = 232/310 (74.84%), Query Frame = 0
Query: 1 FQAVRASYGSVLPKWPKHEYYQVPGLMIPSKVCTTSSLFTGFFNPLNNEIYCRDLGGVSG 60
F+AV AS S LPKWPKH+YYQVP LMIP KVC SSLF GFFNPLN EIYC DL VSG
Sbjct: 31 FRAVCASCRSTLPKWPKHQYYQVPRLMIPHKVC--SSLFRGFFNPLNQEIYCPDLSEVSG 90
Query: 61 PCLGSSNGWLVVLENYWKLKLFNPITKSQFQLPPTTN--------------NHQNHVRMA 120
CLGSSNGWLV+L+N W LKLFNP+TK Q QLP T++ +HQ V +A
Sbjct: 91 RCLGSSNGWLVLLDNSWTLKLFNPLTKLQLQLPSTSSFPDPYLIYNPNGRIDHQTDVPVA 150
Query: 121 YVHKVVVLPCNDNFVALAIHDVLSNLAFAKLADDKWTTIPTSDVSDCIFFREKISAVTKL 180
YVHK+ +L D+F+A+AI++V S +AF KL DDKWT IPTSD+ DCI F EKI A+TK
Sbjct: 151 YVHKICLLHSKDHFIAVAIYNVFSKIAFTKLGDDKWTAIPTSDICDCILFHEKIYALTKF 210
Query: 181 GDLVVFSIHDPTQVVDIKVANVHE--RRPSSIESTLYLVGQDDELLMVERLFGRKLIQFS 240
DLVV I DPTQV IKV N++ R+ SIESTLYLVG+DDELLMVERLF + +Q
Sbjct: 211 QDLVVSPIDDPTQVAGIKVKNMNVIMRQRLSIESTLYLVGRDDELLMVERLFKVQHVQLR 270
Query: 241 GQGRY--KTLTFNLYKLNWVENSAMWSKIYSLDGYSIFLGLNTSLCISSKDCPRLKSNQI 292
G+ Y KT+ FNLYKL+WVE+ A WSKIY+LDG SIFLGLNTSLCISSKDCP+L+ NQI
Sbjct: 271 GKTSYASKTVGFNLYKLDWVESRATWSKIYNLDGCSIFLGLNTSLCISSKDCPKLRGNQI 330
BLAST of MC09g0892 vs. NCBI nr
Match:
XP_022155372.1 (F-box protein SKIP23-like [Momordica charantia])
HSP 1 Score: 242 bits (618), Expect = 1.98e-73
Identity = 160/378 (42.33%), Postives = 217/378 (57.41%), Query Frame = 0
Query: 1 FQAVRASYGSVLPKWPKHEYYQVPGLMIPSKVCTTSSLFTGFFNPLNNEIYCRDLGGVSG 60
F+AVR S+G VLP+ P+H YY +P LMIP + GF+N LN ++Y +L ++
Sbjct: 28 FRAVRRSWGRVLPRQPRHSYYNIPCLMIPYHPHNDN--LRGFYNVLNQQVYYLELPQLTN 87
Query: 61 P-CLGSSNGWLVVLENYWKLKLFNPITKSQFQLPPTTN---------NHQNH-------- 120
+GSS GWLV L+N L+L NP+TKSQ QLPP ++ N+Q
Sbjct: 88 QKYIGSSKGWLVTLDNGLTLQLLNPLTKSQLQLPPISSFPGIIGYDPNNQGEEYTLLRPM 147
Query: 121 ----------VRMAYVHKVVV---LPCNDNFVALAIHDVLSNLAFAKLADDKWTTIPTS- 180
V Y+ K+V+ P ND F+A+AI+D LAF K DDKWT I TS
Sbjct: 148 DKINTKSRARVHGEYIRKIVLSSLAPSND-FMAVAIYDSSDKLAFTKFGDDKWTAISTSL 207
Query: 181 -DVSDCIFFREKISAVTKLGDLVVFSIHD-PTQVVDIKVANVHERRPS-SIESTLYLVGQ 240
+ DCI+F KI AV LGDL V SI PTQ+V++ + +RP + S LYLV
Sbjct: 208 NNFHDCIYFDGKIYAVNVLGDLGVCSIDGTPTQLVNLPL-----KRPKLEVTSKLYLVET 267
Query: 241 DDELLMVERLFGRKLIQFSGQGR----YKTLTFNLYKLNWVENSAMWSKIYSLDGYSIFL 300
+ ++LMVERL K + +GR YKT+ FNL+K + S W KI +LDG +IFL
Sbjct: 268 NGDMLMVERL--SKYMALFNRGRRCYGYKTIGFNLFKFD----SEGWLKIENLDGCTIFL 327
Query: 301 GLNTSLCISSKDCPRLKSNQIFYTNDGTELDNR--GRFCGNDFGVYNVREGICKNLLGNY 337
GLNTS+CISSK CP+L+ N I+YT D + + G DFGV+++ + + L +
Sbjct: 328 GLNTSICISSKSCPKLRGNHIYYTFDHEKEPAQVIGSHACYDFGVFDMTDRSRRCLW--H 387
BLAST of MC09g0892 vs. NCBI nr
Match:
XP_022155366.1 (F-box protein SKIP23-like [Momordica charantia])
HSP 1 Score: 224 bits (572), Expect = 6.14e-67
Identity = 155/376 (41.22%), Postives = 207/376 (55.05%), Query Frame = 0
Query: 1 FQAVRASYGSVLPKWPKHEYYQVPGLMIPSKVCTTSSLFTGFFNPLNNEIYCRDLGGVSG 60
F+AVR S+G VLP+ P+H YY +P LMIP + GF+N LN ++Y +L ++
Sbjct: 28 FRAVRRSWGHVLPRQPRHSYYNIPCLMIPYH--PHNGNLRGFYNVLNQQVYYLELPQLTN 87
Query: 61 P-CLGSSNGWLVVLENYWKLKLFNPITKSQFQLPPTTN---------NHQNH-------- 120
+GSS GWLV L+N L+L NP+TKSQ QLPPT++ N+Q
Sbjct: 88 QKYIGSSKGWLVTLDNGLTLQLLNPLTKSQLQLPPTSSFPGIIGYDPNNQGEEYTLLRPM 147
Query: 121 ----------VRMAYVHKVVV---LPCNDNFVALAIHDVLSNLAFAKLADDKWTTIPTS- 180
V Y+ K+V+ P ND F+A+AI+D LAF K DDKWT I TS
Sbjct: 148 DKINTKSRARVHGEYIRKIVLSSLAPSND-FMAVAIYDSSDKLAFTKFGDDKWTAISTSL 207
Query: 181 -DVSDCIFFREKISAVTKLGDLVVFSIHD-PTQVVDIKVANVHERRPS-SIESTLYLVGQ 240
+ DCI+F KI AV LGDL V SI D PTQ+V++ + +RP + S LY+V
Sbjct: 208 NNFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPL-----KRPKLEVTSKLYMVET 267
Query: 241 DDELLMVERLFGRKLIQFSGQGR----YKTLTFNLYKLNWVENSAMWSKIYSLDGYSIFL 300
+ +LLMVERL K + +GR YKT+ FNL+KL+ S W KI +LDG +IFL
Sbjct: 268 NGDLLMVERL--SKYMALFNRGRRCYGYKTIGFNLFKLD----SDGWLKIENLDGCTIFL 327
Query: 301 GLNTSLCISSKDCPRLKSNQIFYTNDGTELDNRGRFCGNDFGVYNVREGICKNLLGNYGY 337
GLNTS+CISSK CP+L+ +R R C ++ +
Sbjct: 328 GLNTSMCISSKSCPKLR--------------DRSRRC-----LW-------------HDD 357
BLAST of MC09g0892 vs. NCBI nr
Match:
KAF3973470.1 (hypothetical protein CMV_003114 [Castanea mollissima])
HSP 1 Score: 160 bits (404), Expect = 2.17e-41
Identity = 118/378 (31.22%), Postives = 179/378 (47.35%), Query Frame = 0
Query: 7 SYGSVLPKWPKHEYYQVPGLMIPSKVCTTSSLFTGFFNPLNNEIYCRDLGGVSGPCL-GS 66
S+ S+LPK P H+ QVP LMIP S FF+ L N++Y +L V G L GS
Sbjct: 56 SFQSLLPKVPNHQLSQVPWLMIPP-ANDASDTHCKFFSILENKMYKLELPKVQGKLLRGS 115
Query: 67 SNGWLVVLENYWKLKLFNPITKSQFQLPPTTN---------------------------- 126
S+GW++++ Y +L L NP+T++Q QLPP
Sbjct: 116 SHGWVLMINGYPELNLINPLTRAQIQLPPIDTFPDVLGYRPYMADEEYLILRVRPNLPKP 175
Query: 127 -----NHQNHVRMAYVHKVVVLP---CNDNFVALAIHDVLSNLAFAKLADDKWTTIPTSD 186
+VR ++HK+V+ + ++A+AI+ ++ +LAF K D KWT I +D
Sbjct: 176 AKVQVESIAYVRDVFIHKLVLSSNPTTSKEYMAMAIYGMVLDLAFCKNGDKKWTLIQQND 235
Query: 187 VS---DCIFFREKISAVTKLGDLVV---FSIHDPTQVVDIKVANV--HERRPSSIESTLY 246
D I + K + G L V S+ + TQ+V + + +I +
Sbjct: 236 QHMNHDIISHKGKFYVLRNDGGLWVGDSASLPNMTQLVPSLPRTILNYFSLARTISGEFF 295
Query: 247 LVGQDDELLMVERLFGRKLIQFSGQGRYKTLTFNLYKLNWVENSAMWSKIYSLDGYSIFL 306
+V + +L + R+ YKT+ F +YKL+ + W + ++ F+
Sbjct: 296 MVRKIHKLEPISRI--------DHIYSYKTIDFVVYKLDHHQGELKWRMVKNIGDNLFFV 355
Query: 307 GLNTSLCISSKDCPRLKSNQIFYTNDGTELDNRGRFCGNDFGVYNVREGICKNLLGNYGY 338
G+N SLCISS++ R K N I++T+D + G G+D GVYNV + K L G Y
Sbjct: 356 GINDSLCISSQNLARYKGNCIYFTDDYFDCHREGIVGGHDMGVYNVEDRSIKPLPGYNYY 415
BLAST of MC09g0892 vs. NCBI nr
Match:
OVA10865.1 (Protein of unknown function DUF295 [Macleaya cordata])
HSP 1 Score: 151 bits (382), Expect = 1.21e-38
Identity = 118/352 (33.52%), Postives = 180/352 (51.14%), Query Frame = 0
Query: 1 FQAVRASYGSVLPKWPKHEYYQVPGLMIPSKVCTTSSLFTGFFNPLNNEIYCRDLGGV-S 60
F+AV + S LP P H Q+P LM+P + SS GFFN N++Y +L + S
Sbjct: 30 FRAVCVKWCSTLPPIPHHLPCQLPWLMLPHN--SNSSNRRGFFNLSENKVYWLNLPEICS 89
Query: 61 GP-CLGSSNGWLVVL-ENYWKLKLFNPITKSQFQLPPTTNNHQNHVRMAYVHKVVV---- 120
G C GSS GW+V+L ++ + LFNP+T+ Q QLPP N + + ++ KVV+
Sbjct: 90 GSRCCGSSQGWVVLLLQHSPNILLFNPLTRVQLQLPPFRLNMIDPC-LLFIKKVVLSSSP 149
Query: 121 LPCNDNFVALAIHDVLSNLAFAKLADDKWTTIPTSD--VSDCIFFREKISAVTKLGDLVV 180
+ +++A+AI + LAF K + WT I +D D I++ AV K G L V
Sbjct: 150 ASLSVDYIAVAILNEPKELAFCKKGAEAWTIIEDADNYCEDVIYYNGLFYAVNKRGCLAV 209
Query: 181 FSIHDPTQVVDIKV----ANVHERRPSSIESTLYLVGQDDELLMVERLFGRKLIQFSGQG 240
+ + VV + N R ++ YLV ELL V R +
Sbjct: 210 CDVSGDSPVVRVIKPLYRGNFIYRGSILLKHIHYLVDSFGELLFVTRNLKFVMDIEPNTR 269
Query: 241 RYKTLTFNLYKLNWVENSAMWSKIYSLDGYSIFLGLNTSLCISSKDCPRLKSNQIFYTND 300
+KT+ F + +L+ W ++ SL + +FLG N+SLC S+ D P + N I++T+
Sbjct: 270 VHKTVGFEISRLD-SSRRPKWVEVKSLGNHVLFLGGNSSLCSSATDLPGCEGNCIYFTDY 329
Query: 301 GTELDNRGRFCGNDFGVYNVREGICKNLLGNYGYPSHQYVWPNPIWVVLNPC 339
++++N G+ D GV+NV +G K L GY S ++ P PIWV+ NPC
Sbjct: 330 DSKVNNDGKRPTQDSGVFNVGDGSIKPLPYCDGY-SRLFL-PPPIWVITNPC 375
BLAST of MC09g0892 vs. ExPASy TrEMBL
Match:
A0A6J1DUW8 (putative F-box protein At4g17565 OS=Momordica charantia OX=3673 GN=LOC111023713 PE=4 SV=1)
HSP 1 Score: 386 bits (991), Expect = 4.45e-129
Identity = 199/310 (64.19%), Postives = 232/310 (74.84%), Query Frame = 0
Query: 1 FQAVRASYGSVLPKWPKHEYYQVPGLMIPSKVCTTSSLFTGFFNPLNNEIYCRDLGGVSG 60
F+AV AS S LPKWPKH+YYQVP LMIP KVC SSLF GFFNPLN EIYC DL VSG
Sbjct: 31 FRAVCASCRSTLPKWPKHQYYQVPRLMIPHKVC--SSLFRGFFNPLNQEIYCPDLSEVSG 90
Query: 61 PCLGSSNGWLVVLENYWKLKLFNPITKSQFQLPPTTN--------------NHQNHVRMA 120
CLGSSNGWLV+L+N W LKLFNP+TK Q QLP T++ +HQ V +A
Sbjct: 91 RCLGSSNGWLVLLDNSWTLKLFNPLTKLQLQLPSTSSFPDPYLIYNPNGRIDHQTDVPVA 150
Query: 121 YVHKVVVLPCNDNFVALAIHDVLSNLAFAKLADDKWTTIPTSDVSDCIFFREKISAVTKL 180
YVHK+ +L D+F+A+AI++V S +AF KL DDKWT IPTSD+ DCI F EKI A+TK
Sbjct: 151 YVHKICLLHSKDHFIAVAIYNVFSKIAFTKLGDDKWTAIPTSDICDCILFHEKIYALTKF 210
Query: 181 GDLVVFSIHDPTQVVDIKVANVHE--RRPSSIESTLYLVGQDDELLMVERLFGRKLIQFS 240
DLVV I DPTQV IKV N++ R+ SIESTLYLVG+DDELLMVERLF + +Q
Sbjct: 211 QDLVVSPIDDPTQVAGIKVKNMNVIMRQRLSIESTLYLVGRDDELLMVERLFKVQHVQLR 270
Query: 241 GQGRY--KTLTFNLYKLNWVENSAMWSKIYSLDGYSIFLGLNTSLCISSKDCPRLKSNQI 292
G+ Y KT+ FNLYKL+WVE+ A WSKIY+LDG SIFLGLNTSLCISSKDCP+L+ NQI
Sbjct: 271 GKTSYASKTVGFNLYKLDWVESRATWSKIYNLDGCSIFLGLNTSLCISSKDCPKLRGNQI 330
BLAST of MC09g0892 vs. ExPASy TrEMBL
Match:
A0A6J1DP54 (F-box protein SKIP23-like OS=Momordica charantia OX=3673 GN=LOC111022516 PE=4 SV=1)
HSP 1 Score: 242 bits (618), Expect = 9.57e-74
Identity = 160/378 (42.33%), Postives = 217/378 (57.41%), Query Frame = 0
Query: 1 FQAVRASYGSVLPKWPKHEYYQVPGLMIPSKVCTTSSLFTGFFNPLNNEIYCRDLGGVSG 60
F+AVR S+G VLP+ P+H YY +P LMIP + GF+N LN ++Y +L ++
Sbjct: 28 FRAVRRSWGRVLPRQPRHSYYNIPCLMIPYHPHNDN--LRGFYNVLNQQVYYLELPQLTN 87
Query: 61 P-CLGSSNGWLVVLENYWKLKLFNPITKSQFQLPPTTN---------NHQNH-------- 120
+GSS GWLV L+N L+L NP+TKSQ QLPP ++ N+Q
Sbjct: 88 QKYIGSSKGWLVTLDNGLTLQLLNPLTKSQLQLPPISSFPGIIGYDPNNQGEEYTLLRPM 147
Query: 121 ----------VRMAYVHKVVV---LPCNDNFVALAIHDVLSNLAFAKLADDKWTTIPTS- 180
V Y+ K+V+ P ND F+A+AI+D LAF K DDKWT I TS
Sbjct: 148 DKINTKSRARVHGEYIRKIVLSSLAPSND-FMAVAIYDSSDKLAFTKFGDDKWTAISTSL 207
Query: 181 -DVSDCIFFREKISAVTKLGDLVVFSIHD-PTQVVDIKVANVHERRPS-SIESTLYLVGQ 240
+ DCI+F KI AV LGDL V SI PTQ+V++ + +RP + S LYLV
Sbjct: 208 NNFHDCIYFDGKIYAVNVLGDLGVCSIDGTPTQLVNLPL-----KRPKLEVTSKLYLVET 267
Query: 241 DDELLMVERLFGRKLIQFSGQGR----YKTLTFNLYKLNWVENSAMWSKIYSLDGYSIFL 300
+ ++LMVERL K + +GR YKT+ FNL+K + S W KI +LDG +IFL
Sbjct: 268 NGDMLMVERL--SKYMALFNRGRRCYGYKTIGFNLFKFD----SEGWLKIENLDGCTIFL 327
Query: 301 GLNTSLCISSKDCPRLKSNQIFYTNDGTELDNR--GRFCGNDFGVYNVREGICKNLLGNY 337
GLNTS+CISSK CP+L+ N I+YT D + + G DFGV+++ + + L +
Sbjct: 328 GLNTSICISSKSCPKLRGNHIYYTFDHEKEPAQVIGSHACYDFGVFDMTDRSRRCLW--H 387
BLAST of MC09g0892 vs. ExPASy TrEMBL
Match:
A0A6J1DRH7 (F-box protein SKIP23-like OS=Momordica charantia OX=3673 GN=LOC111022508 PE=4 SV=1)
HSP 1 Score: 224 bits (572), Expect = 2.97e-67
Identity = 155/376 (41.22%), Postives = 207/376 (55.05%), Query Frame = 0
Query: 1 FQAVRASYGSVLPKWPKHEYYQVPGLMIPSKVCTTSSLFTGFFNPLNNEIYCRDLGGVSG 60
F+AVR S+G VLP+ P+H YY +P LMIP + GF+N LN ++Y +L ++
Sbjct: 28 FRAVRRSWGHVLPRQPRHSYYNIPCLMIPYH--PHNGNLRGFYNVLNQQVYYLELPQLTN 87
Query: 61 P-CLGSSNGWLVVLENYWKLKLFNPITKSQFQLPPTTN---------NHQNH-------- 120
+GSS GWLV L+N L+L NP+TKSQ QLPPT++ N+Q
Sbjct: 88 QKYIGSSKGWLVTLDNGLTLQLLNPLTKSQLQLPPTSSFPGIIGYDPNNQGEEYTLLRPM 147
Query: 121 ----------VRMAYVHKVVV---LPCNDNFVALAIHDVLSNLAFAKLADDKWTTIPTS- 180
V Y+ K+V+ P ND F+A+AI+D LAF K DDKWT I TS
Sbjct: 148 DKINTKSRARVHGEYIRKIVLSSLAPSND-FMAVAIYDSSDKLAFTKFGDDKWTAISTSL 207
Query: 181 -DVSDCIFFREKISAVTKLGDLVVFSIHD-PTQVVDIKVANVHERRPS-SIESTLYLVGQ 240
+ DCI+F KI AV LGDL V SI D PTQ+V++ + +RP + S LY+V
Sbjct: 208 NNFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPL-----KRPKLEVTSKLYMVET 267
Query: 241 DDELLMVERLFGRKLIQFSGQGR----YKTLTFNLYKLNWVENSAMWSKIYSLDGYSIFL 300
+ +LLMVERL K + +GR YKT+ FNL+KL+ S W KI +LDG +IFL
Sbjct: 268 NGDLLMVERL--SKYMALFNRGRRCYGYKTIGFNLFKLD----SDGWLKIENLDGCTIFL 327
Query: 301 GLNTSLCISSKDCPRLKSNQIFYTNDGTELDNRGRFCGNDFGVYNVREGICKNLLGNYGY 337
GLNTS+CISSK CP+L+ +R R C ++ +
Sbjct: 328 GLNTSMCISSKSCPKLR--------------DRSRRC-----LW-------------HDD 357
BLAST of MC09g0892 vs. ExPASy TrEMBL
Match:
A0A2N9ERJ5 (DUF295 domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS9328 PE=4 SV=1)
HSP 1 Score: 152 bits (385), Expect = 3.65e-39
Identity = 119/382 (31.15%), Postives = 187/382 (48.95%), Query Frame = 0
Query: 2 QAVRASYGSVLPKWPKHEYYQVPGLMIPSK---VCTTSSLFTGFFNPLNNEIYCRDLGGV 61
+ V +S+ S L K P H+ Q+P L+IP K + T++S GF +PL +++ +L +
Sbjct: 31 RCVCSSWHSDLSKMPNHKLCQLPWLLIPYKDNVIGTSTSSSCGFLDPLEKKVHKLELPEI 90
Query: 62 SGPCL-GSSNGWLVVLENYWKLKLFNPITKSQFQLPPTT----------NNHQN------ 121
GS+ GW+VV + L NP+T+++ +LPP + + H++
Sbjct: 91 GEKVFKGSAYGWVVVANKNDTIYLVNPLTRARVKLPPRSKFPDVRKYRADKHESEYLLWS 150
Query: 122 ----------------HVRMAYVHKVVVLPCNDN---FVALAIHDVLSNLAFAKLADDKW 181
HVR + K+V+ N FVA+AI+ + +LA+ K D KW
Sbjct: 151 LTALSTPGDSYLMDTTHVRNYLLTKIVLSSSPSNGSDFVAVAIYGEIGSLAYCKRGDKKW 210
Query: 182 TTIPTS--DVSDCIFFREKISAVTKLGDLVVFSIHD--PTQVVDIKVANVHERRPSSIE- 241
+ I D IF+ ++ A+ G L+V I P +V V +PS+
Sbjct: 211 SIISDKRPPYKDVIFYEGQLYALKCSGQLMVCDIGSNYPKPIVTEVVP-----QPSTYPL 270
Query: 242 STLYLVGQDDELLMVERLFGRKLI-QFSGQGRYKTLTFNLYKLNWVENSAMWSKIYSLDG 301
LYLVG L+MV+R F I + S +KT TF ++KL+ + W ++ SL
Sbjct: 271 GELYLVGSSSGLMMVQRWFESSYIYEPSKIFVHKTKTFKIFKLD--ISGRNWYRVKSLGD 330
Query: 302 YSIFLGLNTSLCISSKDCPRLKSNQIFYTNDGTELDNRGRFCGNDFGVYNVREGICKNLL 338
+FLGLN+S+ SS+D P K N I++T+ D G G D G++++ +G + L
Sbjct: 331 DVMFLGLNSSMAFSSRDFPVYKGNSIYFTDVNYNFDLEGTRIGFDEGIFSLDDGKIEPLP 390
BLAST of MC09g0892 vs. ExPASy TrEMBL
Match:
A0A200QK86 (DUF295 domain-containing protein OS=Macleaya cordata OX=56857 GN=BVC80_8879g1 PE=4 SV=1)
HSP 1 Score: 151 bits (382), Expect = 5.85e-39
Identity = 118/352 (33.52%), Postives = 180/352 (51.14%), Query Frame = 0
Query: 1 FQAVRASYGSVLPKWPKHEYYQVPGLMIPSKVCTTSSLFTGFFNPLNNEIYCRDLGGV-S 60
F+AV + S LP P H Q+P LM+P + SS GFFN N++Y +L + S
Sbjct: 30 FRAVCVKWCSTLPPIPHHLPCQLPWLMLPHN--SNSSNRRGFFNLSENKVYWLNLPEICS 89
Query: 61 GP-CLGSSNGWLVVL-ENYWKLKLFNPITKSQFQLPPTTNNHQNHVRMAYVHKVVV---- 120
G C GSS GW+V+L ++ + LFNP+T+ Q QLPP N + + ++ KVV+
Sbjct: 90 GSRCCGSSQGWVVLLLQHSPNILLFNPLTRVQLQLPPFRLNMIDPC-LLFIKKVVLSSSP 149
Query: 121 LPCNDNFVALAIHDVLSNLAFAKLADDKWTTIPTSD--VSDCIFFREKISAVTKLGDLVV 180
+ +++A+AI + LAF K + WT I +D D I++ AV K G L V
Sbjct: 150 ASLSVDYIAVAILNEPKELAFCKKGAEAWTIIEDADNYCEDVIYYNGLFYAVNKRGCLAV 209
Query: 181 FSIHDPTQVVDIKV----ANVHERRPSSIESTLYLVGQDDELLMVERLFGRKLIQFSGQG 240
+ + VV + N R ++ YLV ELL V R +
Sbjct: 210 CDVSGDSPVVRVIKPLYRGNFIYRGSILLKHIHYLVDSFGELLFVTRNLKFVMDIEPNTR 269
Query: 241 RYKTLTFNLYKLNWVENSAMWSKIYSLDGYSIFLGLNTSLCISSKDCPRLKSNQIFYTND 300
+KT+ F + +L+ W ++ SL + +FLG N+SLC S+ D P + N I++T+
Sbjct: 270 VHKTVGFEISRLD-SSRRPKWVEVKSLGNHVLFLGGNSSLCSSATDLPGCEGNCIYFTDY 329
Query: 301 GTELDNRGRFCGNDFGVYNVREGICKNLLGNYGYPSHQYVWPNPIWVVLNPC 339
++++N G+ D GV+NV +G K L GY S ++ P PIWV+ NPC
Sbjct: 330 DSKVNNDGKRPTQDSGVFNVGDGSIKPLPYCDGY-SRLFL-PPPIWVITNPC 375
BLAST of MC09g0892 vs. TAIR 10
Match:
AT2G05970.1 (F-box family protein with a domain of unknown function (DUF295) )
HSP 1 Score: 42.4 bits (98), Expect = 8.7e-04
Identity = 52/260 (20.00%), Postives = 101/260 (38.85%), Query Frame = 0
Query: 55 LGGVSGPCLGSSNGWLVVLENYWKLKLFNPITKSQFQLPPTTNNHQNHVRMAYVHKVVVL 114
+G + CL + W+++++ L + NP+T + LP T + L
Sbjct: 92 VGFMLSNCLATYGSWILMMDRLCNLNILNPLTGEKIDLPRTKFD---------------L 151
Query: 115 PCNDNFVA-----------LAIHDVLSNLAFAKLADDKWTTIPTSD----VSDCIFFREK 174
P ++ VA + + + ++L +AK + W + + + V ++ +
Sbjct: 152 PRLESSVACLWIDEKTKDYIVVWKIKNSLVYAKKGNHTWQQVFSMNEELSVEQIVYEHKT 211
Query: 175 ISAVTKLGDLVV----FSIHDPTQVVDIKVANVHERRPSSIESTLYLVGQ--DDELLMVE 234
D + S DP V + + P +L + D+EL + E
Sbjct: 212 QKLYVHFNDSTLSIWRLSREDPHGVFENYI-------PFDFVFQDFLPDRRTDEELYVKE 271
Query: 235 RLFGRKLIQFSGQG----------RYKTLTFNLYKLNWVENSAMWSKIYSLDGYSIFLGL 284
+ R I + G + K F +YK+N+++ W +I SL ++ L +
Sbjct: 272 YIDTRLNIALTTSGELLKVASVVQKSKRWLFRIYKMNYIKR--RWERIESLGDEALILDM 325
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DUW8 | 4.45e-129 | 64.19 | putative F-box protein At4g17565 OS=Momordica charantia OX=3673 GN=LOC111023713 ... | [more] |
A0A6J1DP54 | 9.57e-74 | 42.33 | F-box protein SKIP23-like OS=Momordica charantia OX=3673 GN=LOC111022516 PE=4 SV... | [more] |
A0A6J1DRH7 | 2.97e-67 | 41.22 | F-box protein SKIP23-like OS=Momordica charantia OX=3673 GN=LOC111022508 PE=4 SV... | [more] |
A0A2N9ERJ5 | 3.65e-39 | 31.15 | DUF295 domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS9328 PE... | [more] |
A0A200QK86 | 5.85e-39 | 33.52 | DUF295 domain-containing protein OS=Macleaya cordata OX=56857 GN=BVC80_8879g1 PE... | [more] |
Match Name | E-value | Identity | Description | |
AT2G05970.1 | 8.7e-04 | 20.00 | F-box family protein with a domain of unknown function (DUF295) | [more] |